RNA–Protein interactions for RNA: ENST00000482017.1

MCF2L2-211, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-211ENST00000482017 NISCHQ9Y2I1 1504 aa44.73■■■■■ 4.75
MCF2L2-211ENST00000482017 CCDC180Q9P1Z9 1646 aa39.61■■■■□ 3.93
MCF2L2-211ENST00000482017 ABCC9O60706 1549 aa38.43■■■■□ 3.74
MCF2L2-211ENST00000482017 DCAF8L2P0C7V8 631 aa37.36■■■■□ 3.57
MCF2L2-211ENST00000482017 ZCCHC6Q5VYS8 1495 aaKnown RBP37.36■■■■□ 3.57
MCF2L2-211ENST00000482017 NACADO15069 1562 aa37.08■■■■□ 3.53
MCF2L2-211ENST00000482017 RB1CC1Q8TDY2 1594 aa37.07■■■■□ 3.52
MCF2L2-211ENST00000482017 DCAF1Q9Y4B6 1507 aa36.93■■■■□ 3.5
MCF2L2-211ENST00000482017 MYO15BQ96JP2 1530 aa36.88■■■■□ 3.49
MCF2L2-211ENST00000482017 UNC13AQ9UPW8 1703 aa36.38■■■■□ 3.41
MCF2L2-211ENST00000482017 SCRIBQ14160 1630 aa36.32■■■■□ 3.4
MCF2L2-211ENST00000482017 PABPN1Q86U42 306 aaKnown RBP eCLIP35.99■■■■□ 3.35
MCF2L2-211ENST00000482017 BICRAQ9NZM4 1560 aa35.94■■■■□ 3.34
MCF2L2-211ENST00000482017 SHROOM4Q9ULL8 1493 aa35.81■■■■□ 3.32
MCF2L2-211ENST00000482017 EIF4G1Q04637 1599 aaKnown RBP34.96■■■■□ 3.19
MCF2L2-211ENST00000482017 CECR2Q9BXF3 1484 aa34.86■■■■□ 3.17
MCF2L2-211ENST00000482017 DNAJC5BQ9UF47 199 aa34.81■■■■□ 3.16
MCF2L2-211ENST00000482017 CC2D2AQ9P2K1 1620 aa34.75■■■■□ 3.15
MCF2L2-211ENST00000482017 SMARCA4P51532 1647 aa34.68■■■■□ 3.14
MCF2L2-211ENST00000482017 BAZ1AQ9NRL2 1556 aaPredicted RBP34.65■■■■□ 3.14
MCF2L2-211ENST00000482017 MROH2BQ7Z745 1585 aa34.54■■■■□ 3.12
MCF2L2-211ENST00000482017 ATAD2BQ9ULI0 1458 aa34.32■■■■□ 3.08
MCF2L2-211ENST00000482017 SMARCA2P51531 1590 aa34.3■■■■□ 3.08
MCF2L2-211ENST00000482017 WIZO95785 1651 aa34.26■■■■□ 3.08
MCF2L2-211ENST00000482017 RSF1Q96T23 1441 aaPredicted RBP34.25■■■■□ 3.07
MCF2L2-211ENST00000482017 PEG3Q9GZU2 1588 aa34.22■■■■□ 3.07
MCF2L2-211ENST00000482017 NCAPD3P42695 1498 aa34.16■■■■□ 3.06
MCF2L2-211ENST00000482017 BAZ1BQ9UIG0 1483 aaKnown RBP34.12■■■■□ 3.05
MCF2L2-211ENST00000482017 HMGXB3Q12766 1538 aa34.09■■■■□ 3.05
MCF2L2-211ENST00000482017 SUPT5HO00267 1087 aaKnown RBP33.87■■■■□ 3.01
MCF2L2-211ENST00000482017 TOP2AP11388 1531 aaKnown RBP33.84■■■■□ 3.01
MCF2L2-211ENST00000482017 CCDC88BA6NC98 1476 aa33.44■■■□□ 2.94
MCF2L2-211ENST00000482017 NESP48681 1621 aa33.39■■■□□ 2.93
MCF2L2-211ENST00000482017 LAMC3Q9Y6N6 1575 aa33.26■■■□□ 2.92
MCF2L2-211ENST00000482017 CADPSQ9ULU8 1353 aa33.23■■■□□ 2.91
MCF2L2-211ENST00000482017 CFTRP13569 1480 aa33.12■■■□□ 2.89
MCF2L2-211ENST00000482017 ERCC6Q03468 1493 aa33.09■■■□□ 2.89
MCF2L2-211ENST00000482017 PRDM2Q13029 1718 aa33.08■■■□□ 2.89
MCF2L2-211ENST00000482017 KIF21AQ7Z4S6 1674 aa33.06■■■□□ 2.88
MCF2L2-211ENST00000482017 PDS5BQ9NTI5 1447 aa33■■■□□ 2.87
MCF2L2-211ENST00000482017 FANCD2Q9BXW9 1451 aa32.92■■■□□ 2.86
MCF2L2-211ENST00000482017 CEP164Q9UPV0 1460 aa32.85■■■□□ 2.85
MCF2L2-211ENST00000482017 THOC2Q8NI27 1593 aaKnown RBP32.75■■■□□ 2.83
MCF2L2-211ENST00000482017 MRC2Q9UBG0 1479 aa32.7■■■□□ 2.83
MCF2L2-211ENST00000482017 URB2Q14146 1524 aaKnown RBP32.58■■■□□ 2.81
MCF2L2-211ENST00000482017 WDR62O43379 1518 aa32.55■■■□□ 2.8
MCF2L2-211ENST00000482017 CUX2O14529 1486 aa32.46■■■□□ 2.79
MCF2L2-211ENST00000482017 ABCC8Q09428 1581 aa32.45■■■□□ 2.79
MCF2L2-211ENST00000482017 DNMBPQ6XZF7 1577 aa32.45■■■□□ 2.79
MCF2L2-211ENST00000482017 TOPBP1Q92547 1522 aa32.45■■■□□ 2.78
MCF2L2-211ENST00000482017 CUX1P39880 1505 aa32.38■■■□□ 2.77
MCF2L2-211ENST00000482017 WRNQ14191 1432 aaPredicted RBP eCLIP32.31■■■□□ 2.76
MCF2L2-211ENST00000482017 SYNJ1O43426 1573 aa32.28■■■□□ 2.76
MCF2L2-211ENST00000482017 FGD5Q6ZNL6 1462 aa32.22■■■□□ 2.75
MCF2L2-211ENST00000482017 BIVM-ERCC5R4GMW8 1640 aa32.21■■■□□ 2.75
MCF2L2-211ENST00000482017 TOP2BQ02880 1626 aa32.19■■■□□ 2.74
MCF2L2-211ENST00000482017 POLA1P09884 1462 aaPredicted RBP32.19■■■□□ 2.74
MCF2L2-211ENST00000482017 RAD54L2Q9Y4B4 1467 aa32.1■■■□□ 2.73
MCF2L2-211ENST00000482017 IFT140Q96RY7 1462 aa32.1■■■□□ 2.73
MCF2L2-211ENST00000482017 SOGA1O94964 1423 aa32.06■■■□□ 2.72
MCF2L2-211ENST00000482017 TARBP1Q13395 1621 aaKnown RBP32.05■■■□□ 2.72
MCF2L2-211ENST00000482017 ZNF608Q9ULD9 1512 aaPredicted RBP31.99■■■□□ 2.71
MCF2L2-211ENST00000482017 WDR97A6NE52 1622 aa31.95■■■□□ 2.71
MCF2L2-211ENST00000482017 EIF4G3O43432 1585 aaKnown RBP31.9■■■□□ 2.7
MCF2L2-211ENST00000482017 TRIM41Q8WV44 630 aa31.87■■■□□ 2.69
MCF2L2-211ENST00000482017 TDRD9Q8NDG6 1382 aaKnown RBP31.86■■■□□ 2.69
MCF2L2-211ENST00000482017 ABCA10Q8WWZ4 1543 aa31.85■■■□□ 2.69
MCF2L2-211ENST00000482017 AQRO60306 1485 aaKnown RBP eCLIP31.85■■■□□ 2.69
MCF2L2-211ENST00000482017 CHIC1Q5VXU3 224 aa31.76■■■□□ 2.67
MCF2L2-211ENST00000482017 ABCA5Q8WWZ7 1642 aa31.74■■■□□ 2.67
MCF2L2-211ENST00000482017 PBRM1Q86U86 1689 aa31.73■■■□□ 2.67
MCF2L2-211ENST00000482017 GAPVD1Q14C86 1478 aa31.71■■■□□ 2.67
MCF2L2-211ENST00000482017 GRIN2BQ13224 1484 aa31.62■■■□□ 2.65
MCF2L2-211ENST00000482017 SNAPC4Q5SXM2 1469 aa31.59■■■□□ 2.65
MCF2L2-211ENST00000482017 KIF27Q86VH2 1401 aa31.58■■■□□ 2.65
MCF2L2-211ENST00000482017 RUSC2Q8N2Y8 1516 aa31.51■■■□□ 2.63
MCF2L2-211ENST00000482017 CHD1O14646 1710 aa31.49■■■□□ 2.63
MCF2L2-211ENST00000482017 ERICH3Q5RHP9 1530 aa31.48■■■□□ 2.63
MCF2L2-211ENST00000482017 MAGI1Q96QZ7 1491 aaPredicted RBP31.47■■■□□ 2.63
MCF2L2-211ENST00000482017 FBLN2P98095 1184 aa31.45■■■□□ 2.63
MCF2L2-211ENST00000482017 ADAMTS12P58397 1594 aa31.43■■■□□ 2.62
MCF2L2-211ENST00000482017 SYNJ2O15056 1496 aa31.36■■■□□ 2.61
MCF2L2-211ENST00000482017 IGF1RP08069 1367 aa31.36■■■□□ 2.61
MCF2L2-211ENST00000482017 CHMP7Q8WUX9 453 aaPredicted RBP31.35■■■□□ 2.61
MCF2L2-211ENST00000482017 FAM9AQ8IZU1 332 aaPredicted RBP31.34■■■□□ 2.61
MCF2L2-211ENST00000482017 CUL7Q14999 1698 aa31.34■■■□□ 2.61
MCF2L2-211ENST00000482017 FHAD1B1AJZ9 1412 aa31.32■■■□□ 2.61
MCF2L2-211ENST00000482017 GRIN2AQ12879 1464 aa31.23■■■□□ 2.59
MCF2L2-211ENST00000482017 CARMIL1Q5VZK9 1371 aa31.23■■■□□ 2.59
MCF2L2-211ENST00000482017 EEA1Q15075 1411 aa31.21■■■□□ 2.59
MCF2L2-211ENST00000482017 OSCARQ8IYS5 282 aa31.2■■■□□ 2.59
MCF2L2-211ENST00000482017 CSRNP3Q8WYN3 585 aa31.15■■■□□ 2.58
MCF2L2-211ENST00000482017 CEP170Q5SW79 1584 aa31.11■■■□□ 2.57
MCF2L2-211ENST00000482017 RAPGEF2Q9Y4G8 1499 aa31.09■■■□□ 2.57
MCF2L2-211ENST00000482017 PRXQ9BXM0 1461 aa31.05■■■□□ 2.56
MCF2L2-211ENST00000482017 NUP160Q12769 1436 aa31.03■■■□□ 2.56
MCF2L2-211ENST00000482017 CLASP1Q7Z460 1538 aa31.02■■■□□ 2.56
MCF2L2-211ENST00000482017 EHMT2Q96KQ7 1210 aa31.01■■■□□ 2.55
MCF2L2-211ENST00000482017 KIF21BO75037 1637 aa30.95■■■□□ 2.54
MCF2L2-211ENST00000482017 DNAJC5Q9H3Z4 198 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms