RNA–Protein interactions for RNA: ENST00000482289.5

SFXN5-214, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 895 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-214ENST00000482289 NISCHQ9Y2I1 1504 aa49.5■■■■■ 5.52
SFXN5-214ENST00000482289 CCDC180Q9P1Z9 1646 aa44.21■■■■■ 4.67
SFXN5-214ENST00000482289 ABCC9O60706 1549 aa43.43■■■■■ 4.54
SFXN5-214ENST00000482289 RB1CC1Q8TDY2 1594 aa41.73■■■■■ 4.27
SFXN5-214ENST00000482289 NACADO15069 1562 aa41.61■■■■■ 4.25
SFXN5-214ENST00000482289 DCAF8L2P0C7V8 631 aa41.41■■■■■ 4.22
SFXN5-214ENST00000482289 MYO15BQ96JP2 1530 aa41.29■■■■■ 4.2
SFXN5-214ENST00000482289 ZCCHC6Q5VYS8 1495 aaKnown RBP41.18■■■■■ 4.18
SFXN5-214ENST00000482289 DCAF1Q9Y4B6 1507 aa41■■■■■ 4.15
SFXN5-214ENST00000482289 UNC13AQ9UPW8 1703 aa40.74■■■■■ 4.11
SFXN5-214ENST00000482289 PABPN1Q86U42 306 aaKnown RBP eCLIP40.49■■■■■ 4.07
SFXN5-214ENST00000482289 BICRAQ9NZM4 1560 aa40.42■■■■■ 4.06
SFXN5-214ENST00000482289 SCRIBQ14160 1630 aa40.24■■■■■ 4.03
SFXN5-214ENST00000482289 SHROOM4Q9ULL8 1493 aa40.07■■■■■ 4.01
SFXN5-214ENST00000482289 DNAJC5BQ9UF47 199 aa40.04■■■■■ 4
SFXN5-214ENST00000482289 EIF4G1Q04637 1599 aaKnown RBP39.4■■■■□ 3.9
SFXN5-214ENST00000482289 CC2D2AQ9P2K1 1620 aa39.3■■■■□ 3.88
SFXN5-214ENST00000482289 CECR2Q9BXF3 1484 aa39.08■■■■□ 3.85
SFXN5-214ENST00000482289 SMARCA4P51532 1647 aa38.49■■■■□ 3.75
SFXN5-214ENST00000482289 BAZ1AQ9NRL2 1556 aaPredicted RBP38.43■■■■□ 3.74
SFXN5-214ENST00000482289 NCAPD3P42695 1498 aa38.37■■■■□ 3.73
SFXN5-214ENST00000482289 ATAD2BQ9ULI0 1458 aa38.33■■■■□ 3.73
SFXN5-214ENST00000482289 SMARCA2P51531 1590 aa38.31■■■■□ 3.72
SFXN5-214ENST00000482289 HMGXB3Q12766 1538 aa38.17■■■■□ 3.7
SFXN5-214ENST00000482289 PEG3Q9GZU2 1588 aa38.14■■■■□ 3.7
SFXN5-214ENST00000482289 MROH2BQ7Z745 1585 aa38.12■■■■□ 3.69
SFXN5-214ENST00000482289 BAZ1BQ9UIG0 1483 aaKnown RBP38.02■■■■□ 3.68
SFXN5-214ENST00000482289 WIZO95785 1651 aa37.7■■■■□ 3.63
SFXN5-214ENST00000482289 RSF1Q96T23 1441 aaPredicted RBP37.58■■■■□ 3.61
SFXN5-214ENST00000482289 ERCC6Q03468 1493 aa37.5■■■■□ 3.59
SFXN5-214ENST00000482289 NESP48681 1621 aa37.47■■■■□ 3.59
SFXN5-214ENST00000482289 LAMC3Q9Y6N6 1575 aa37.43■■■■□ 3.58
SFXN5-214ENST00000482289 TOP2AP11388 1531 aaKnown RBP37.32■■■■□ 3.57
SFXN5-214ENST00000482289 CUX2O14529 1486 aa37.23■■■■□ 3.55
SFXN5-214ENST00000482289 CADPSQ9ULU8 1353 aa37.23■■■■□ 3.55
SFXN5-214ENST00000482289 PDS5BQ9NTI5 1447 aa37.19■■■■□ 3.54
SFXN5-214ENST00000482289 KIF21AQ7Z4S6 1674 aa37.07■■■■□ 3.52
SFXN5-214ENST00000482289 THOC2Q8NI27 1593 aaKnown RBP37.03■■■■□ 3.52
SFXN5-214ENST00000482289 CFTRP13569 1480 aa36.95■■■■□ 3.51
SFXN5-214ENST00000482289 CCDC88BA6NC98 1476 aa36.84■■■■□ 3.49
SFXN5-214ENST00000482289 FANCD2Q9BXW9 1451 aa36.8■■■■□ 3.48
SFXN5-214ENST00000482289 MRC2Q9UBG0 1479 aa36.8■■■■□ 3.48
SFXN5-214ENST00000482289 CEP164Q9UPV0 1460 aa36.8■■■■□ 3.48
SFXN5-214ENST00000482289 PRDM2Q13029 1718 aa36.71■■■■□ 3.47
SFXN5-214ENST00000482289 WDR62O43379 1518 aa36.69■■■■□ 3.46
SFXN5-214ENST00000482289 URB2Q14146 1524 aaKnown RBP36.44■■■■□ 3.42
SFXN5-214ENST00000482289 SUPT5HO00267 1087 aaKnown RBP36.38■■■■□ 3.41
SFXN5-214ENST00000482289 DNAJC5Q9H3Z4 198 aa36.36■■■■□ 3.41
SFXN5-214ENST00000482289 ABCC8Q09428 1581 aa36.22■■■■□ 3.39
SFXN5-214ENST00000482289 TOPBP1Q92547 1522 aa36.18■■■■□ 3.38
SFXN5-214ENST00000482289 DNMBPQ6XZF7 1577 aa36.14■■■■□ 3.38
SFXN5-214ENST00000482289 IFT140Q96RY7 1462 aa36.05■■■■□ 3.36
SFXN5-214ENST00000482289 ZNF608Q9ULD9 1512 aaPredicted RBP35.85■■■■□ 3.33
SFXN5-214ENST00000482289 POLA1P09884 1462 aaPredicted RBP35.85■■■■□ 3.33
SFXN5-214ENST00000482289 TARBP1Q13395 1621 aaKnown RBP35.81■■■■□ 3.32
SFXN5-214ENST00000482289 CUX1P39880 1505 aa35.78■■■■□ 3.32
SFXN5-214ENST00000482289 EIF4G3O43432 1585 aaKnown RBP35.74■■■■□ 3.31
SFXN5-214ENST00000482289 FGD5Q6ZNL6 1462 aa35.72■■■■□ 3.31
SFXN5-214ENST00000482289 SOGA1O94964 1423 aa35.7■■■■□ 3.31
SFXN5-214ENST00000482289 RAD54L2Q9Y4B4 1467 aa35.67■■■■□ 3.3
SFXN5-214ENST00000482289 AQRO60306 1485 aaKnown RBP eCLIP35.6■■■■□ 3.29
SFXN5-214ENST00000482289 OSCARQ8IYS5 282 aa35.6■■■■□ 3.29
SFXN5-214ENST00000482289 WDR97A6NE52 1622 aa35.59■■■■□ 3.29
SFXN5-214ENST00000482289 TDRD9Q8NDG6 1382 aaKnown RBP35.5■■■■□ 3.27
SFXN5-214ENST00000482289 WRNQ14191 1432 aaPredicted RBP eCLIP35.47■■■■□ 3.271e-6■■■■■ 58.5
SFXN5-214ENST00000482289 BIVM-ERCC5R4GMW8 1640 aa35.45■■■■□ 3.27
SFXN5-214ENST00000482289 TOP2BQ02880 1626 aa35.44■■■■□ 3.26
SFXN5-214ENST00000482289 ABCA10Q8WWZ4 1543 aa35.38■■■■□ 3.25
SFXN5-214ENST00000482289 SYNJ1O43426 1573 aa35.38■■■■□ 3.25
SFXN5-214ENST00000482289 CHD1O14646 1710 aa35.35■■■■□ 3.25
SFXN5-214ENST00000482289 GRIN2BQ13224 1484 aa35.34■■■■□ 3.25
SFXN5-214ENST00000482289 SNAPC4Q5SXM2 1469 aa35.3■■■■□ 3.24
SFXN5-214ENST00000482289 GAPVD1Q14C86 1478 aa35.29■■■■□ 3.24
SFXN5-214ENST00000482289 MAGI1Q96QZ7 1491 aaPredicted RBP35.29■■■■□ 3.24
SFXN5-214ENST00000482289 ABCA5Q8WWZ7 1642 aa35.27■■■■□ 3.24
SFXN5-214ENST00000482289 PBRM1Q86U86 1689 aa35.25■■■■□ 3.23
SFXN5-214ENST00000482289 FBLN2P98095 1184 aa35.24■■■■□ 3.23
SFXN5-214ENST00000482289 SYNJ2O15056 1496 aa35.14■■■■□ 3.22
SFXN5-214ENST00000482289 CHMP7Q8WUX9 453 aaPredicted RBP35.13■■■■□ 3.21
SFXN5-214ENST00000482289 RIMBP3CA6NJZ7 1639 aa35.06■■■■□ 3.2
SFXN5-214ENST00000482289 RIMBP3BA6NNM3 1639 aa35.06■■■■□ 3.2
SFXN5-214ENST00000482289 RIMBP3Q9UFD9 1639 aa35.06■■■■□ 3.2
SFXN5-214ENST00000482289 ARHGEF11O15085 1522 aa35.02■■■■□ 3.2
SFXN5-214ENST00000482289 TRIM41Q8WV44 630 aa35.01■■■■□ 3.2
SFXN5-214ENST00000482289 ERICH3Q5RHP9 1530 aa34.97■■■■□ 3.19
SFXN5-214ENST00000482289 CLASP1Q7Z460 1538 aa34.96■■■■□ 3.19
SFXN5-214ENST00000482289 ADAMTS12P58397 1594 aa34.95■■■■□ 3.18
SFXN5-214ENST00000482289 FHAD1B1AJZ9 1412 aa34.89■■■■□ 3.18
SFXN5-214ENST00000482289 GRIN2AQ12879 1464 aa34.87■■■■□ 3.17
SFXN5-214ENST00000482289 KIF27Q86VH2 1401 aa34.77■■■■□ 3.16
SFXN5-214ENST00000482289 NUP160Q12769 1436 aa34.73■■■■□ 3.15
SFXN5-214ENST00000482289 ARAP1Q96P48 1450 aa34.71■■■■□ 3.15
SFXN5-214ENST00000482289 CEP170Q5SW79 1584 aa34.7■■■■□ 3.14
SFXN5-214ENST00000482289 CYB5RLQ6IPT4 315 aa34.68■■■■□ 3.14
SFXN5-214ENST00000482289 CUL7Q14999 1698 aa34.62■■■■□ 3.13
SFXN5-214ENST00000482289 IGF1RP08069 1367 aa34.62■■■■□ 3.13
SFXN5-214ENST00000482289 SHROOM2Q13796 1616 aa34.52■■■■□ 3.12
SFXN5-214ENST00000482289 RUSC2Q8N2Y8 1516 aa34.45■■■■□ 3.1
SFXN5-214ENST00000482289 CARMIL1Q5VZK9 1371 aa34.42■■■■□ 3.1
SFXN5-214ENST00000482289 ERCC6L2Q5T890 1561 aa34.4■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms