RNA–Protein interactions for RNA: ENST00000480947.1

ACTR1A-203, Transcript of ARP1 actin related protein 1 homolog A, humanhuman

TSL 3

Gene ACTR1A, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1A-203ENST00000480947 NISCHQ9Y2I1 1504 aa36.76■■■■□ 3.48
ACTR1A-203ENST00000480947 CCDC180Q9P1Z9 1646 aa32.61■■■□□ 2.81
ACTR1A-203ENST00000480947 ABCC9O60706 1549 aa31.55■■■□□ 2.64
ACTR1A-203ENST00000480947 ZCCHC6Q5VYS8 1495 aaKnown RBP30.7■■■□□ 2.51
ACTR1A-203ENST00000480947 NACADO15069 1562 aa30.58■■■□□ 2.49
ACTR1A-203ENST00000480947 MYO15BQ96JP2 1530 aa30.55■■■□□ 2.48
ACTR1A-203ENST00000480947 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
ACTR1A-203ENST00000480947 DCAF1Q9Y4B6 1507 aa30.5■■■□□ 2.47
ACTR1A-203ENST00000480947 DCAF8L2P0C7V8 631 aa30.43■■■□□ 2.46
ACTR1A-203ENST00000480947 UNC13AQ9UPW8 1703 aa29.81■■■□□ 2.36
ACTR1A-203ENST00000480947 SCRIBQ14160 1630 aa29.68■■■□□ 2.34
ACTR1A-203ENST00000480947 BICRAQ9NZM4 1560 aa29.6■■■□□ 2.33
ACTR1A-203ENST00000480947 PABPN1Q86U42 306 aaKnown RBP eCLIP29.48■■■□□ 2.31
ACTR1A-203ENST00000480947 SHROOM4Q9ULL8 1493 aa29.42■■■□□ 2.3
ACTR1A-203ENST00000480947 EIF4G1Q04637 1599 aaKnown RBP28.79■■■□□ 2.2
ACTR1A-203ENST00000480947 DNAJC5BQ9UF47 199 aa28.7■■■□□ 2.18
ACTR1A-203ENST00000480947 CC2D2AQ9P2K1 1620 aa28.59■■■□□ 2.17
ACTR1A-203ENST00000480947 CECR2Q9BXF3 1484 aa28.57■■■□□ 2.16
ACTR1A-203ENST00000480947 BAZ1AQ9NRL2 1556 aaPredicted RBP28.49■■■□□ 2.15
ACTR1A-203ENST00000480947 SMARCA4P51532 1647 aa28.47■■■□□ 2.15
ACTR1A-203ENST00000480947 MROH2BQ7Z745 1585 aa28.31■■■□□ 2.12
ACTR1A-203ENST00000480947 ATAD2BQ9ULI0 1458 aa28.25■■■□□ 2.11
ACTR1A-203ENST00000480947 SMARCA2P51531 1590 aa28.24■■■□□ 2.11
ACTR1A-203ENST00000480947 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
ACTR1A-203ENST00000480947 NCAPD3P42695 1498 aa28.21■■■□□ 2.11
ACTR1A-203ENST00000480947 HMGXB3Q12766 1538 aa28.13■■■□□ 2.09
ACTR1A-203ENST00000480947 RSF1Q96T23 1441 aaPredicted RBP28.09■■■□□ 2.09
ACTR1A-203ENST00000480947 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
ACTR1A-203ENST00000480947 WIZO95785 1651 aa27.99■■■□□ 2.07
ACTR1A-203ENST00000480947 TOP2AP11388 1531 aaKnown RBP27.77■■■□□ 2.04
ACTR1A-203ENST00000480947 SUPT5HO00267 1087 aaKnown RBP27.44■■□□□ 1.98
ACTR1A-203ENST00000480947 LAMC3Q9Y6N6 1575 aa27.43■■□□□ 1.98
ACTR1A-203ENST00000480947 CCDC88BA6NC98 1476 aa27.4■■□□□ 1.98
ACTR1A-203ENST00000480947 NESP48681 1621 aa27.38■■□□□ 1.97
ACTR1A-203ENST00000480947 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
ACTR1A-203ENST00000480947 CFTRP13569 1480 aa27.3■■□□□ 1.96
ACTR1A-203ENST00000480947 PDS5BQ9NTI5 1447 aa27.22■■□□□ 1.95
ACTR1A-203ENST00000480947 ERCC6Q03468 1493 aa27.19■■□□□ 1.94
ACTR1A-203ENST00000480947 PRDM2Q13029 1718 aa27.1■■□□□ 1.93
ACTR1A-203ENST00000480947 KIF21AQ7Z4S6 1674 aa27.08■■□□□ 1.93
ACTR1A-203ENST00000480947 FANCD2Q9BXW9 1451 aa27.06■■□□□ 1.92
ACTR1A-203ENST00000480947 CEP164Q9UPV0 1460 aa27.01■■□□□ 1.91
ACTR1A-203ENST00000480947 THOC2Q8NI27 1593 aaKnown RBP26.97■■□□□ 1.91
ACTR1A-203ENST00000480947 MRC2Q9UBG0 1479 aa26.93■■□□□ 1.9
ACTR1A-203ENST00000480947 CUX2O14529 1486 aa26.88■■□□□ 1.89
ACTR1A-203ENST00000480947 WDR62O43379 1518 aa26.85■■□□□ 1.89
ACTR1A-203ENST00000480947 URB2Q14146 1524 aaKnown RBP26.77■■□□□ 1.88
ACTR1A-203ENST00000480947 ABCC8Q09428 1581 aa26.71■■□□□ 1.87
ACTR1A-203ENST00000480947 DNMBPQ6XZF7 1577 aa26.67■■□□□ 1.86
ACTR1A-203ENST00000480947 TOPBP1Q92547 1522 aa26.66■■□□□ 1.86
ACTR1A-203ENST00000480947 CUX1P39880 1505 aa26.55■■□□□ 1.84
ACTR1A-203ENST00000480947 WRNQ14191 1432 aaPredicted RBP eCLIP26.48■■□□□ 1.83
ACTR1A-203ENST00000480947 POLA1P09884 1462 aaPredicted RBP26.45■■□□□ 1.82
ACTR1A-203ENST00000480947 IFT140Q96RY7 1462 aa26.45■■□□□ 1.82
ACTR1A-203ENST00000480947 BIVM-ERCC5R4GMW8 1640 aa26.42■■□□□ 1.82
ACTR1A-203ENST00000480947 TOP2BQ02880 1626 aa26.41■■□□□ 1.82
ACTR1A-203ENST00000480947 FGD5Q6ZNL6 1462 aa26.41■■□□□ 1.82
ACTR1A-203ENST00000480947 SYNJ1O43426 1573 aa26.39■■□□□ 1.82
ACTR1A-203ENST00000480947 TARBP1Q13395 1621 aaKnown RBP26.36■■□□□ 1.81
ACTR1A-203ENST00000480947 SOGA1O94964 1423 aa26.32■■□□□ 1.8
ACTR1A-203ENST00000480947 RAD54L2Q9Y4B4 1467 aa26.29■■□□□ 1.8
ACTR1A-203ENST00000480947 ZNF608Q9ULD9 1512 aaPredicted RBP26.26■■□□□ 1.79
ACTR1A-203ENST00000480947 WDR97A6NE52 1622 aa26.24■■□□□ 1.79
ACTR1A-203ENST00000480947 ABCA10Q8WWZ4 1543 aa26.21■■□□□ 1.79
ACTR1A-203ENST00000480947 EIF4G3O43432 1585 aaKnown RBP26.2■■□□□ 1.78
ACTR1A-203ENST00000480947 AQRO60306 1485 aaKnown RBP eCLIP26.12■■□□□ 1.773e-6■■□□□ 13.8
ACTR1A-203ENST00000480947 TDRD9Q8NDG6 1382 aaKnown RBP26.11■■□□□ 1.77
ACTR1A-203ENST00000480947 ABCA5Q8WWZ7 1642 aa26.08■■□□□ 1.77
ACTR1A-203ENST00000480947 GAPVD1Q14C86 1478 aa26.04■■□□□ 1.76
ACTR1A-203ENST00000480947 GRIN2BQ13224 1484 aa26.02■■□□□ 1.76
ACTR1A-203ENST00000480947 PBRM1Q86U86 1689 aa25.96■■□□□ 1.75
ACTR1A-203ENST00000480947 TRIM41Q8WV44 630 aa25.95■■□□□ 1.74
ACTR1A-203ENST00000480947 MAGI1Q96QZ7 1491 aaPredicted RBP25.94■■□□□ 1.74
ACTR1A-203ENST00000480947 SNAPC4Q5SXM2 1469 aa25.93■■□□□ 1.74
ACTR1A-203ENST00000480947 KIF27Q86VH2 1401 aa25.9■■□□□ 1.74
ACTR1A-203ENST00000480947 ERICH3Q5RHP9 1530 aa25.9■■□□□ 1.74
ACTR1A-203ENST00000480947 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
ACTR1A-203ENST00000480947 SYNJ2O15056 1496 aa25.82■■□□□ 1.72
ACTR1A-203ENST00000480947 ADAMTS12P58397 1594 aa25.81■■□□□ 1.72
ACTR1A-203ENST00000480947 CHD1O14646 1710 aa25.79■■□□□ 1.72
ACTR1A-203ENST00000480947 FHAD1B1AJZ9 1412 aa25.77■■□□□ 1.72
ACTR1A-203ENST00000480947 IGF1RP08069 1367 aa25.76■■□□□ 1.71
ACTR1A-203ENST00000480947 OSCARQ8IYS5 282 aa25.74■■□□□ 1.71
ACTR1A-203ENST00000480947 CHMP7Q8WUX9 453 aaPredicted RBP25.72■■□□□ 1.71
ACTR1A-203ENST00000480947 CUL7Q14999 1698 aa25.71■■□□□ 1.71
ACTR1A-203ENST00000480947 FBLN2P98095 1184 aa25.7■■□□□ 1.7
ACTR1A-203ENST00000480947 RUSC2Q8N2Y8 1516 aa25.69■■□□□ 1.7
ACTR1A-203ENST00000480947 DNAJC5Q9H3Z4 198 aa25.69■■□□□ 1.7
ACTR1A-203ENST00000480947 GRIN2AQ12879 1464 aa25.68■■□□□ 1.7
ACTR1A-203ENST00000480947 EEA1Q15075 1411 aa25.63■■□□□ 1.69
ACTR1A-203ENST00000480947 CARMIL1Q5VZK9 1371 aa25.6■■□□□ 1.69
ACTR1A-203ENST00000480947 NUP160Q12769 1436 aa25.58■■□□□ 1.69
ACTR1A-203ENST00000480947 CLASP1Q7Z460 1538 aa25.58■■□□□ 1.68
ACTR1A-203ENST00000480947 CEP170Q5SW79 1584 aa25.53■■□□□ 1.68
ACTR1A-203ENST00000480947 PRXQ9BXM0 1461 aa25.5■■□□□ 1.67
ACTR1A-203ENST00000480947 RAPGEF2Q9Y4G8 1499 aa25.5■■□□□ 1.67
ACTR1A-203ENST00000480947 CSRNP3Q8WYN3 585 aa25.47■■□□□ 1.67
ACTR1A-203ENST00000480947 KIAA0586Q9BVV6 1533 aa25.38■■□□□ 1.65
ACTR1A-203ENST00000480947 SHROOM2Q13796 1616 aa25.36■■□□□ 1.65
ACTR1A-203ENST00000480947 ARHGEF11O15085 1522 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms