RNA–Protein interactions for RNA: ENST00000482085.1

ACTA2-205, Transcript of actin, alpha 2, smooth muscle, aorta, humanhuman

TSL 2

Gene ACTA2, Length 755 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA2-205ENST00000482085 NISCHQ9Y2I1 1504 aa30.17■■■□□ 2.42
ACTA2-205ENST00000482085 CCDC180Q9P1Z9 1646 aa27.02■■□□□ 1.92
ACTA2-205ENST00000482085 ABCC9O60706 1549 aa26.39■■□□□ 1.82
ACTA2-205ENST00000482085 RB1CC1Q8TDY2 1594 aa25.43■■□□□ 1.66
ACTA2-205ENST00000482085 NACADO15069 1562 aa25.35■■□□□ 1.65
ACTA2-205ENST00000482085 MYO15BQ96JP2 1530 aa25.16■■□□□ 1.62
ACTA2-205ENST00000482085 ZCCHC6Q5VYS8 1495 aaKnown RBP25.15■■□□□ 1.62
ACTA2-205ENST00000482085 DCAF8L2P0C7V8 631 aa25.07■■□□□ 1.6
ACTA2-205ENST00000482085 DCAF1Q9Y4B6 1507 aa25■■□□□ 1.59
ACTA2-205ENST00000482085 UNC13AQ9UPW8 1703 aa24.92■■□□□ 1.58
ACTA2-205ENST00000482085 BICRAQ9NZM4 1560 aa24.63■■□□□ 1.53
ACTA2-205ENST00000482085 SCRIBQ14160 1630 aa24.57■■□□□ 1.52
ACTA2-205ENST00000482085 PABPN1Q86U42 306 aaKnown RBP eCLIP24.53■■□□□ 1.52
ACTA2-205ENST00000482085 SHROOM4Q9ULL8 1493 aa24.44■■□□□ 1.5
ACTA2-205ENST00000482085 DNAJC5BQ9UF47 199 aa24.19■■□□□ 1.46
ACTA2-205ENST00000482085 EIF4G1Q04637 1599 aaKnown RBP24.01■■□□□ 1.43
ACTA2-205ENST00000482085 CC2D2AQ9P2K1 1620 aa23.93■■□□□ 1.42
ACTA2-205ENST00000482085 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
ACTA2-205ENST00000482085 SMARCA4P51532 1647 aa23.5■■□□□ 1.35
ACTA2-205ENST00000482085 BAZ1AQ9NRL2 1556 aaPredicted RBP23.44■■□□□ 1.34
ACTA2-205ENST00000482085 SMARCA2P51531 1590 aa23.35■■□□□ 1.33
ACTA2-205ENST00000482085 NCAPD3P42695 1498 aa23.32■■□□□ 1.32
ACTA2-205ENST00000482085 ATAD2BQ9ULI0 1458 aa23.32■■□□□ 1.32
ACTA2-205ENST00000482085 HMGXB3Q12766 1538 aa23.29■■□□□ 1.32
ACTA2-205ENST00000482085 PEG3Q9GZU2 1588 aa23.27■■□□□ 1.32
ACTA2-205ENST00000482085 MROH2BQ7Z745 1585 aa23.23■■□□□ 1.31
ACTA2-205ENST00000482085 BAZ1BQ9UIG0 1483 aaKnown RBP23.17■■□□□ 1.3
ACTA2-205ENST00000482085 WIZO95785 1651 aa23.02■■□□□ 1.28
ACTA2-205ENST00000482085 RSF1Q96T23 1441 aaPredicted RBP22.88■■□□□ 1.25
ACTA2-205ENST00000482085 LAMC3Q9Y6N6 1575 aa22.81■■□□□ 1.24
ACTA2-205ENST00000482085 NESP48681 1621 aa22.8■■□□□ 1.24
ACTA2-205ENST00000482085 ERCC6Q03468 1493 aa22.79■■□□□ 1.24
ACTA2-205ENST00000482085 TOP2AP11388 1531 aaKnown RBP22.79■■□□□ 1.24
ACTA2-205ENST00000482085 KIF21AQ7Z4S6 1674 aa22.65■■□□□ 1.22
ACTA2-205ENST00000482085 CUX2O14529 1486 aa22.63■■□□□ 1.21
ACTA2-205ENST00000482085 THOC2Q8NI27 1593 aaKnown RBP22.6■■□□□ 1.21
ACTA2-205ENST00000482085 CADPSQ9ULU8 1353 aa22.6■■□□□ 1.21
ACTA2-205ENST00000482085 PDS5BQ9NTI5 1447 aa22.58■■□□□ 1.21
ACTA2-205ENST00000482085 PRDM2Q13029 1718 aa22.51■■□□□ 1.19
ACTA2-205ENST00000482085 CFTRP13569 1480 aa22.48■■□□□ 1.19
ACTA2-205ENST00000482085 CCDC88BA6NC98 1476 aa22.42■■□□□ 1.18
ACTA2-205ENST00000482085 CEP164Q9UPV0 1460 aa22.42■■□□□ 1.18
ACTA2-205ENST00000482085 MRC2Q9UBG0 1479 aa22.41■■□□□ 1.18
ACTA2-205ENST00000482085 FANCD2Q9BXW9 1451 aa22.4■■□□□ 1.18
ACTA2-205ENST00000482085 WDR62O43379 1518 aa22.37■■□□□ 1.17
ACTA2-205ENST00000482085 URB2Q14146 1524 aaKnown RBP22.18■■□□□ 1.14
ACTA2-205ENST00000482085 SUPT5HO00267 1087 aaKnown RBP22.09■■□□□ 1.13
ACTA2-205ENST00000482085 DNMBPQ6XZF7 1577 aa22.05■■□□□ 1.12
ACTA2-205ENST00000482085 TOPBP1Q92547 1522 aa22.03■■□□□ 1.12
ACTA2-205ENST00000482085 ABCC8Q09428 1581 aa22.03■■□□□ 1.12
ACTA2-205ENST00000482085 IFT140Q96RY7 1462 aa21.93■■□□□ 1.1
ACTA2-205ENST00000482085 DNAJC5Q9H3Z4 198 aa21.93■■□□□ 1.1
ACTA2-205ENST00000482085 TARBP1Q13395 1621 aaKnown RBP21.84■■□□□ 1.09
ACTA2-205ENST00000482085 POLA1P09884 1462 aaPredicted RBP21.83■■□□□ 1.09
ACTA2-205ENST00000482085 EIF4G3O43432 1585 aaKnown RBP21.83■■□□□ 1.09
ACTA2-205ENST00000482085 CUX1P39880 1505 aa21.82■■□□□ 1.08
ACTA2-205ENST00000482085 ZNF608Q9ULD9 1512 aaPredicted RBP21.8■■□□□ 1.08
ACTA2-205ENST00000482085 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.08
ACTA2-205ENST00000482085 WDR97A6NE52 1622 aa21.73■■□□□ 1.07
ACTA2-205ENST00000482085 RAD54L2Q9Y4B4 1467 aa21.69■■□□□ 1.06
ACTA2-205ENST00000482085 BIVM-ERCC5R4GMW8 1640 aa21.68■■□□□ 1.06
ACTA2-205ENST00000482085 SOGA1O94964 1423 aa21.67■■□□□ 1.06
ACTA2-205ENST00000482085 TOP2BQ02880 1626 aa21.65■■□□□ 1.06
ACTA2-205ENST00000482085 AQRO60306 1485 aaKnown RBP eCLIP21.63■■□□□ 1.05
ACTA2-205ENST00000482085 SYNJ1O43426 1573 aa21.62■■□□□ 1.05
ACTA2-205ENST00000482085 WRNQ14191 1432 aaPredicted RBP eCLIP21.61■■□□□ 1.05
ACTA2-205ENST00000482085 CHD1O14646 1710 aa21.6■■□□□ 1.05
ACTA2-205ENST00000482085 PBRM1Q86U86 1689 aa21.58■■□□□ 1.05
ACTA2-205ENST00000482085 ABCA10Q8WWZ4 1543 aa21.55■■□□□ 1.04
ACTA2-205ENST00000482085 ABCA5Q8WWZ7 1642 aa21.55■■□□□ 1.04
ACTA2-205ENST00000482085 TDRD9Q8NDG6 1382 aaKnown RBP21.55■■□□□ 1.04
ACTA2-205ENST00000482085 OSCARQ8IYS5 282 aa21.52■■□□□ 1.04
ACTA2-205ENST00000482085 SNAPC4Q5SXM2 1469 aa21.51■■□□□ 1.03
ACTA2-205ENST00000482085 GRIN2BQ13224 1484 aa21.5■■□□□ 1.03
ACTA2-205ENST00000482085 MAGI1Q96QZ7 1491 aaPredicted RBP21.49■■□□□ 1.03
ACTA2-205ENST00000482085 GAPVD1Q14C86 1478 aa21.47■■□□□ 1.03
ACTA2-205ENST00000482085 SYNJ2O15056 1496 aa21.39■■□□□ 1.02
ACTA2-205ENST00000482085 ADAMTS12P58397 1594 aa21.36■■□□□ 1.01
ACTA2-205ENST00000482085 RIMBP3CA6NJZ7 1639 aa21.35■■□□□ 1.01
ACTA2-205ENST00000482085 RIMBP3BA6NNM3 1639 aa21.35■■□□□ 1.01
ACTA2-205ENST00000482085 RIMBP3Q9UFD9 1639 aa21.35■■□□□ 1.01
ACTA2-205ENST00000482085 FBLN2P98095 1184 aa21.34■■□□□ 1.01
ACTA2-205ENST00000482085 ERICH3Q5RHP9 1530 aa21.32■■□□□ 1
ACTA2-205ENST00000482085 ARHGEF11O15085 1522 aa21.31■■□□□ 1
ACTA2-205ENST00000482085 CLASP1Q7Z460 1538 aa21.31■■□□□ 1
ACTA2-205ENST00000482085 CHMP7Q8WUX9 453 aaPredicted RBP21.28■■□□□ 1
ACTA2-205ENST00000482085 GRIN2AQ12879 1464 aa21.25■□□□□ 0.99
ACTA2-205ENST00000482085 FHAD1B1AJZ9 1412 aa21.21■□□□□ 0.99
ACTA2-205ENST00000482085 CEP170Q5SW79 1584 aa21.17■□□□□ 0.98
ACTA2-205ENST00000482085 CUL7Q14999 1698 aa21.17■□□□□ 0.98
ACTA2-205ENST00000482085 KIF27Q86VH2 1401 aa21.16■□□□□ 0.98
ACTA2-205ENST00000482085 TRIM41Q8WV44 630 aa21.16■□□□□ 0.98
ACTA2-205ENST00000482085 NUP160Q12769 1436 aa21.14■□□□□ 0.98
ACTA2-205ENST00000482085 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
ACTA2-205ENST00000482085 SHROOM2Q13796 1616 aa21.07■□□□□ 0.96
ACTA2-205ENST00000482085 RUSC2Q8N2Y8 1516 aa21.06■□□□□ 0.96
ACTA2-205ENST00000482085 IGF1RP08069 1367 aa21.01■□□□□ 0.95
ACTA2-205ENST00000482085 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
ACTA2-205ENST00000482085 ERCC6L2Q5T890 1561 aa20.96■□□□□ 0.95
ACTA2-205ENST00000482085 CARMIL1Q5VZK9 1371 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms