RNA–Protein interactions for RNA: ENST00000480342.5

RERE-213, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-213ENST00000480342 NISCHQ9Y2I1 1504 aa21.14■□□□□ 0.98
RERE-213ENST00000480342 CCDC180Q9P1Z9 1646 aa18.68■□□□□ 0.58
RERE-213ENST00000480342 ZCCHC6Q5VYS8 1495 aaKnown RBP17.83■□□□□ 0.44
RERE-213ENST00000480342 DCAF1Q9Y4B6 1507 aa17.74■□□□□ 0.43
RERE-213ENST00000480342 MYO15BQ96JP2 1530 aa17.55■□□□□ 0.4
RERE-213ENST00000480342 NACADO15069 1562 aa17.27■□□□□ 0.36
RERE-213ENST00000480342 SHROOM4Q9ULL8 1493 aa17.14■□□□□ 0.33
RERE-213ENST00000480342 ABCC9O60706 1549 aa17.06■□□□□ 0.32
RERE-213ENST00000480342 RB1CC1Q8TDY2 1594 aa17.06■□□□□ 0.32
RERE-213ENST00000480342 SUPT5HO00267 1087 aaKnown RBP16.98■□□□□ 0.31
RERE-213ENST00000480342 DCAF8L2P0C7V8 631 aa16.88■□□□□ 0.29
RERE-213ENST00000480342 SCRIBQ14160 1630 aa16.8■□□□□ 0.28
RERE-213ENST00000480342 UNC13AQ9UPW8 1703 aa16.67■□□□□ 0.26
RERE-213ENST00000480342 HRCP23327 699 aa16.54■□□□□ 0.24
RERE-213ENST00000480342 PCGF6Q9BYE7 350 aa16.48■□□□□ 0.23
RERE-213ENST00000480342 CHIC1Q5VXU3 224 aa16.47■□□□□ 0.23
RERE-213ENST00000480342 BICRAQ9NZM4 1560 aa16.43■□□□□ 0.22
RERE-213ENST00000480342 BAZ1AQ9NRL2 1556 aaPredicted RBP16.39■□□□□ 0.21
RERE-213ENST00000480342 PPARGC1BQ86YN6 1023 aaKnown RBP16.37■□□□□ 0.21
RERE-213ENST00000480342 RSF1Q96T23 1441 aaPredicted RBP16.32■□□□□ 0.2
RERE-213ENST00000480342 SMARCA4P51532 1647 aa16.27■□□□□ 0.2
RERE-213ENST00000480342 PEG3Q9GZU2 1588 aa16.22■□□□□ 0.19
RERE-213ENST00000480342 MROH2BQ7Z745 1585 aa16.21■□□□□ 0.19
RERE-213ENST00000480342 CECR2Q9BXF3 1484 aa16.2■□□□□ 0.18
RERE-213ENST00000480342 LOC105371045A0A1W2PR82 267 aa16.18■□□□□ 0.18
RERE-213ENST00000480342 TOP2AP11388 1531 aaKnown RBP16.11■□□□□ 0.17
RERE-213ENST00000480342 WIZO95785 1651 aa16.1■□□□□ 0.17
RERE-213ENST00000480342 SMARCA2P51531 1590 aa16.05■□□□□ 0.16
RERE-213ENST00000480342 HMGXB3Q12766 1538 aa15.94■□□□□ 0.14
RERE-213ENST00000480342 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
RERE-213ENST00000480342 EIF4G1Q04637 1599 aaKnown RBP15.92■□□□□ 0.14
RERE-213ENST00000480342 TRIM26Q12899 539 aaPredicted RBP15.9■□□□□ 0.14
RERE-213ENST00000480342 ATAD2BQ9ULI0 1458 aa15.9■□□□□ 0.14
RERE-213ENST00000480342 NCAPD3P42695 1498 aa15.83■□□□□ 0.13
RERE-213ENST00000480342 BAZ1BQ9UIG0 1483 aaKnown RBP15.83■□□□□ 0.12
RERE-213ENST00000480342 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
RERE-213ENST00000480342 CCDC88BA6NC98 1476 aa15.77■□□□□ 0.11
RERE-213ENST00000480342 FAM9AQ8IZU1 332 aaPredicted RBP15.75■□□□□ 0.11
RERE-213ENST00000480342 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
RERE-213ENST00000480342 PRDM2Q13029 1718 aa15.66■□□□□ 0.1
RERE-213ENST00000480342 CC2D2AQ9P2K1 1620 aa15.63■□□□□ 0.09
RERE-213ENST00000480342 ZEB1P37275 1124 aaPredicted RBP15.61■□□□□ 0.09
RERE-213ENST00000480342 SCAF1Q9H7N4 1312 aaKnown RBP15.55■□□□□ 0.08
RERE-213ENST00000480342 CFTRP13569 1480 aa15.47■□□□□ 0.07
RERE-213ENST00000480342 BIVM-ERCC5R4GMW8 1640 aa15.44■□□□□ 0.06
RERE-213ENST00000480342 EEA1Q15075 1411 aa15.42■□□□□ 0.06
RERE-213ENST00000480342 PELP1Q8IZL8 1130 aaKnown RBP15.42■□□□□ 0.06
RERE-213ENST00000480342 TOP2BQ02880 1626 aa15.39■□□□□ 0.05
RERE-213ENST00000480342 WRNQ14191 1432 aaPredicted RBP eCLIP15.39■□□□□ 0.05
RERE-213ENST00000480342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.38■□□□□ 0.05
RERE-213ENST00000480342 ABCC8Q09428 1581 aa15.37■□□□□ 0.05
RERE-213ENST00000480342 LAMC3Q9Y6N6 1575 aa15.37■□□□□ 0.05
RERE-213ENST00000480342 CADPSQ9ULU8 1353 aa15.34■□□□□ 0.05
RERE-213ENST00000480342 CCER1Q8TC90 406 aaPredicted RBP15.32■□□□□ 0.04
RERE-213ENST00000480342 TTBK1Q5TCY1 1321 aaPredicted RBP15.32■□□□□ 0.04
RERE-213ENST00000480342 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
RERE-213ENST00000480342 NEUROD1Q13562 356 aa15.24■□□□□ 0.03
RERE-213ENST00000480342 ACIN1Q9UKV3 1341 aaKnown RBP15.21■□□□□ 0.03
RERE-213ENST00000480342 CUX1P39880 1505 aa15.2■□□□□ 0.02
RERE-213ENST00000480342 KIF21BO75037 1637 aa15.19■□□□□ 0.02
RERE-213ENST00000480342 DNMBPQ6XZF7 1577 aa15.18■□□□□ 0.02
RERE-213ENST00000480342 DIEXFQ68CQ4 756 aaKnown RBP15.16■□□□□ 0.02
RERE-213ENST00000480342 FANCD2Q9BXW9 1451 aa15.16■□□□□ 0.02
RERE-213ENST00000480342 GTF3C3Q9Y5Q9 886 aa15.15■□□□□ 0.02
RERE-213ENST00000480342 PDS5BQ9NTI5 1447 aa15.13■□□□□ 0.01
RERE-213ENST00000480342 CEP164Q9UPV0 1460 aa15.11■□□□□ 0.01
RERE-213ENST00000480342 ERICH3Q5RHP9 1530 aa15.09■□□□□ 0.01
RERE-213ENST00000480342 GOLGA3Q08378 1498 aa15.07■□□□□ 0
RERE-213ENST00000480342 CENPBP07199 599 aaPredicted RBP15.07■□□□□ 0
RERE-213ENST00000480342 SOGA1O94964 1423 aa15.05■□□□□ 0
RERE-213ENST00000480342 KIF27Q86VH2 1401 aa15.04■□□□□ -0
RERE-213ENST00000480342 WDR97A6NE52 1622 aa15.04■□□□□ -0
RERE-213ENST00000480342 KIF21AQ7Z4S6 1674 aa15.03■□□□□ -0
RERE-213ENST00000480342 TOPBP1Q92547 1522 aa15.03■□□□□ -0
RERE-213ENST00000480342 CSRNP3Q8WYN3 585 aa15.02□□□□□ -0.01
RERE-213ENST00000480342 YTHDC1Q96MU7 727 aaKnown RBP15.02□□□□□ -0.01
RERE-213ENST00000480342 TNIKQ9UKE5 1360 aa15.02□□□□□ -0.01
RERE-213ENST00000480342 FGD5Q6ZNL6 1462 aa15.01□□□□□ -0.01
RERE-213ENST00000480342 NESP48681 1621 aa15□□□□□ -0.01
RERE-213ENST00000480342 ABCA10Q8WWZ4 1543 aa14.99□□□□□ -0.01
RERE-213ENST00000480342 PRXQ9BXM0 1461 aa14.97□□□□□ -0.01
RERE-213ENST00000480342 CUL7Q14999 1698 aa14.95□□□□□ -0.02
RERE-213ENST00000480342 RUSC2Q8N2Y8 1516 aa14.95□□□□□ -0.02
RERE-213ENST00000480342 URB2Q14146 1524 aaKnown RBP14.95□□□□□ -0.02
RERE-213ENST00000480342 MRC2Q9UBG0 1479 aa14.94□□□□□ -0.02
RERE-213ENST00000480342 UBTFP17480 764 aaKnown RBP14.94□□□□□ -0.02
RERE-213ENST00000480342 POLA1P09884 1462 aaPredicted RBP14.93□□□□□ -0.02
RERE-213ENST00000480342 WDR62O43379 1518 aa14.92□□□□□ -0.02
RERE-213ENST00000480342 ABCA5Q8WWZ7 1642 aa14.9□□□□□ -0.02
RERE-213ENST00000480342 CEP162Q5TB80 1403 aa14.9□□□□□ -0.02
RERE-213ENST00000480342 ZNF316A6NFI3 1004 aaPredicted RBP14.9□□□□□ -0.02
RERE-213ENST00000480342 CUX2O14529 1486 aa14.88□□□□□ -0.03
RERE-213ENST00000480342 TARBP1Q13395 1621 aaKnown RBP14.87□□□□□ -0.03
RERE-213ENST00000480342 HNRNPUL2Q1KMD3 747 aaKnown RBP14.86□□□□□ -0.03
RERE-213ENST00000480342 THOC2Q8NI27 1593 aaKnown RBP14.84□□□□□ -0.03
RERE-213ENST00000480342 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
RERE-213ENST00000480342 MIER1Q8N108 512 aa14.82□□□□□ -0.04
RERE-213ENST00000480342 IFT140Q96RY7 1462 aa14.8□□□□□ -0.04
RERE-213ENST00000480342 PBRM1Q86U86 1689 aa14.79□□□□□ -0.04
RERE-213ENST00000480342 IGF1RP08069 1367 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms