RNA–Protein interactions for RNA: ENST00000482063.1

LRRC8C-204, Transcript of leucine rich repeat containing 8 VRAC subunit C, humanhuman

TSL 3

Gene LRRC8C, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC8C-204ENST00000482063 NISCHQ9Y2I1 1504 aa37.79■■■■□ 3.64
LRRC8C-204ENST00000482063 CCDC180Q9P1Z9 1646 aa33.64■■■□□ 2.98
LRRC8C-204ENST00000482063 ABCC9O60706 1549 aa33.07■■■□□ 2.89
LRRC8C-204ENST00000482063 RB1CC1Q8TDY2 1594 aa31.81■■■□□ 2.68
LRRC8C-204ENST00000482063 NACADO15069 1562 aa31.77■■■□□ 2.68
LRRC8C-204ENST00000482063 DCAF8L2P0C7V8 631 aa31.72■■■□□ 2.67
LRRC8C-204ENST00000482063 MYO15BQ96JP2 1530 aa31.59■■■□□ 2.65
LRRC8C-204ENST00000482063 ZCCHC6Q5VYS8 1495 aaKnown RBP31.4■■■□□ 2.62
LRRC8C-204ENST00000482063 DCAF1Q9Y4B6 1507 aa31.34■■■□□ 2.61
LRRC8C-204ENST00000482063 PABPN1Q86U42 306 aaKnown RBP eCLIP30.92■■■□□ 2.54
LRRC8C-204ENST00000482063 DNAJC5BQ9UF47 199 aa30.91■■■□□ 2.54
LRRC8C-204ENST00000482063 UNC13AQ9UPW8 1703 aa30.84■■■□□ 2.53
LRRC8C-204ENST00000482063 BICRAQ9NZM4 1560 aa30.74■■■□□ 2.51
LRRC8C-204ENST00000482063 SHROOM4Q9ULL8 1493 aa30.63■■■□□ 2.49
LRRC8C-204ENST00000482063 SCRIBQ14160 1630 aa30.58■■■□□ 2.49
LRRC8C-204ENST00000482063 EIF4G1Q04637 1599 aaKnown RBP29.99■■■□□ 2.39
LRRC8C-204ENST00000482063 CC2D2AQ9P2K1 1620 aa29.89■■■□□ 2.38
LRRC8C-204ENST00000482063 CECR2Q9BXF3 1484 aa29.8■■■□□ 2.36
LRRC8C-204ENST00000482063 NCAPD3P42695 1498 aa29.35■■■□□ 2.29
LRRC8C-204ENST00000482063 BAZ1AQ9NRL2 1556 aaPredicted RBP29.32■■■□□ 2.28
LRRC8C-204ENST00000482063 SMARCA4P51532 1647 aa29.3■■■□□ 2.28
LRRC8C-204ENST00000482063 SMARCA2P51531 1590 aa29.26■■■□□ 2.28
LRRC8C-204ENST00000482063 ATAD2BQ9ULI0 1458 aa29.26■■■□□ 2.27
LRRC8C-204ENST00000482063 HMGXB3Q12766 1538 aa29.11■■■□□ 2.25
LRRC8C-204ENST00000482063 PEG3Q9GZU2 1588 aa29.09■■■□□ 2.25
LRRC8C-204ENST00000482063 MROH2BQ7Z745 1585 aa29.05■■■□□ 2.24
LRRC8C-204ENST00000482063 BAZ1BQ9UIG0 1483 aaKnown RBP29.01■■■□□ 2.23
LRRC8C-204ENST00000482063 RSF1Q96T23 1441 aaPredicted RBP28.72■■■□□ 2.19
LRRC8C-204ENST00000482063 WIZO95785 1651 aa28.66■■■□□ 2.18
LRRC8C-204ENST00000482063 ERCC6Q03468 1493 aa28.6■■■□□ 2.17
LRRC8C-204ENST00000482063 LAMC3Q9Y6N6 1575 aa28.54■■■□□ 2.16
LRRC8C-204ENST00000482063 NESP48681 1621 aa28.51■■■□□ 2.15
LRRC8C-204ENST00000482063 CADPSQ9ULU8 1353 aa28.49■■■□□ 2.15
LRRC8C-204ENST00000482063 PDS5BQ9NTI5 1447 aa28.46■■■□□ 2.15
LRRC8C-204ENST00000482063 TOP2AP11388 1531 aaKnown RBP28.45■■■□□ 2.15
LRRC8C-204ENST00000482063 CUX2O14529 1486 aa28.41■■■□□ 2.14
LRRC8C-204ENST00000482063 DNAJC5Q9H3Z4 198 aa28.25■■■□□ 2.11
LRRC8C-204ENST00000482063 CFTRP13569 1480 aa28.24■■■□□ 2.11
LRRC8C-204ENST00000482063 CCDC88BA6NC98 1476 aa28.14■■■□□ 2.09
LRRC8C-204ENST00000482063 THOC2Q8NI27 1593 aaKnown RBP28.11■■■□□ 2.09
LRRC8C-204ENST00000482063 KIF21AQ7Z4S6 1674 aa28.11■■■□□ 2.09
LRRC8C-204ENST00000482063 FANCD2Q9BXW9 1451 aa28.08■■■□□ 2.09
LRRC8C-204ENST00000482063 CEP164Q9UPV0 1460 aa28.08■■■□□ 2.09
LRRC8C-204ENST00000482063 MRC2Q9UBG0 1479 aa28.07■■■□□ 2.08
LRRC8C-204ENST00000482063 WDR62O43379 1518 aa27.95■■■□□ 2.06
LRRC8C-204ENST00000482063 SUPT5HO00267 1087 aaKnown RBP27.87■■■□□ 2.05
LRRC8C-204ENST00000482063 PRDM2Q13029 1718 aa27.83■■■□□ 2.05
LRRC8C-204ENST00000482063 URB2Q14146 1524 aaKnown RBP27.75■■■□□ 2.03
LRRC8C-204ENST00000482063 ABCC8Q09428 1581 aa27.74■■■□□ 2.03
LRRC8C-204ENST00000482063 TOPBP1Q92547 1522 aa27.59■■■□□ 2.01
LRRC8C-204ENST00000482063 DNMBPQ6XZF7 1577 aa27.54■■■□□ 2
LRRC8C-204ENST00000482063 IFT140Q96RY7 1462 aa27.54■■■□□ 2
LRRC8C-204ENST00000482063 POLA1P09884 1462 aaPredicted RBP27.34■■□□□ 1.97
LRRC8C-204ENST00000482063 SOGA1O94964 1423 aa27.32■■□□□ 1.96
LRRC8C-204ENST00000482063 OSCARQ8IYS5 282 aa27.3■■□□□ 1.96
LRRC8C-204ENST00000482063 ZNF608Q9ULD9 1512 aaPredicted RBP27.3■■□□□ 1.96
LRRC8C-204ENST00000482063 CUX1P39880 1505 aa27.26■■□□□ 1.95
LRRC8C-204ENST00000482063 TARBP1Q13395 1621 aaKnown RBP27.25■■□□□ 1.95
LRRC8C-204ENST00000482063 FGD5Q6ZNL6 1462 aa27.23■■□□□ 1.95
LRRC8C-204ENST00000482063 AQRO60306 1485 aaKnown RBP eCLIP27.19■■□□□ 1.94
LRRC8C-204ENST00000482063 RAD54L2Q9Y4B4 1467 aa27.19■■□□□ 1.94
LRRC8C-204ENST00000482063 WDR97A6NE52 1622 aa27.16■■□□□ 1.94
LRRC8C-204ENST00000482063 EIF4G3O43432 1585 aaKnown RBP27.15■■□□□ 1.94
LRRC8C-204ENST00000482063 TDRD9Q8NDG6 1382 aaKnown RBP27.12■■□□□ 1.93
LRRC8C-204ENST00000482063 WRNQ14191 1432 aaPredicted RBP eCLIP27.12■■□□□ 1.93
LRRC8C-204ENST00000482063 TRIM41Q8WV44 630 aa27.06■■□□□ 1.92
LRRC8C-204ENST00000482063 ABCA10Q8WWZ4 1543 aa27.02■■□□□ 1.92
LRRC8C-204ENST00000482063 TOP2BQ02880 1626 aa27.01■■□□□ 1.92
LRRC8C-204ENST00000482063 GRIN2BQ13224 1484 aa27■■□□□ 1.91
LRRC8C-204ENST00000482063 FBLN2P98095 1184 aa26.98■■□□□ 1.91
LRRC8C-204ENST00000482063 BIVM-ERCC5R4GMW8 1640 aa26.97■■□□□ 1.91
LRRC8C-204ENST00000482063 GAPVD1Q14C86 1478 aa26.96■■□□□ 1.91
LRRC8C-204ENST00000482063 MAGI1Q96QZ7 1491 aaPredicted RBP26.95■■□□□ 1.91
LRRC8C-204ENST00000482063 CHMP7Q8WUX9 453 aaPredicted RBP26.94■■□□□ 1.9
LRRC8C-204ENST00000482063 SYNJ1O43426 1573 aa26.91■■□□□ 1.9
LRRC8C-204ENST00000482063 SNAPC4Q5SXM2 1469 aa26.89■■□□□ 1.9
LRRC8C-204ENST00000482063 SYNJ2O15056 1496 aa26.84■■□□□ 1.89
LRRC8C-204ENST00000482063 ABCA5Q8WWZ7 1642 aa26.83■■□□□ 1.88
LRRC8C-204ENST00000482063 CHD1O14646 1710 aa26.79■■□□□ 1.88
LRRC8C-204ENST00000482063 RIMBP3CA6NJZ7 1639 aa26.76■■□□□ 1.87
LRRC8C-204ENST00000482063 RIMBP3BA6NNM3 1639 aa26.76■■□□□ 1.87
LRRC8C-204ENST00000482063 RIMBP3Q9UFD9 1639 aa26.76■■□□□ 1.87
LRRC8C-204ENST00000482063 PBRM1Q86U86 1689 aa26.73■■□□□ 1.87
LRRC8C-204ENST00000482063 ARHGEF11O15085 1522 aa26.71■■□□□ 1.87
LRRC8C-204ENST00000482063 ERICH3Q5RHP9 1530 aa26.7■■□□□ 1.87
LRRC8C-204ENST00000482063 FHAD1B1AJZ9 1412 aa26.68■■□□□ 1.86
LRRC8C-204ENST00000482063 KIF27Q86VH2 1401 aa26.62■■□□□ 1.85
LRRC8C-204ENST00000482063 GRIN2AQ12879 1464 aa26.61■■□□□ 1.85
LRRC8C-204ENST00000482063 CLASP1Q7Z460 1538 aa26.6■■□□□ 1.85
LRRC8C-204ENST00000482063 ADAMTS12P58397 1594 aa26.58■■□□□ 1.85
LRRC8C-204ENST00000482063 CYB5RLQ6IPT4 315 aa26.54■■□□□ 1.84
LRRC8C-204ENST00000482063 IGF1RP08069 1367 aa26.52■■□□□ 1.84
LRRC8C-204ENST00000482063 NUP160Q12769 1436 aa26.52■■□□□ 1.84
LRRC8C-204ENST00000482063 ARAP1Q96P48 1450 aa26.47■■□□□ 1.83
LRRC8C-204ENST00000482063 CEP170Q5SW79 1584 aa26.39■■□□□ 1.82
LRRC8C-204ENST00000482063 CARMIL1Q5VZK9 1371 aa26.37■■□□□ 1.81
LRRC8C-204ENST00000482063 CUL7Q14999 1698 aa26.37■■□□□ 1.81
LRRC8C-204ENST00000482063 JPH4Q96JJ6 628 aa26.35■■□□□ 1.81
LRRC8C-204ENST00000482063 KIAA0586Q9BVV6 1533 aa26.27■■□□□ 1.8
LRRC8C-204ENST00000482063 SHROOM2Q13796 1616 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms