RNA–Protein interactions for RNA: ENST00000480937.5

TMEM50A-203, Transcript of transmembrane protein 50A, humanhuman

TSL 2

Gene TMEM50A, Length 1,102 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-203ENST00000480937 NISCHQ9Y2I1 1504 aa48.35■■■■■ 5.33
TMEM50A-203ENST00000480937 ABCC9O60706 1549 aa44.5■■■■■ 4.71
TMEM50A-203ENST00000480937 CCDC180Q9P1Z9 1646 aa43.64■■■■■ 4.58
TMEM50A-203ENST00000480937 DNAJC5BQ9UF47 199 aa42.37■■■■■ 4.37
TMEM50A-203ENST00000480937 RB1CC1Q8TDY2 1594 aa41.95■■■■■ 4.31
TMEM50A-203ENST00000480937 NACADO15069 1562 aa41.46■■■■■ 4.23
TMEM50A-203ENST00000480937 PABPN1Q86U42 306 aaKnown RBP eCLIP41.37■■■■■ 4.21
TMEM50A-203ENST00000480937 DCAF8L2P0C7V8 631 aa41.34■■■■■ 4.21
TMEM50A-203ENST00000480937 UNC13AQ9UPW8 1703 aa40.98■■■■■ 4.15
TMEM50A-203ENST00000480937 BICRAQ9NZM4 1560 aa40.74■■■■■ 4.11
TMEM50A-203ENST00000480937 MYO15BQ96JP2 1530 aa40.57■■■■■ 4.09
TMEM50A-203ENST00000480937 CECR2Q9BXF3 1484 aa40.13■■■■■ 4.02
TMEM50A-203ENST00000480937 CC2D2AQ9P2K1 1620 aa40.1■■■■■ 4.01
TMEM50A-203ENST00000480937 SHROOM4Q9ULL8 1493 aa40.05■■■■■ 4
TMEM50A-203ENST00000480937 ZCCHC6Q5VYS8 1495 aaKnown RBP39.91■■■■□ 3.98
TMEM50A-203ENST00000480937 SCRIBQ14160 1630 aa39.86■■■■□ 3.97
TMEM50A-203ENST00000480937 EIF4G1Q04637 1599 aaKnown RBP39.83■■■■□ 3.97
TMEM50A-203ENST00000480937 DCAF1Q9Y4B6 1507 aa39.81■■■■□ 3.96
TMEM50A-203ENST00000480937 DNAJC5Q9H3Z4 198 aa39.4■■■■□ 3.9
TMEM50A-203ENST00000480937 CUX2O14529 1486 aa38.56■■■■□ 3.76
TMEM50A-203ENST00000480937 ERCC6Q03468 1493 aa38.49■■■■□ 3.75
TMEM50A-203ENST00000480937 NCAPD3P42695 1498 aa38.28■■■■□ 3.72
TMEM50A-203ENST00000480937 ATAD2BQ9ULI0 1458 aa38.11■■■■□ 3.69
TMEM50A-203ENST00000480937 NESP48681 1621 aa38.01■■■■□ 3.68
TMEM50A-203ENST00000480937 SMARCA2P51531 1590 aa37.94■■■■□ 3.66
TMEM50A-203ENST00000480937 HMGXB3Q12766 1538 aa37.93■■■■□ 3.66
TMEM50A-203ENST00000480937 SMARCA4P51532 1647 aa37.88■■■■□ 3.65
TMEM50A-203ENST00000480937 BAZ1BQ9UIG0 1483 aaKnown RBP37.74■■■■□ 3.63
TMEM50A-203ENST00000480937 THOC2Q8NI27 1593 aaKnown RBP37.69■■■■□ 3.62
TMEM50A-203ENST00000480937 BAZ1AQ9NRL2 1556 aaPredicted RBP37.59■■■■□ 3.61
TMEM50A-203ENST00000480937 LAMC3Q9Y6N6 1575 aa37.55■■■■□ 3.6
TMEM50A-203ENST00000480937 TRIM41Q8WV44 630 aa37.52■■■■□ 3.6
TMEM50A-203ENST00000480937 KIF21AQ7Z4S6 1674 aa37.46■■■■□ 3.59
TMEM50A-203ENST00000480937 PEG3Q9GZU2 1588 aa37.45■■■■□ 3.59
TMEM50A-203ENST00000480937 PDS5BQ9NTI5 1447 aa37.4■■■■□ 3.58
TMEM50A-203ENST00000480937 MROH2BQ7Z745 1585 aa37.28■■■■□ 3.56
TMEM50A-203ENST00000480937 CADPSQ9ULU8 1353 aa37.14■■■■□ 3.54
TMEM50A-203ENST00000480937 MRC2Q9UBG0 1479 aa37.12■■■■□ 3.53
TMEM50A-203ENST00000480937 WDR62O43379 1518 aa37.01■■■■□ 3.52
TMEM50A-203ENST00000480937 CEP164Q9UPV0 1460 aa36.84■■■■□ 3.49
TMEM50A-203ENST00000480937 WIZO95785 1651 aa36.81■■■■□ 3.48
TMEM50A-203ENST00000480937 OSCARQ8IYS5 282 aa36.76■■■■□ 3.48
TMEM50A-203ENST00000480937 FANCD2Q9BXW9 1451 aa36.75■■■■□ 3.47
TMEM50A-203ENST00000480937 CFTRP13569 1480 aa36.54■■■■□ 3.44
TMEM50A-203ENST00000480937 URB2Q14146 1524 aaKnown RBP36.48■■■■□ 3.43
TMEM50A-203ENST00000480937 RIMBP3CA6NJZ7 1639 aa36.33■■■■□ 3.41
TMEM50A-203ENST00000480937 RIMBP3BA6NNM3 1639 aa36.33■■■■□ 3.41
TMEM50A-203ENST00000480937 RIMBP3Q9UFD9 1639 aa36.33■■■■□ 3.41
TMEM50A-203ENST00000480937 TOP2AP11388 1531 aaKnown RBP36.26■■■■□ 3.4
TMEM50A-203ENST00000480937 RSF1Q96T23 1441 aaPredicted RBP36.25■■■■□ 3.39
TMEM50A-203ENST00000480937 ZNF608Q9ULD9 1512 aaPredicted RBP36.17■■■■□ 3.38
TMEM50A-203ENST00000480937 ARHGEF11O15085 1522 aa36.14■■■■□ 3.38
TMEM50A-203ENST00000480937 IFT140Q96RY7 1462 aa36.11■■■■□ 3.37
TMEM50A-203ENST00000480937 PRDM2Q13029 1718 aa36.06■■■■□ 3.36
TMEM50A-203ENST00000480937 CYB5RLQ6IPT4 315 aa36■■■■□ 3.35
TMEM50A-203ENST00000480937 TOPBP1Q92547 1522 aa35.94■■■■□ 3.34
TMEM50A-203ENST00000480937 EIF4G3O43432 1585 aaKnown RBP35.89■■■■□ 3.34
TMEM50A-203ENST00000480937 CCDC88BA6NC98 1476 aa35.89■■■■□ 3.34
TMEM50A-203ENST00000480937 TRHP20396 242 aaPredicted RBP35.89■■■■□ 3.34
TMEM50A-203ENST00000480937 CHD1O14646 1710 aa35.77■■■■□ 3.32
TMEM50A-203ENST00000480937 ABCC8Q09428 1581 aa35.77■■■■□ 3.32
TMEM50A-203ENST00000480937 FBLN2P98095 1184 aa35.77■■■■□ 3.32
TMEM50A-203ENST00000480937 AQRO60306 1485 aaKnown RBP eCLIP35.76■■■■□ 3.323e-6■■□□□ 14.2
TMEM50A-203ENST00000480937 ARAP1Q96P48 1450 aa35.74■■■■□ 3.31
TMEM50A-203ENST00000480937 DNMBPQ6XZF7 1577 aa35.73■■■■□ 3.31
TMEM50A-203ENST00000480937 TARBP1Q13395 1621 aaKnown RBP35.65■■■■□ 3.3
TMEM50A-203ENST00000480937 POLA1P09884 1462 aaPredicted RBP35.54■■■■□ 3.28
TMEM50A-203ENST00000480937 RAD54L2Q9Y4B4 1467 aa35.47■■■■□ 3.27
TMEM50A-203ENST00000480937 TDRD9Q8NDG6 1382 aaKnown RBP35.45■■■■□ 3.27
TMEM50A-203ENST00000480937 SOGA1O94964 1423 aa35.39■■■■□ 3.26
TMEM50A-203ENST00000480937 AEBP2Q6ZN18 517 aaPredicted RBP35.37■■■■□ 3.25
TMEM50A-203ENST00000480937 SNAPC4Q5SXM2 1469 aa35.36■■■■□ 3.25
TMEM50A-203ENST00000480937 CHMP7Q8WUX9 453 aaPredicted RBP35.33■■■■□ 3.25
TMEM50A-203ENST00000480937 CLASP1Q7Z460 1538 aa35.31■■■■□ 3.24
TMEM50A-203ENST00000480937 SYNJ1O43426 1573 aa35.25■■■■□ 3.23
TMEM50A-203ENST00000480937 FGD5Q6ZNL6 1462 aa35.22■■■■□ 3.23
TMEM50A-203ENST00000480937 MAGI1Q96QZ7 1491 aaPredicted RBP35.19■■■■□ 3.22
TMEM50A-203ENST00000480937 WDR97A6NE52 1622 aa35.17■■■■□ 3.22
TMEM50A-203ENST00000480937 GRIN2BQ13224 1484 aa35.14■■■■□ 3.22
TMEM50A-203ENST00000480937 SYNJ2O15056 1496 aa35.1■■■■□ 3.21
TMEM50A-203ENST00000480937 CUX1P39880 1505 aa35.07■■■■□ 3.21
TMEM50A-203ENST00000480937 GAPVD1Q14C86 1478 aa35.04■■■■□ 3.2
TMEM50A-203ENST00000480937 PBRM1Q86U86 1689 aa34.94■■■■□ 3.18
TMEM50A-203ENST00000480937 ERCC6L2Q5T890 1561 aa34.77■■■■□ 3.16
TMEM50A-203ENST00000480937 ABCA10Q8WWZ4 1543 aa34.75■■■■□ 3.15
TMEM50A-203ENST00000480937 ABCA5Q8WWZ7 1642 aa34.74■■■■□ 3.15
TMEM50A-203ENST00000480937 GRIN2AQ12879 1464 aa34.69■■■■□ 3.14
TMEM50A-203ENST00000480937 CEP170Q5SW79 1584 aa34.63■■■■□ 3.13
TMEM50A-203ENST00000480937 NUP160Q12769 1436 aa34.57■■■■□ 3.13
TMEM50A-203ENST00000480937 ADAMTS12P58397 1594 aa34.56■■■■□ 3.12
TMEM50A-203ENST00000480937 WRNQ14191 1432 aaPredicted RBP eCLIP34.51■■■■□ 3.12
TMEM50A-203ENST00000480937 SHROOM2Q13796 1616 aa34.47■■■■□ 3.11
TMEM50A-203ENST00000480937 FHAD1B1AJZ9 1412 aa34.45■■■■□ 3.11
TMEM50A-203ENST00000480937 KIF13AQ9H1H9 1805 aa34.44■■■■□ 3.1
TMEM50A-203ENST00000480937 PRG4Q92954 1404 aaPredicted RBP34.37■■■■□ 3.09
TMEM50A-203ENST00000480937 FAM69CQ0P6D2 419 aa34.29■■■■□ 3.08
TMEM50A-203ENST00000480937 ERICH3Q5RHP9 1530 aa34.29■■■■□ 3.08
TMEM50A-203ENST00000480937 JPH4Q96JJ6 628 aa34.28■■■■□ 3.08
TMEM50A-203ENST00000480937 TOP2BQ02880 1626 aa34.28■■■■□ 3.08
TMEM50A-203ENST00000480937 BIVM-ERCC5R4GMW8 1640 aa34.27■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms