RNA–Protein interactions for RNA: ENST00000480590.1

JMJD4-204, Transcript of jumonji domain containing 4, humanhuman

TSL 2

Gene JMJD4, Length 891 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JMJD4-204ENST00000480590 NISCHQ9Y2I1 1504 aa31.55■■■□□ 2.64
JMJD4-204ENST00000480590 CCDC180Q9P1Z9 1646 aa28.3■■■□□ 2.12
JMJD4-204ENST00000480590 ABCC9O60706 1549 aa28.27■■■□□ 2.12
JMJD4-204ENST00000480590 RB1CC1Q8TDY2 1594 aa26.98■■□□□ 1.91
JMJD4-204ENST00000480590 NACADO15069 1562 aa26.83■■□□□ 1.89
JMJD4-204ENST00000480590 DCAF8L2P0C7V8 631 aa26.72■■□□□ 1.87
JMJD4-204ENST00000480590 DNAJC5BQ9UF47 199 aa26.5■■□□□ 1.83
JMJD4-204ENST00000480590 MYO15BQ96JP2 1530 aa26.49■■□□□ 1.83
JMJD4-204ENST00000480590 PABPN1Q86U42 306 aaKnown RBP eCLIP26.35■■□□□ 1.81
JMJD4-204ENST00000480590 UNC13AQ9UPW8 1703 aa26.18■■□□□ 1.78
JMJD4-204ENST00000480590 DCAF1Q9Y4B6 1507 aa26.13■■□□□ 1.77
JMJD4-204ENST00000480590 ZCCHC6Q5VYS8 1495 aaKnown RBP26.12■■□□□ 1.77
JMJD4-204ENST00000480590 BICRAQ9NZM4 1560 aa26.07■■□□□ 1.76
JMJD4-204ENST00000480590 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
JMJD4-204ENST00000480590 SCRIBQ14160 1630 aa25.71■■□□□ 1.71
JMJD4-204ENST00000480590 CC2D2AQ9P2K1 1620 aa25.52■■□□□ 1.68
JMJD4-204ENST00000480590 CECR2Q9BXF3 1484 aa25.52■■□□□ 1.68
JMJD4-204ENST00000480590 EIF4G1Q04637 1599 aaKnown RBP25.49■■□□□ 1.67
JMJD4-204ENST00000480590 NCAPD3P42695 1498 aa24.77■■□□□ 1.56
JMJD4-204ENST00000480590 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.54
JMJD4-204ENST00000480590 SMARCA2P51531 1590 aa24.62■■□□□ 1.53
JMJD4-204ENST00000480590 SMARCA4P51532 1647 aa24.57■■□□□ 1.52
JMJD4-204ENST00000480590 HMGXB3Q12766 1538 aa24.54■■□□□ 1.52
JMJD4-204ENST00000480590 BAZ1AQ9NRL2 1556 aaPredicted RBP24.53■■□□□ 1.52
JMJD4-204ENST00000480590 ERCC6Q03468 1493 aa24.49■■□□□ 1.51
JMJD4-204ENST00000480590 DNAJC5Q9H3Z4 198 aa24.47■■□□□ 1.51
JMJD4-204ENST00000480590 CUX2O14529 1486 aa24.46■■□□□ 1.51
JMJD4-204ENST00000480590 BAZ1BQ9UIG0 1483 aaKnown RBP24.43■■□□□ 1.5
JMJD4-204ENST00000480590 PEG3Q9GZU2 1588 aa24.38■■□□□ 1.49
JMJD4-204ENST00000480590 MROH2BQ7Z745 1585 aa24.25■■□□□ 1.47
JMJD4-204ENST00000480590 NESP48681 1621 aa24.24■■□□□ 1.47
JMJD4-204ENST00000480590 LAMC3Q9Y6N6 1575 aa24.18■■□□□ 1.46
JMJD4-204ENST00000480590 PDS5BQ9NTI5 1447 aa24.12■■□□□ 1.45
JMJD4-204ENST00000480590 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
JMJD4-204ENST00000480590 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
JMJD4-204ENST00000480590 WIZO95785 1651 aa23.92■■□□□ 1.42
JMJD4-204ENST00000480590 KIF21AQ7Z4S6 1674 aa23.89■■□□□ 1.42
JMJD4-204ENST00000480590 MRC2Q9UBG0 1479 aa23.82■■□□□ 1.4
JMJD4-204ENST00000480590 RSF1Q96T23 1441 aaPredicted RBP23.81■■□□□ 1.4
JMJD4-204ENST00000480590 CEP164Q9UPV0 1460 aa23.74■■□□□ 1.39
JMJD4-204ENST00000480590 WDR62O43379 1518 aa23.74■■□□□ 1.39
JMJD4-204ENST00000480590 CFTRP13569 1480 aa23.72■■□□□ 1.39
JMJD4-204ENST00000480590 TOP2AP11388 1531 aaKnown RBP23.7■■□□□ 1.38
JMJD4-204ENST00000480590 FANCD2Q9BXW9 1451 aa23.7■■□□□ 1.38
JMJD4-204ENST00000480590 URB2Q14146 1524 aaKnown RBP23.44■■□□□ 1.34
JMJD4-204ENST00000480590 CCDC88BA6NC98 1476 aa23.44■■□□□ 1.34
JMJD4-204ENST00000480590 OSCARQ8IYS5 282 aa23.43■■□□□ 1.34
JMJD4-204ENST00000480590 PRDM2Q13029 1718 aa23.38■■□□□ 1.33
JMJD4-204ENST00000480590 TRIM41Q8WV44 630 aa23.34■■□□□ 1.33
JMJD4-204ENST00000480590 ABCC8Q09428 1581 aa23.32■■□□□ 1.32
JMJD4-204ENST00000480590 IFT140Q96RY7 1462 aa23.3■■□□□ 1.32
JMJD4-204ENST00000480590 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
JMJD4-204ENST00000480590 DNMBPQ6XZF7 1577 aa23.15■■□□□ 1.3
JMJD4-204ENST00000480590 ZNF608Q9ULD9 1512 aaPredicted RBP23.14■■□□□ 1.3
JMJD4-204ENST00000480590 EIF4G3O43432 1585 aaKnown RBP23.01■■□□□ 1.27
JMJD4-204ENST00000480590 POLA1P09884 1462 aaPredicted RBP22.99■■□□□ 1.27
JMJD4-204ENST00000480590 AQRO60306 1485 aaKnown RBP eCLIP22.98■■□□□ 1.278e-8■■■■■ 35.6
JMJD4-204ENST00000480590 TARBP1Q13395 1621 aaKnown RBP22.98■■□□□ 1.27
JMJD4-204ENST00000480590 SOGA1O94964 1423 aa22.96■■□□□ 1.27
JMJD4-204ENST00000480590 FBLN2P98095 1184 aa22.92■■□□□ 1.26
JMJD4-204ENST00000480590 RIMBP3CA6NJZ7 1639 aa22.92■■□□□ 1.26
JMJD4-204ENST00000480590 RIMBP3BA6NNM3 1639 aa22.92■■□□□ 1.26
JMJD4-204ENST00000480590 RIMBP3Q9UFD9 1639 aa22.92■■□□□ 1.26
JMJD4-204ENST00000480590 ARHGEF11O15085 1522 aa22.89■■□□□ 1.26
JMJD4-204ENST00000480590 RAD54L2Q9Y4B4 1467 aa22.88■■□□□ 1.25
JMJD4-204ENST00000480590 WDR97A6NE52 1622 aa22.87■■□□□ 1.25
JMJD4-204ENST00000480590 TDRD9Q8NDG6 1382 aaKnown RBP22.87■■□□□ 1.25
JMJD4-204ENST00000480590 FGD5Q6ZNL6 1462 aa22.84■■□□□ 1.25
JMJD4-204ENST00000480590 CYB5RLQ6IPT4 315 aa22.81■■□□□ 1.24
JMJD4-204ENST00000480590 CHD1O14646 1710 aa22.8■■□□□ 1.24
JMJD4-204ENST00000480590 CHMP7Q8WUX9 453 aaPredicted RBP22.8■■□□□ 1.24
JMJD4-204ENST00000480590 SUPT5HO00267 1087 aaKnown RBP22.79■■□□□ 1.24
JMJD4-204ENST00000480590 CUX1P39880 1505 aa22.78■■□□□ 1.24
JMJD4-204ENST00000480590 GRIN2BQ13224 1484 aa22.75■■□□□ 1.23
JMJD4-204ENST00000480590 MAGI1Q96QZ7 1491 aaPredicted RBP22.75■■□□□ 1.23
JMJD4-204ENST00000480590 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
JMJD4-204ENST00000480590 SYNJ1O43426 1573 aa22.67■■□□□ 1.22
JMJD4-204ENST00000480590 SYNJ2O15056 1496 aa22.66■■□□□ 1.22
JMJD4-204ENST00000480590 GAPVD1Q14C86 1478 aa22.66■■□□□ 1.22
JMJD4-204ENST00000480590 ARAP1Q96P48 1450 aa22.64■■□□□ 1.21
JMJD4-204ENST00000480590 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
JMJD4-204ENST00000480590 WRNQ14191 1432 aaPredicted RBP eCLIP22.6■■□□□ 1.21
JMJD4-204ENST00000480590 CLASP1Q7Z460 1538 aa22.6■■□□□ 1.21
JMJD4-204ENST00000480590 TRHP20396 242 aaPredicted RBP22.59■■□□□ 1.21
JMJD4-204ENST00000480590 PBRM1Q86U86 1689 aa22.52■■□□□ 1.2
JMJD4-204ENST00000480590 ABCA5Q8WWZ7 1642 aa22.51■■□□□ 1.19
JMJD4-204ENST00000480590 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
JMJD4-204ENST00000480590 BIVM-ERCC5R4GMW8 1640 aa22.43■■□□□ 1.18
JMJD4-204ENST00000480590 GRIN2AQ12879 1464 aa22.42■■□□□ 1.18
JMJD4-204ENST00000480590 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
JMJD4-204ENST00000480590 ERICH3Q5RHP9 1530 aa22.36■■□□□ 1.17
JMJD4-204ENST00000480590 NUP160Q12769 1436 aa22.35■■□□□ 1.17
JMJD4-204ENST00000480590 ADAMTS12P58397 1594 aa22.34■■□□□ 1.17
JMJD4-204ENST00000480590 CEP170Q5SW79 1584 aa22.26■■□□□ 1.15
JMJD4-204ENST00000480590 JPH4Q96JJ6 628 aa22.2■■□□□ 1.14
JMJD4-204ENST00000480590 SHROOM2Q13796 1616 aa22.2■■□□□ 1.14
JMJD4-204ENST00000480590 ERCC6L2Q5T890 1561 aa22.17■■□□□ 1.14
JMJD4-204ENST00000480590 PRG4Q92954 1404 aaPredicted RBP22.15■■□□□ 1.14
JMJD4-204ENST00000480590 KIF27Q86VH2 1401 aa22.13■■□□□ 1.13
JMJD4-204ENST00000480590 IGF1RP08069 1367 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms