RNA–Protein interactions for RNA: ENST00000482448.1

NSMF-209, Transcript of NMDA receptor synaptonuclear signaling and neuronal migration factor, humanhuman

TSL 3

Gene NSMF, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMF-209ENST00000482448 NISCHQ9Y2I1 1504 aa27.02■■□□□ 1.92
NSMF-209ENST00000482448 CCDC180Q9P1Z9 1646 aa24.17■■□□□ 1.46
NSMF-209ENST00000482448 ABCC9O60706 1549 aa23.67■■□□□ 1.38
NSMF-209ENST00000482448 RB1CC1Q8TDY2 1594 aa22.76■■□□□ 1.23
NSMF-209ENST00000482448 NACADO15069 1562 aa22.7■■□□□ 1.22
NSMF-209ENST00000482448 MYO15BQ96JP2 1530 aa22.54■■□□□ 1.2
NSMF-209ENST00000482448 ZCCHC6Q5VYS8 1495 aaKnown RBP22.53■■□□□ 1.2
NSMF-209ENST00000482448 DCAF8L2P0C7V8 631 aa22.41■■□□□ 1.18
NSMF-209ENST00000482448 DCAF1Q9Y4B6 1507 aa22.39■■□□□ 1.17
NSMF-209ENST00000482448 UNC13AQ9UPW8 1703 aa22.3■■□□□ 1.16
NSMF-209ENST00000482448 BICRAQ9NZM4 1560 aa22.11■■□□□ 1.13
NSMF-209ENST00000482448 PABPN1Q86U42 306 aaKnown RBP eCLIP22.01■■□□□ 1.113e-9■■□□□ 14.4
NSMF-209ENST00000482448 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
NSMF-209ENST00000482448 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
NSMF-209ENST00000482448 DNAJC5BQ9UF47 199 aa21.79■■□□□ 1.08
NSMF-209ENST00000482448 EIF4G1Q04637 1599 aaKnown RBP21.53■■□□□ 1.04
NSMF-209ENST00000482448 CC2D2AQ9P2K1 1620 aa21.45■■□□□ 1.02
NSMF-209ENST00000482448 CECR2Q9BXF3 1484 aa21.3■■□□□ 1
NSMF-209ENST00000482448 SMARCA4P51532 1647 aa21.04■□□□□ 0.96
NSMF-209ENST00000482448 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
NSMF-209ENST00000482448 NCAPD3P42695 1498 aa20.92■□□□□ 0.94
NSMF-209ENST00000482448 SMARCA2P51531 1590 aa20.91■□□□□ 0.94
NSMF-209ENST00000482448 ATAD2BQ9ULI0 1458 aa20.91■□□□□ 0.94
NSMF-209ENST00000482448 HMGXB3Q12766 1538 aa20.87■□□□□ 0.93
NSMF-209ENST00000482448 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
NSMF-209ENST00000482448 MROH2BQ7Z745 1585 aa20.81■□□□□ 0.92
NSMF-209ENST00000482448 BAZ1BQ9UIG0 1483 aaKnown RBP20.74■□□□□ 0.91
NSMF-209ENST00000482448 WIZO95785 1651 aa20.59■□□□□ 0.89
NSMF-209ENST00000482448 RSF1Q96T23 1441 aaPredicted RBP20.5■□□□□ 0.87
NSMF-209ENST00000482448 NESP48681 1621 aa20.45■□□□□ 0.87
NSMF-209ENST00000482448 LAMC3Q9Y6N6 1575 aa20.43■□□□□ 0.86
NSMF-209ENST00000482448 ERCC6Q03468 1493 aa20.42■□□□□ 0.86
NSMF-209ENST00000482448 TOP2AP11388 1531 aaKnown RBP20.4■□□□□ 0.86
NSMF-209ENST00000482448 CUX2O14529 1486 aa20.3■□□□□ 0.84
NSMF-209ENST00000482448 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
NSMF-209ENST00000482448 THOC2Q8NI27 1593 aaKnown RBP20.28■□□□□ 0.84
NSMF-209ENST00000482448 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
NSMF-209ENST00000482448 PDS5BQ9NTI5 1447 aa20.23■□□□□ 0.83
NSMF-209ENST00000482448 CFTRP13569 1480 aa20.16■□□□□ 0.82
NSMF-209ENST00000482448 PRDM2Q13029 1718 aa20.1■□□□□ 0.81
NSMF-209ENST00000482448 CCDC88BA6NC98 1476 aa20.08■□□□□ 0.81
NSMF-209ENST00000482448 MRC2Q9UBG0 1479 aa20.08■□□□□ 0.81
NSMF-209ENST00000482448 CEP164Q9UPV0 1460 aa20.07■□□□□ 0.8
NSMF-209ENST00000482448 FANCD2Q9BXW9 1451 aa20.06■□□□□ 0.8
NSMF-209ENST00000482448 WDR62O43379 1518 aa20.06■□□□□ 0.8
NSMF-209ENST00000482448 URB2Q14146 1524 aaKnown RBP19.9■□□□□ 0.78
NSMF-209ENST00000482448 TOPBP1Q92547 1522 aa19.74■□□□□ 0.75
NSMF-209ENST00000482448 DNMBPQ6XZF7 1577 aa19.74■□□□□ 0.75
NSMF-209ENST00000482448 SUPT5HO00267 1087 aaKnown RBP19.73■□□□□ 0.75
NSMF-209ENST00000482448 DNAJC5Q9H3Z4 198 aa19.73■□□□□ 0.75
NSMF-209ENST00000482448 ABCC8Q09428 1581 aa19.7■□□□□ 0.74
NSMF-209ENST00000482448 IFT140Q96RY7 1462 aa19.65■□□□□ 0.74
NSMF-209ENST00000482448 POLA1P09884 1462 aaPredicted RBP19.58■□□□□ 0.72
NSMF-209ENST00000482448 TARBP1Q13395 1621 aaKnown RBP19.58■□□□□ 0.72
NSMF-209ENST00000482448 ZNF608Q9ULD9 1512 aaPredicted RBP19.56■□□□□ 0.72
NSMF-209ENST00000482448 EIF4G3O43432 1585 aaKnown RBP19.56■□□□□ 0.72
NSMF-209ENST00000482448 CUX1P39880 1505 aa19.56■□□□□ 0.72
NSMF-209ENST00000482448 FGD5Q6ZNL6 1462 aa19.49■□□□□ 0.71
NSMF-209ENST00000482448 RAD54L2Q9Y4B4 1467 aa19.45■□□□□ 0.7
NSMF-209ENST00000482448 WDR97A6NE52 1622 aa19.44■□□□□ 0.7
NSMF-209ENST00000482448 SOGA1O94964 1423 aa19.41■□□□□ 0.7
NSMF-209ENST00000482448 AQRO60306 1485 aaKnown RBP eCLIP19.4■□□□□ 0.75e-24■■■■■ 62.4
NSMF-209ENST00000482448 BIVM-ERCC5R4GMW8 1640 aa19.39■□□□□ 0.69
NSMF-209ENST00000482448 TOP2BQ02880 1626 aa19.36■□□□□ 0.69
NSMF-209ENST00000482448 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
NSMF-209ENST00000482448 WRNQ14191 1432 aaPredicted RBP eCLIP19.33■□□□□ 0.68
NSMF-209ENST00000482448 CHD1O14646 1710 aa19.32■□□□□ 0.68
NSMF-209ENST00000482448 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
NSMF-209ENST00000482448 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
NSMF-209ENST00000482448 ABCA5Q8WWZ7 1642 aa19.3■□□□□ 0.68
NSMF-209ENST00000482448 PBRM1Q86U86 1689 aa19.29■□□□□ 0.68
NSMF-209ENST00000482448 OSCARQ8IYS5 282 aa19.28■□□□□ 0.68
NSMF-209ENST00000482448 SNAPC4Q5SXM2 1469 aa19.27■□□□□ 0.67
NSMF-209ENST00000482448 GRIN2BQ13224 1484 aa19.26■□□□□ 0.67
NSMF-209ENST00000482448 MAGI1Q96QZ7 1491 aaPredicted RBP19.24■□□□□ 0.67
NSMF-209ENST00000482448 GAPVD1Q14C86 1478 aa19.22■□□□□ 0.67
NSMF-209ENST00000482448 SYNJ2O15056 1496 aa19.16■□□□□ 0.66
NSMF-209ENST00000482448 RIMBP3CA6NJZ7 1639 aa19.14■□□□□ 0.66
NSMF-209ENST00000482448 RIMBP3BA6NNM3 1639 aa19.14■□□□□ 0.66
NSMF-209ENST00000482448 RIMBP3Q9UFD9 1639 aa19.14■□□□□ 0.66
NSMF-209ENST00000482448 ADAMTS12P58397 1594 aa19.13■□□□□ 0.65
NSMF-209ENST00000482448 ARHGEF11O15085 1522 aa19.12■□□□□ 0.65
NSMF-209ENST00000482448 CLASP1Q7Z460 1538 aa19.12■□□□□ 0.65
NSMF-209ENST00000482448 FBLN2P98095 1184 aa19.1■□□□□ 0.65
NSMF-209ENST00000482448 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
NSMF-209ENST00000482448 CHMP7Q8WUX9 453 aaPredicted RBP19.05■□□□□ 0.64
NSMF-209ENST00000482448 GRIN2AQ12879 1464 aa19.03■□□□□ 0.64
NSMF-209ENST00000482448 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
NSMF-209ENST00000482448 TRIM41Q8WV44 630 aa18.99■□□□□ 0.63
NSMF-209ENST00000482448 CEP170Q5SW79 1584 aa18.97■□□□□ 0.63
NSMF-209ENST00000482448 NUP160Q12769 1436 aa18.96■□□□□ 0.63
NSMF-209ENST00000482448 ARAP1Q96P48 1450 aa18.96■□□□□ 0.63
NSMF-209ENST00000482448 KIF27Q86VH2 1401 aa18.92■□□□□ 0.62
NSMF-209ENST00000482448 CUL7Q14999 1698 aa18.91■□□□□ 0.62
NSMF-209ENST00000482448 SHROOM2Q13796 1616 aa18.88■□□□□ 0.61
NSMF-209ENST00000482448 RUSC2Q8N2Y8 1516 aa18.86■□□□□ 0.61
NSMF-209ENST00000482448 IGF1RP08069 1367 aa18.83■□□□□ 0.61
NSMF-209ENST00000482448 ERCC6L2Q5T890 1561 aa18.81■□□□□ 0.6
NSMF-209ENST00000482448 CYB5RLQ6IPT4 315 aa18.8■□□□□ 0.6
NSMF-209ENST00000482448 CARMIL1Q5VZK9 1371 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms