RNA–Protein interactions for RNA: ENST00000482395.1

TRA2A-206, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-206ENST00000482395 NISCHQ9Y2I1 1504 aa51.12■■■■■ 5.77
TRA2A-206ENST00000482395 CCDC180Q9P1Z9 1646 aa45.77■■■■■ 4.92
TRA2A-206ENST00000482395 ABCC9O60706 1549 aa44.96■■■■■ 4.79
TRA2A-206ENST00000482395 RB1CC1Q8TDY2 1594 aa43.22■■■■■ 4.51
TRA2A-206ENST00000482395 NACADO15069 1562 aa43.07■■■■■ 4.49
TRA2A-206ENST00000482395 MYO15BQ96JP2 1530 aa42.72■■■■■ 4.43
TRA2A-206ENST00000482395 DCAF8L2P0C7V8 631 aa42.7■■■■■ 4.43
TRA2A-206ENST00000482395 ZCCHC6Q5VYS8 1495 aaKnown RBP42.51■■■■■ 4.4
TRA2A-206ENST00000482395 DCAF1Q9Y4B6 1507 aa42.37■■■■■ 4.37
TRA2A-206ENST00000482395 UNC13AQ9UPW8 1703 aa42.26■■■■■ 4.36
TRA2A-206ENST00000482395 BICRAQ9NZM4 1560 aa41.85■■■■■ 4.29
TRA2A-206ENST00000482395 PABPN1Q86U42 306 aaKnown RBP eCLIP41.85■■■■■ 4.29
TRA2A-206ENST00000482395 SCRIBQ14160 1630 aa41.57■■■■■ 4.25
TRA2A-206ENST00000482395 SHROOM4Q9ULL8 1493 aa41.53■■■■■ 4.24
TRA2A-206ENST00000482395 DNAJC5BQ9UF47 199 aa41.52■■■■■ 4.24
TRA2A-206ENST00000482395 EIF4G1Q04637 1599 aaKnown RBP40.81■■■■■ 4.12
TRA2A-206ENST00000482395 CC2D2AQ9P2K1 1620 aa40.73■■■■■ 4.11
TRA2A-206ENST00000482395 CECR2Q9BXF3 1484 aa40.49■■■■■ 4.07
TRA2A-206ENST00000482395 SMARCA4P51532 1647 aa39.79■■■■□ 3.96
TRA2A-206ENST00000482395 BAZ1AQ9NRL2 1556 aaPredicted RBP39.71■■■■□ 3.95
TRA2A-206ENST00000482395 NCAPD3P42695 1498 aa39.69■■■■□ 3.94
TRA2A-206ENST00000482395 SMARCA2P51531 1590 aa39.64■■■■□ 3.94
TRA2A-206ENST00000482395 ATAD2BQ9ULI0 1458 aa39.62■■■■□ 3.93
TRA2A-206ENST00000482395 HMGXB3Q12766 1538 aa39.52■■■■□ 3.92
TRA2A-206ENST00000482395 PEG3Q9GZU2 1588 aa39.45■■■■□ 3.91
TRA2A-206ENST00000482395 MROH2BQ7Z745 1585 aa39.33■■■■□ 3.89
TRA2A-206ENST00000482395 BAZ1BQ9UIG0 1483 aaKnown RBP39.3■■■■□ 3.88
TRA2A-206ENST00000482395 WIZO95785 1651 aa38.93■■■■□ 3.82
TRA2A-206ENST00000482395 ERCC6Q03468 1493 aa38.85■■■■□ 3.81
TRA2A-206ENST00000482395 LAMC3Q9Y6N6 1575 aa38.78■■■■□ 3.8
TRA2A-206ENST00000482395 NESP48681 1621 aa38.77■■■■□ 3.8
TRA2A-206ENST00000482395 RSF1Q96T23 1441 aaPredicted RBP38.72■■■■□ 3.79
TRA2A-206ENST00000482395 CUX2O14529 1486 aa38.66■■■■□ 3.78
TRA2A-206ENST00000482395 TOP2AP11388 1531 aaKnown RBP38.53■■■■□ 3.76
TRA2A-206ENST00000482395 PDS5BQ9NTI5 1447 aa38.48■■■■□ 3.75
TRA2A-206ENST00000482395 CADPSQ9ULU8 1353 aa38.48■■■■□ 3.75
TRA2A-206ENST00000482395 KIF21AQ7Z4S6 1674 aa38.43■■■■□ 3.74
TRA2A-206ENST00000482395 THOC2Q8NI27 1593 aaKnown RBP38.4■■■■□ 3.74
TRA2A-206ENST00000482395 CFTRP13569 1480 aa38.19■■■■□ 3.7
TRA2A-206ENST00000482395 MRC2Q9UBG0 1479 aa38.09■■■■□ 3.69
TRA2A-206ENST00000482395 CEP164Q9UPV0 1460 aa38.08■■■■□ 3.69
TRA2A-206ENST00000482395 FANCD2Q9BXW9 1451 aa38.05■■■■□ 3.68
TRA2A-206ENST00000482395 PRDM2Q13029 1718 aa38.04■■■■□ 3.68
TRA2A-206ENST00000482395 WDR62O43379 1518 aa38.02■■■■□ 3.68
TRA2A-206ENST00000482395 CCDC88BA6NC98 1476 aa38■■■■□ 3.67
TRA2A-206ENST00000482395 DNAJC5Q9H3Z4 198 aa37.84■■■■□ 3.65
TRA2A-206ENST00000482395 URB2Q14146 1524 aaKnown RBP37.67■■■■□ 3.62
TRA2A-206ENST00000482395 ABCC8Q09428 1581 aa37.46■■■■□ 3.59
TRA2A-206ENST00000482395 TOPBP1Q92547 1522 aa37.4■■■■□ 3.58
TRA2A-206ENST00000482395 DNMBPQ6XZF7 1577 aa37.37■■■■□ 3.57
TRA2A-206ENST00000482395 SUPT5HO00267 1087 aaKnown RBP37.33■■■■□ 3.57
TRA2A-206ENST00000482395 IFT140Q96RY7 1462 aa37.3■■■■□ 3.56
TRA2A-206ENST00000482395 ZNF608Q9ULD9 1512 aaPredicted RBP37.06■■■■□ 3.52
TRA2A-206ENST00000482395 TARBP1Q13395 1621 aaKnown RBP37.06■■■■□ 3.52
TRA2A-206ENST00000482395 POLA1P09884 1462 aaPredicted RBP37.05■■■■□ 3.52
TRA2A-206ENST00000482395 EIF4G3O43432 1585 aaKnown RBP37.01■■■■□ 3.52
TRA2A-206ENST00000482395 CUX1P39880 1505 aa36.94■■■■□ 3.5
TRA2A-206ENST00000482395 FGD5Q6ZNL6 1462 aa36.89■■■■□ 3.5
TRA2A-206ENST00000482395 OSCARQ8IYS5 282 aa36.88■■■■□ 3.49
TRA2A-206ENST00000482395 WDR97A6NE52 1622 aa36.87■■■■□ 3.49
TRA2A-206ENST00000482395 SOGA1O94964 1423 aa36.86■■■■□ 3.49
TRA2A-206ENST00000482395 RAD54L2Q9Y4B4 1467 aa36.82■■■■□ 3.49
TRA2A-206ENST00000482395 AQRO60306 1485 aaKnown RBP eCLIP36.8■■■■□ 3.483e-12■■■■□ 23.5
TRA2A-206ENST00000482395 CHD1O14646 1710 aa36.65■■■■□ 3.46
TRA2A-206ENST00000482395 TDRD9Q8NDG6 1382 aaKnown RBP36.65■■■■□ 3.46
TRA2A-206ENST00000482395 BIVM-ERCC5R4GMW8 1640 aa36.62■■■■□ 3.45
TRA2A-206ENST00000482395 TOP2BQ02880 1626 aa36.59■■■■□ 3.45
TRA2A-206ENST00000482395 WRNQ14191 1432 aaPredicted RBP eCLIP36.57■■■■□ 3.44
TRA2A-206ENST00000482395 ABCA10Q8WWZ4 1543 aa36.55■■■■□ 3.44
TRA2A-206ENST00000482395 GRIN2BQ13224 1484 aa36.53■■■■□ 3.44
TRA2A-206ENST00000482395 MAGI1Q96QZ7 1491 aaPredicted RBP36.51■■■■□ 3.44
TRA2A-206ENST00000482395 PBRM1Q86U86 1689 aa36.51■■■■□ 3.43
TRA2A-206ENST00000482395 SNAPC4Q5SXM2 1469 aa36.5■■■■□ 3.43
TRA2A-206ENST00000482395 SYNJ1O43426 1573 aa36.49■■■■□ 3.43
TRA2A-206ENST00000482395 ABCA5Q8WWZ7 1642 aa36.47■■■■□ 3.43
TRA2A-206ENST00000482395 GAPVD1Q14C86 1478 aa36.46■■■■□ 3.43
TRA2A-206ENST00000482395 FBLN2P98095 1184 aa36.41■■■■□ 3.42
TRA2A-206ENST00000482395 RIMBP3CA6NJZ7 1639 aa36.39■■■■□ 3.42
TRA2A-206ENST00000482395 RIMBP3BA6NNM3 1639 aa36.39■■■■□ 3.42
TRA2A-206ENST00000482395 RIMBP3Q9UFD9 1639 aa36.39■■■■□ 3.42
TRA2A-206ENST00000482395 SYNJ2O15056 1496 aa36.35■■■■□ 3.41
TRA2A-206ENST00000482395 TRIM41Q8WV44 630 aa36.33■■■■□ 3.41
TRA2A-206ENST00000482395 ARHGEF11O15085 1522 aa36.33■■■■□ 3.41
TRA2A-206ENST00000482395 CHMP7Q8WUX9 453 aaPredicted RBP36.3■■■■□ 3.4
TRA2A-206ENST00000482395 CLASP1Q7Z460 1538 aa36.22■■■■□ 3.39
TRA2A-206ENST00000482395 ERICH3Q5RHP9 1530 aa36.15■■■■□ 3.38
TRA2A-206ENST00000482395 ADAMTS12P58397 1594 aa36.15■■■■□ 3.38
TRA2A-206ENST00000482395 GRIN2AQ12879 1464 aa36.06■■■■□ 3.36
TRA2A-206ENST00000482395 FHAD1B1AJZ9 1412 aa36.04■■■■□ 3.36
TRA2A-206ENST00000482395 ARAP1Q96P48 1450 aa35.98■■■■□ 3.35
TRA2A-206ENST00000482395 NUP160Q12769 1436 aa35.91■■■■□ 3.34
TRA2A-206ENST00000482395 CYB5RLQ6IPT4 315 aa35.9■■■■□ 3.34
TRA2A-206ENST00000482395 CEP170Q5SW79 1584 aa35.89■■■■□ 3.34
TRA2A-206ENST00000482395 KIF27Q86VH2 1401 aa35.85■■■■□ 3.33
TRA2A-206ENST00000482395 CUL7Q14999 1698 aa35.78■■■■□ 3.32
TRA2A-206ENST00000482395 SHROOM2Q13796 1616 aa35.75■■■■□ 3.31
TRA2A-206ENST00000482395 IGF1RP08069 1367 aa35.69■■■■□ 3.3
TRA2A-206ENST00000482395 RUSC2Q8N2Y8 1516 aa35.62■■■■□ 3.29
TRA2A-206ENST00000482395 ERCC6L2Q5T890 1561 aa35.58■■■■□ 3.29
TRA2A-206ENST00000482395 CARMIL1Q5VZK9 1371 aa35.5■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms