RNA–Protein interactions for RNA: ENST00000481818.1

TSN-206, Transcript of translin, humanhuman

TSL 3

Gene TSN, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSN-206ENST00000481818 NISCHQ9Y2I1 1504 aa29.78■■■□□ 2.36
TSN-206ENST00000481818 CCDC180Q9P1Z9 1646 aa26.63■■□□□ 1.85
TSN-206ENST00000481818 ABCC9O60706 1549 aa26.21■■□□□ 1.79
TSN-206ENST00000481818 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.62
TSN-206ENST00000481818 NACADO15069 1562 aa25.05■■□□□ 1.6
TSN-206ENST00000481818 DCAF8L2P0C7V8 631 aa24.98■■□□□ 1.59
TSN-206ENST00000481818 MYO15BQ96JP2 1530 aa24.8■■□□□ 1.56
TSN-206ENST00000481818 ZCCHC6Q5VYS8 1495 aaKnown RBP24.77■■□□□ 1.56
TSN-206ENST00000481818 UNC13AQ9UPW8 1703 aa24.63■■□□□ 1.53
TSN-206ENST00000481818 DCAF1Q9Y4B6 1507 aa24.62■■□□□ 1.53
TSN-206ENST00000481818 PABPN1Q86U42 306 aaKnown RBP eCLIP24.43■■□□□ 1.5
TSN-206ENST00000481818 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
TSN-206ENST00000481818 SCRIBQ14160 1630 aa24.27■■□□□ 1.48
TSN-206ENST00000481818 DNAJC5BQ9UF47 199 aa24.19■■□□□ 1.46
TSN-206ENST00000481818 SHROOM4Q9ULL8 1493 aa24.09■■□□□ 1.45
TSN-206ENST00000481818 EIF4G1Q04637 1599 aaKnown RBP23.75■■□□□ 1.39
TSN-206ENST00000481818 CC2D2AQ9P2K1 1620 aa23.73■■□□□ 1.39
TSN-206ENST00000481818 CECR2Q9BXF3 1484 aa23.57■■□□□ 1.36
TSN-206ENST00000481818 SMARCA4P51532 1647 aa23.18■■□□□ 1.3
TSN-206ENST00000481818 BAZ1AQ9NRL2 1556 aaPredicted RBP23.12■■□□□ 1.29
TSN-206ENST00000481818 NCAPD3P42695 1498 aa23.08■■□□□ 1.29
TSN-206ENST00000481818 ATAD2BQ9ULI0 1458 aa23.07■■□□□ 1.28
TSN-206ENST00000481818 SMARCA2P51531 1590 aa23.06■■□□□ 1.28
TSN-206ENST00000481818 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
TSN-206ENST00000481818 MROH2BQ7Z745 1585 aa22.95■■□□□ 1.26
TSN-206ENST00000481818 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
TSN-206ENST00000481818 BAZ1BQ9UIG0 1483 aaKnown RBP22.9■■□□□ 1.26
TSN-206ENST00000481818 WIZO95785 1651 aa22.73■■□□□ 1.23
TSN-206ENST00000481818 ERCC6Q03468 1493 aa22.63■■□□□ 1.21
TSN-206ENST00000481818 NESP48681 1621 aa22.61■■□□□ 1.21
TSN-206ENST00000481818 RSF1Q96T23 1441 aaPredicted RBP22.59■■□□□ 1.21
TSN-206ENST00000481818 LAMC3Q9Y6N6 1575 aa22.55■■□□□ 1.2
TSN-206ENST00000481818 TOP2AP11388 1531 aaKnown RBP22.46■■□□□ 1.19
TSN-206ENST00000481818 CUX2O14529 1486 aa22.44■■□□□ 1.18
TSN-206ENST00000481818 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
TSN-206ENST00000481818 KIF21AQ7Z4S6 1674 aa22.4■■□□□ 1.18
TSN-206ENST00000481818 PDS5BQ9NTI5 1447 aa22.39■■□□□ 1.17
TSN-206ENST00000481818 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
TSN-206ENST00000481818 CFTRP13569 1480 aa22.22■■□□□ 1.15
TSN-206ENST00000481818 CCDC88BA6NC98 1476 aa22.17■■□□□ 1.14
TSN-206ENST00000481818 MRC2Q9UBG0 1479 aa22.17■■□□□ 1.14
TSN-206ENST00000481818 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
TSN-206ENST00000481818 FANCD2Q9BXW9 1451 aa22.16■■□□□ 1.14
TSN-206ENST00000481818 PRDM2Q13029 1718 aa22.15■■□□□ 1.14
TSN-206ENST00000481818 WDR62O43379 1518 aa22.11■■□□□ 1.13
TSN-206ENST00000481818 DNAJC5Q9H3Z4 198 aa21.97■■□□□ 1.11
TSN-206ENST00000481818 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
TSN-206ENST00000481818 SUPT5HO00267 1087 aaKnown RBP21.89■■□□□ 1.09
TSN-206ENST00000481818 TOPBP1Q92547 1522 aa21.79■■□□□ 1.08
TSN-206ENST00000481818 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
TSN-206ENST00000481818 DNMBPQ6XZF7 1577 aa21.76■■□□□ 1.07
TSN-206ENST00000481818 IFT140Q96RY7 1462 aa21.7■■□□□ 1.06
TSN-206ENST00000481818 ZNF608Q9ULD9 1512 aaPredicted RBP21.61■■□□□ 1.05
TSN-206ENST00000481818 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.05
TSN-206ENST00000481818 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.04
TSN-206ENST00000481818 EIF4G3O43432 1585 aaKnown RBP21.57■■□□□ 1.04
TSN-206ENST00000481818 CUX1P39880 1505 aa21.55■■□□□ 1.04
TSN-206ENST00000481818 FGD5Q6ZNL6 1462 aa21.52■■□□□ 1.03
TSN-206ENST00000481818 SOGA1O94964 1423 aa21.49■■□□□ 1.03
TSN-206ENST00000481818 RAD54L2Q9Y4B4 1467 aa21.49■■□□□ 1.03
TSN-206ENST00000481818 AQRO60306 1485 aaKnown RBP eCLIP21.46■■□□□ 1.032e-8■■■□□ 19
TSN-206ENST00000481818 OSCARQ8IYS5 282 aa21.46■■□□□ 1.03
TSN-206ENST00000481818 WDR97A6NE52 1622 aa21.4■■□□□ 1.02
TSN-206ENST00000481818 TDRD9Q8NDG6 1382 aaKnown RBP21.39■■□□□ 1.02
TSN-206ENST00000481818 CHD1O14646 1710 aa21.37■■□□□ 1.01
TSN-206ENST00000481818 BIVM-ERCC5R4GMW8 1640 aa21.34■■□□□ 1.01
TSN-206ENST00000481818 WRNQ14191 1432 aaPredicted RBP eCLIP21.33■■□□□ 1.01
TSN-206ENST00000481818 TOP2BQ02880 1626 aa21.33■■□□□ 1
TSN-206ENST00000481818 SYNJ1O43426 1573 aa21.31■■□□□ 1
TSN-206ENST00000481818 PBRM1Q86U86 1689 aa21.28■■□□□ 1
TSN-206ENST00000481818 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
TSN-206ENST00000481818 ABCA10Q8WWZ4 1543 aa21.28■■□□□ 1
TSN-206ENST00000481818 GRIN2BQ13224 1484 aa21.27■■□□□ 1
TSN-206ENST00000481818 FBLN2P98095 1184 aa21.27■■□□□ 1
TSN-206ENST00000481818 ABCA5Q8WWZ7 1642 aa21.25■□□□□ 0.99
TSN-206ENST00000481818 GAPVD1Q14C86 1478 aa21.25■□□□□ 0.99
TSN-206ENST00000481818 MAGI1Q96QZ7 1491 aaPredicted RBP21.24■□□□□ 0.99
TSN-206ENST00000481818 TRIM41Q8WV44 630 aa21.2■□□□□ 0.98
TSN-206ENST00000481818 RIMBP3CA6NJZ7 1639 aa21.18■□□□□ 0.98
TSN-206ENST00000481818 RIMBP3BA6NNM3 1639 aa21.18■□□□□ 0.98
TSN-206ENST00000481818 RIMBP3Q9UFD9 1639 aa21.18■□□□□ 0.98
TSN-206ENST00000481818 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
TSN-206ENST00000481818 CHMP7Q8WUX9 453 aaPredicted RBP21.16■□□□□ 0.98
TSN-206ENST00000481818 ARHGEF11O15085 1522 aa21.14■□□□□ 0.97
TSN-206ENST00000481818 CLASP1Q7Z460 1538 aa21.07■□□□□ 0.96
TSN-206ENST00000481818 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
TSN-206ENST00000481818 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
TSN-206ENST00000481818 GRIN2AQ12879 1464 aa21.01■□□□□ 0.95
TSN-206ENST00000481818 FHAD1B1AJZ9 1412 aa20.98■□□□□ 0.95
TSN-206ENST00000481818 ARAP1Q96P48 1450 aa20.94■□□□□ 0.94
TSN-206ENST00000481818 CYB5RLQ6IPT4 315 aa20.94■□□□□ 0.94
TSN-206ENST00000481818 CEP170Q5SW79 1584 aa20.92■□□□□ 0.94
TSN-206ENST00000481818 KIF27Q86VH2 1401 aa20.9■□□□□ 0.94
TSN-206ENST00000481818 NUP160Q12769 1436 aa20.89■□□□□ 0.94
TSN-206ENST00000481818 CUL7Q14999 1698 aa20.84■□□□□ 0.93
TSN-206ENST00000481818 IGF1RP08069 1367 aa20.81■□□□□ 0.92
TSN-206ENST00000481818 SHROOM2Q13796 1616 aa20.8■□□□□ 0.92
TSN-206ENST00000481818 ERCC6L2Q5T890 1561 aa20.76■□□□□ 0.91
TSN-206ENST00000481818 RUSC2Q8N2Y8 1516 aa20.76■□□□□ 0.91
TSN-206ENST00000481818 CARMIL1Q5VZK9 1371 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms