RNA–Protein interactions for RNA: ENST00000481259.1

BRD2-210, Transcript of bromodomain containing 2, humanhuman

TSL 3

Gene BRD2, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2-210ENST00000481259 AEBP2Q6ZN18 517 aaPredicted RBP15.28■□□□□ 0.04
BRD2-210ENST00000481259 CHIC1Q5VXU3 224 aa14.53□□□□□ -0.08
BRD2-210ENST00000481259 SENP3Q9H4L4 574 aaPredicted RBP13.02□□□□□ -0.33
BRD2-210ENST00000481259 PHF23Q9BUL5 403 aaPredicted RBP12.87□□□□□ -0.35
BRD2-210ENST00000481259 NISCHQ9Y2I1 1504 aa12.16□□□□□ -0.46
BRD2-210ENST00000481259 FOXD1Q16676 465 aa12.14□□□□□ -0.47
BRD2-210ENST00000481259 PLPPR3Q6T4P5 718 aa11.62□□□□□ -0.55
BRD2-210ENST00000481259 PPP6R1Q9UPN7 881 aa11.38□□□□□ -0.59
BRD2-210ENST00000481259 MSH5O43196 834 aa11.35□□□□□ -0.59
BRD2-210ENST00000481259 ADRA2BP18089 450 aa11.34□□□□□ -0.59
BRD2-210ENST00000481259 PIAS4Q8N2W9 510 aaPredicted RBP11.34□□□□□ -0.59
BRD2-210ENST00000481259 POTEDQ86YR6 584 aa11.31□□□□□ -0.6
BRD2-210ENST00000481259 CCDC180Q9P1Z9 1646 aa10.74□□□□□ -0.69
BRD2-210ENST00000481259 ABCC9O60706 1549 aa10.63□□□□□ -0.71
BRD2-210ENST00000481259 MAPK8IP2Q13387 824 aaPredicted RBP10.41□□□□□ -0.74
BRD2-210ENST00000481259 SCAF1Q9H7N4 1312 aaKnown RBP10.36□□□□□ -0.75
BRD2-210ENST00000481259 DMRT2Q9Y5R5 561 aa10.33□□□□□ -0.76
BRD2-210ENST00000481259 DCAF8L2P0C7V8 631 aa10.29□□□□□ -0.76
BRD2-210ENST00000481259 PPP4R3CPQ6ZMV5 832 aa10.19□□□□□ -0.78
BRD2-210ENST00000481259 NACADO15069 1562 aa10.18□□□□□ -0.78
BRD2-210ENST00000481259 RB1CC1Q8TDY2 1594 aa10.18□□□□□ -0.78
BRD2-210ENST00000481259 DNAJC5BQ9UF47 199 aa10.16□□□□□ -0.78
BRD2-210ENST00000481259 MYO15BQ96JP2 1530 aa10.12□□□□□ -0.79
BRD2-210ENST00000481259 ZCCHC6Q5VYS8 1495 aaKnown RBP10.1□□□□□ -0.79
BRD2-210ENST00000481259 DCAF1Q9Y4B6 1507 aa10.06□□□□□ -0.8
BRD2-210ENST00000481259 CNKSR2Q8WXI2 1034 aa10□□□□□ -0.81
BRD2-210ENST00000481259 PABPN1Q86U42 306 aaKnown RBP eCLIP9.99□□□□□ -0.81
BRD2-210ENST00000481259 HOXD11P31277 338 aaPredicted RBP9.96□□□□□ -0.82
BRD2-210ENST00000481259 DCAF8L1A6NGE4 600 aa9.92□□□□□ -0.82
BRD2-210ENST00000481259 RNF216Q9NWF9 866 aaPredicted RBP9.9□□□□□ -0.82
BRD2-210ENST00000481259 DNAJC5Q9H3Z4 198 aa9.86□□□□□ -0.83
BRD2-210ENST00000481259 BICRAQ9NZM4 1560 aa9.86□□□□□ -0.83
BRD2-210ENST00000481259 UNC13AQ9UPW8 1703 aa9.85□□□□□ -0.83
BRD2-210ENST00000481259 SCRIBQ14160 1630 aa9.83□□□□□ -0.84
BRD2-210ENST00000481259 NCBP3Q53F19 620 aaKnown RBP9.81□□□□□ -0.84
BRD2-210ENST00000481259 SHROOM4Q9ULL8 1493 aa9.78□□□□□ -0.84
BRD2-210ENST00000481259 CACNB1Q02641 598 aaPredicted RBP9.73□□□□□ -0.85
BRD2-210ENST00000481259 RNF39Q9H2S5 420 aa9.68□□□□□ -0.86
BRD2-210ENST00000481259 NPM3O75607 178 aaKnown RBP9.66□□□□□ -0.86
BRD2-210ENST00000481259 EIF4G1Q04637 1599 aaKnown RBP9.62□□□□□ -0.87
BRD2-210ENST00000481259 CC2D2AQ9P2K1 1620 aa9.58□□□□□ -0.88
BRD2-210ENST00000481259 CECR2Q9BXF3 1484 aa9.56□□□□□ -0.88
BRD2-210ENST00000481259 C1QBPQ07021 282 aaKnown RBP9.55□□□□□ -0.88
BRD2-210ENST00000481259 KCNA4P22459 653 aa9.5□□□□□ -0.89
BRD2-210ENST00000481259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.5□□□□□ -0.898e-11■□□□□ 10.2
BRD2-210ENST00000481259 NCAPD3P42695 1498 aa9.43□□□□□ -0.9
BRD2-210ENST00000481259 BAZ1AQ9NRL2 1556 aaPredicted RBP9.42□□□□□ -0.9
BRD2-210ENST00000481259 ATAD2BQ9ULI0 1458 aa9.42□□□□□ -0.9
BRD2-210ENST00000481259 SMARCA4P51532 1647 aa9.4□□□□□ -0.9
BRD2-210ENST00000481259 SMARCA2P51531 1590 aa9.37□□□□□ -0.91
BRD2-210ENST00000481259 MROH2BQ7Z745 1585 aa9.37□□□□□ -0.91
BRD2-210ENST00000481259 BAZ1BQ9UIG0 1483 aaKnown RBP9.33□□□□□ -0.92
BRD2-210ENST00000481259 PEG3Q9GZU2 1588 aa9.33□□□□□ -0.92
BRD2-210ENST00000481259 HMGXB3Q12766 1538 aa9.32□□□□□ -0.92
BRD2-210ENST00000481259 U3KPZ7 1027 aaPredicted RBP9.3□□□□□ -0.92
BRD2-210ENST00000481259 RSF1Q96T23 1441 aaPredicted RBP9.29□□□□□ -0.92
BRD2-210ENST00000481259 TRIM41Q8WV44 630 aa9.27□□□□□ -0.93
BRD2-210ENST00000481259 WIZO95785 1651 aa9.23□□□□□ -0.93
BRD2-210ENST00000481259 SLC4A2P04920 1241 aa9.22□□□□□ -0.93
BRD2-210ENST00000481259 NESP48681 1621 aa9.18□□□□□ -0.94
BRD2-210ENST00000481259 CADPSQ9ULU8 1353 aa9.18□□□□□ -0.94
BRD2-210ENST00000481259 ERCC6Q03468 1493 aa9.17□□□□□ -0.94
BRD2-210ENST00000481259 SPINK5Q9NQ38 1064 aaPredicted RBP9.16□□□□□ -0.94
BRD2-210ENST00000481259 TOP2AP11388 1531 aaKnown RBP9.15□□□□□ -0.95
BRD2-210ENST00000481259 PDS5BQ9NTI5 1447 aa9.14□□□□□ -0.95
BRD2-210ENST00000481259 CAPN15O75808 1086 aa9.14□□□□□ -0.95
BRD2-210ENST00000481259 LAMC3Q9Y6N6 1575 aa9.14□□□□□ -0.95
BRD2-210ENST00000481259 CCDC88BA6NC98 1476 aa9.09□□□□□ -0.95
BRD2-210ENST00000481259 CUX2O14529 1486 aa9.08□□□□□ -0.96
BRD2-210ENST00000481259 CFTRP13569 1480 aa9.08□□□□□ -0.96
BRD2-210ENST00000481259 SUPT5HO00267 1087 aaKnown RBP9.08□□□□□ -0.96
BRD2-210ENST00000481259 DSG3P32926 999 aa9.08□□□□□ -0.96
BRD2-210ENST00000481259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.04□□□□□ -0.96
BRD2-210ENST00000481259 APLP2Q06481 763 aa9.04□□□□□ -0.96
BRD2-210ENST00000481259 HNRNPUL2Q1KMD3 747 aaKnown RBP9.04□□□□□ -0.96
BRD2-210ENST00000481259 FANCD2Q9BXW9 1451 aa9.03□□□□□ -0.96
BRD2-210ENST00000481259 CEP164Q9UPV0 1460 aa9.01□□□□□ -0.97
BRD2-210ENST00000481259 TRHP20396 242 aaPredicted RBP9□□□□□ -0.97
BRD2-210ENST00000481259 MRC2Q9UBG0 1479 aa9□□□□□ -0.97
BRD2-210ENST00000481259 SAMD1Q6SPF0 538 aaPredicted RBP8.99□□□□□ -0.97
BRD2-210ENST00000481259 ZNF219Q9P2Y4 722 aaPredicted RBP8.99□□□□□ -0.97
BRD2-210ENST00000481259 THOC2Q8NI27 1593 aaKnown RBP8.99□□□□□ -0.97
BRD2-210ENST00000481259 KIF21AQ7Z4S6 1674 aa8.98□□□□□ -0.97
BRD2-210ENST00000481259 SLC4A1APQ9BWU0 796 aaKnown RBP8.97□□□□□ -0.97
BRD2-210ENST00000481259 WDR62O43379 1518 aa8.95□□□□□ -0.98
BRD2-210ENST00000481259 MYCNP04198 464 aaPredicted RBP8.94□□□□□ -0.98
BRD2-210ENST00000481259 ABCB7O75027 752 aa8.93□□□□□ -0.98
BRD2-210ENST00000481259 URB2Q14146 1524 aaKnown RBP8.93□□□□□ -0.98
BRD2-210ENST00000481259 ABCC8Q09428 1581 aa8.9□□□□□ -0.99
BRD2-210ENST00000481259 TOPBP1Q92547 1522 aa8.87□□□□□ -0.99
BRD2-210ENST00000481259 PRDM2Q13029 1718 aa8.86□□□□□ -0.99
BRD2-210ENST00000481259 FOXD4L1Q9NU39 408 aa8.86□□□□□ -0.99
BRD2-210ENST00000481259 IFT140Q96RY7 1462 aa8.84□□□□□ -0.99
BRD2-210ENST00000481259 DNMBPQ6XZF7 1577 aa8.83□□□□□ -1
BRD2-210ENST00000481259 SOGA1O94964 1423 aa8.81□□□□□ -1
BRD2-210ENST00000481259 POLA1P09884 1462 aaPredicted RBP8.79□□□□□ -1
BRD2-210ENST00000481259 OSCARQ8IYS5 282 aa8.79□□□□□ -1
BRD2-210ENST00000481259 ZNF608Q9ULD9 1512 aaPredicted RBP8.79□□□□□ -1
BRD2-210ENST00000481259 CUX1P39880 1505 aa8.78□□□□□ -1
BRD2-210ENST00000481259 RAD54L2Q9Y4B4 1467 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms