RNA–Protein interactions for RNA: ENST00000479953.6

CFLAR-223, Transcript of CASP8 and FADD like apoptosis regulator, human

TSL 2 BASIC

Gene CFLAR, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CFLAR-223	ENST00000479953	AEBP2	Q6ZN18	517 aa	Predicted RBP	19.44	■□□□□ 0.7
CFLAR-223	ENST00000479953	CHIC1	Q5VXU3	224 aa		18.28	■□□□□ 0.52
CFLAR-223	ENST00000479953	NISCH	Q9Y2I1	1504 aa		17.16	■□□□□ 0.34
CFLAR-223	ENST00000479953	SENP3	Q9H4L4	574 aa	Predicted RBP	16.71	■□□□□ 0.27
CFLAR-223	ENST00000479953	PHF23	Q9BUL5	403 aa	Predicted RBP	16.41	■□□□□ 0.22
CFLAR-223	ENST00000479953	FOXD1	Q16676	465 aa		15.55	■□□□□ 0.08
CFLAR-223	ENST00000479953	CCDC180	Q9P1Z9	1646 aa		14.91	□□□□□ -0.02
CFLAR-223	ENST00000479953	POTED	Q86YR6	584 aa		14.73	□□□□□ -0.05
CFLAR-223	ENST00000479953	MSH5	O43196	834 aa		14.72	□□□□□ -0.05
CFLAR-223	ENST00000479953	PLPPR3	Q6T4P5	718 aa		14.55	□□□□□ -0.08
CFLAR-223	ENST00000479953	ABCC9	O60706	1549 aa		14.51	□□□□□ -0.09
CFLAR-223	ENST00000479953	PIAS4	Q8N2W9	510 aa	Predicted RBP	14.47	□□□□□ -0.09
CFLAR-223	ENST00000479953	ZCCHC6	Q5VYS8	1495 aa	Known RBP	14.36	□□□□□ -0.11
CFLAR-223	ENST00000479953	PPP6R1	Q9UPN7	881 aa		14.31	□□□□□ -0.12
CFLAR-223	ENST00000479953	ADRA2B	P18089	450 aa		14.25	□□□□□ -0.13
CFLAR-223	ENST00000479953	DCAF1	Q9Y4B6	1507 aa		14.19	□□□□□ -0.14
CFLAR-223	ENST00000479953	DCAF8L2	P0C7V8	631 aa		14.14	□□□□□ -0.15
CFLAR-223	ENST00000479953	MYO15B	Q96JP2	1530 aa		14.14	□□□□□ -0.15
CFLAR-223	ENST00000479953	NACAD	O15069	1562 aa		14.05	□□□□□ -0.16
CFLAR-223	ENST00000479953	RB1CC1	Q8TDY2	1594 aa		13.93	□□□□□ -0.18
CFLAR-223	ENST00000479953	DNAJC5B	Q9UF47	199 aa		13.83	□□□□□ -0.2
CFLAR-223	ENST00000479953	SHROOM4	Q9ULL8	1493 aa		13.73	□□□□□ -0.21
CFLAR-223	ENST00000479953	SCRIB	Q14160	1630 aa		13.71	□□□□□ -0.22
CFLAR-223	ENST00000479953	BICRA	Q9NZM4	1560 aa		13.71	□□□□□ -0.22
CFLAR-223	ENST00000479953	PABPN1	Q86U42	306 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
CFLAR-223	ENST00000479953	UNC13A	Q9UPW8	1703 aa		13.58	□□□□□ -0.24
CFLAR-223	ENST00000479953	CECR2	Q9BXF3	1484 aa		13.44	□□□□□ -0.26
CFLAR-223	ENST00000479953	MROH2B	Q7Z745	1585 aa		13.28	□□□□□ -0.28
CFLAR-223	ENST00000479953	RSF1	Q96T23	1441 aa	Predicted RBP	13.27	□□□□□ -0.29
CFLAR-223	ENST00000479953	EIF4G1	Q04637	1599 aa	Known RBP	13.23	□□□□□ -0.29
CFLAR-223	ENST00000479953	DMRT2	Q9Y5R5	561 aa		13.2	□□□□□ -0.3
CFLAR-223	ENST00000479953	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	13.16	□□□□□ -0.3
CFLAR-223	ENST00000479953	SMARCA4	P51532	1647 aa		13.16	□□□□□ -0.3
CFLAR-223	ENST00000479953	ATAD2B	Q9ULI0	1458 aa		13.15	□□□□□ -0.3
CFLAR-223	ENST00000479953	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.14	□□□□□ -0.31
CFLAR-223	ENST00000479953	SCAF1	Q9H7N4	1312 aa	Known RBP	13.13	□□□□□ -0.31
CFLAR-223	ENST00000479953	KCNA4	P22459	653 aa		13.13	□□□□□ -0.31
CFLAR-223	ENST00000479953	NCAPD3	P42695	1498 aa		13.1	□□□□□ -0.31
CFLAR-223	ENST00000479953	PEG3	Q9GZU2	1588 aa		13.09	□□□□□ -0.31
CFLAR-223	ENST00000479953	CC2D2A	Q9P2K1	1620 aa		13.08	□□□□□ -0.32
CFLAR-223	ENST00000479953	DNAJC5	Q9H3Z4	198 aa		13.05	□□□□□ -0.32
CFLAR-223	ENST00000479953	SUPT5H	O00267	1087 aa	Known RBP	13.04	□□□□□ -0.32
CFLAR-223	ENST00000479953	WIZ	O95785	1651 aa		13.03	□□□□□ -0.32
CFLAR-223	ENST00000479953	SMARCA2	P51531	1590 aa		12.98	□□□□□ -0.33
CFLAR-223	ENST00000479953	HMGXB3	Q12766	1538 aa		12.93	□□□□□ -0.34
CFLAR-223	ENST00000479953	BAZ1B	Q9UIG0	1483 aa	Known RBP	12.92	□□□□□ -0.34
CFLAR-223	ENST00000479953	TOP2A	P11388	1531 aa	Known RBP	12.91	□□□□□ -0.34
CFLAR-223	ENST00000479953	EHMT2	Q96KQ7	1210 aa		12.89	□□□□□ -0.35
CFLAR-223	ENST00000479953	CCDC88B	A6NC98	1476 aa		12.86	□□□□□ -0.35
CFLAR-223	ENST00000479953	PPP4R3CP	Q6ZMV5	832 aa		12.84	□□□□□ -0.35
CFLAR-223	ENST00000479953	CADPS	Q9ULU8	1353 aa		12.72	□□□□□ -0.37
CFLAR-223	ENST00000479953	CACNB1	Q02641	598 aa	Predicted RBP	12.72	□□□□□ -0.37
CFLAR-223	ENST00000479953	CFTR	P13569	1480 aa		12.71	□□□□□ -0.38
CFLAR-223	ENST00000479953	NES	P48681	1621 aa		12.7	□□□□□ -0.38
CFLAR-223	ENST00000479953	HOXD11	P31277	338 aa	Predicted RBP	12.62	□□□□□ -0.39
CFLAR-223	ENST00000479953	NCBP3	Q53F19	620 aa	Known RBP	12.6	□□□□□ -0.39
CFLAR-223	ENST00000479953	DCAF8L1	A6NGE4	600 aa		12.59	□□□□□ -0.39
CFLAR-223	ENST00000479953	SLC4A1AP	Q9BWU0	796 aa	Known RBP	12.58	□□□□□ -0.4
CFLAR-223	ENST00000479953	CUX2	O14529	1486 aa		12.57	□□□□□ -0.4
CFLAR-223	ENST00000479953	LAMC3	Q9Y6N6	1575 aa		12.53	□□□□□ -0.4
CFLAR-223	ENST00000479953	CNKSR2	Q8WXI2	1034 aa		12.51	□□□□□ -0.41
CFLAR-223	ENST00000479953	CSRNP3	Q8WYN3	585 aa		12.51	□□□□□ -0.41
CFLAR-223	ENST00000479953	FANCD2	Q9BXW9	1451 aa		12.51	□□□□□ -0.41
CFLAR-223	ENST00000479953	RNF39	Q9H2S5	420 aa		12.5	□□□□□ -0.41
CFLAR-223	ENST00000479953	PDS5B	Q9NTI5	1447 aa		12.49	□□□□□ -0.41
CFLAR-223	ENST00000479953	RNF216	Q9NWF9	866 aa	Predicted RBP	12.47	□□□□□ -0.41
CFLAR-223	ENST00000479953	ERCC6	Q03468	1493 aa		12.44	□□□□□ -0.42
CFLAR-223	ENST00000479953	URB2	Q14146	1524 aa	Known RBP	12.43	□□□□□ -0.42
CFLAR-223	ENST00000479953	CUX1	P39880	1505 aa		12.42	□□□□□ -0.42
CFLAR-223	ENST00000479953	NPM3	O75607	178 aa	Known RBP	12.41	□□□□□ -0.42
CFLAR-223	ENST00000479953	ABCC8	Q09428	1581 aa		12.41	□□□□□ -0.42
CFLAR-223	ENST00000479953	CEP164	Q9UPV0	1460 aa		12.4	□□□□□ -0.43
CFLAR-223	ENST00000479953	WRN	Q14191	1432 aa	Predicted RBP eCLIP	12.38	□□□□□ -0.43
CFLAR-223	ENST00000479953	MRC2	Q9UBG0	1479 aa		12.36	□□□□□ -0.43
CFLAR-223	ENST00000479953	TOPBP1	Q92547	1522 aa		12.36	□□□□□ -0.43
CFLAR-223	ENST00000479953	C1QBP	Q07021	282 aa	Known RBP	12.35	□□□□□ -0.43
CFLAR-223	ENST00000479953	SYNJ1	O43426	1573 aa		12.35	□□□□□ -0.43
CFLAR-223	ENST00000479953	KIF21A	Q7Z4S6	1674 aa		12.34	□□□□□ -0.43
CFLAR-223	ENST00000479953	THOC2	Q8NI27	1593 aa	Known RBP	12.34	□□□□□ -0.43
CFLAR-223	ENST00000479953	WDR62	O43379	1518 aa		12.33	□□□□□ -0.44
CFLAR-223	ENST00000479953	TRIM41	Q8WV44	630 aa		12.3	□□□□□ -0.44
CFLAR-223	ENST00000479953	POLA1	P09884	1462 aa	Predicted RBP	12.29	□□□□□ -0.44
CFLAR-223	ENST00000479953	DNMBP	Q6XZF7	1577 aa		12.29	□□□□□ -0.44
CFLAR-223	ENST00000479953	PRDM2	Q13029	1718 aa		12.28	□□□□□ -0.44
CFLAR-223	ENST00000479953	RAD54L2	Q9Y4B4	1467 aa		12.27	□□□□□ -0.44
CFLAR-223	ENST00000479953	TOP2B	Q02880	1626 aa		12.27	□□□□□ -0.44
CFLAR-223	ENST00000479953	FGD5	Q6ZNL6	1462 aa		12.27	□□□□□ -0.45
CFLAR-223	ENST00000479953	BIVM-ERCC5	R4GMW8	1640 aa		12.23	□□□□□ -0.45
CFLAR-223	ENST00000479953	SOGA1	O94964	1423 aa		12.23	□□□□□ -0.45
CFLAR-223	ENST00000479953	RUSC2	Q8N2Y8	1516 aa		12.22	□□□□□ -0.45
CFLAR-223	ENST00000479953	ZNF608	Q9ULD9	1512 aa	Predicted RBP	12.21	□□□□□ -0.46
CFLAR-223	ENST00000479953	ABCA10	Q8WWZ4	1543 aa		12.19	□□□□□ -0.46
CFLAR-223	ENST00000479953	TARBP1	Q13395	1621 aa	Known RBP	12.19	□□□□□ -0.46
CFLAR-223	ENST00000479953	TDRD9	Q8NDG6	1382 aa	Known RBP	12.18	□□□□□ -0.46
CFLAR-223	ENST00000479953	IFT140	Q96RY7	1462 aa		12.17	□□□□□ -0.46
CFLAR-223	ENST00000479953	IGF1R	P08069	1367 aa		12.16	□□□□□ -0.46
CFLAR-223	ENST00000479953	AQR	O60306	1485 aa	Known RBP eCLIP	12.15	□□□□□ -0.46	2e-8	■■■■■ 82.8
CFLAR-223	ENST00000479953	ZBTB22	O15209	634 aa		12.12	□□□□□ -0.47
CFLAR-223	ENST00000479953	WDR97	A6NE52	1622 aa		12.07	□□□□□ -0.48
CFLAR-223	ENST00000479953	KIF27	Q86VH2	1401 aa		12.06	□□□□□ -0.48

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