RNA–Protein interactions for RNA: ENST00000479689.1

SNX8-207, Transcript of sorting nexin 8, humanhuman

TSL 2

Gene SNX8, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-207ENST00000479689 NISCHQ9Y2I1 1504 aa23.84■■□□□ 1.41
SNX8-207ENST00000479689 ABCC9O60706 1549 aa21.39■■□□□ 1.02
SNX8-207ENST00000479689 CCDC180Q9P1Z9 1646 aa21.37■■□□□ 1.01
SNX8-207ENST00000479689 RB1CC1Q8TDY2 1594 aa20.35■□□□□ 0.85
SNX8-207ENST00000479689 DCAF8L2P0C7V8 631 aa20.23■□□□□ 0.83
SNX8-207ENST00000479689 NACADO15069 1562 aa20.2■□□□□ 0.82
SNX8-207ENST00000479689 DNAJC5BQ9UF47 199 aa19.96■□□□□ 0.79
SNX8-207ENST00000479689 PABPN1Q86U42 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
SNX8-207ENST00000479689 MYO15BQ96JP2 1530 aa19.89■□□□□ 0.77
SNX8-207ENST00000479689 UNC13AQ9UPW8 1703 aa19.85■□□□□ 0.77
SNX8-207ENST00000479689 ZCCHC6Q5VYS8 1495 aaKnown RBP19.77■□□□□ 0.76
SNX8-207ENST00000479689 BICRAQ9NZM4 1560 aa19.7■□□□□ 0.74
SNX8-207ENST00000479689 DCAF1Q9Y4B6 1507 aa19.66■□□□□ 0.74
SNX8-207ENST00000479689 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
SNX8-207ENST00000479689 SHROOM4Q9ULL8 1493 aa19.47■□□□□ 0.71
SNX8-207ENST00000479689 CC2D2AQ9P2K1 1620 aa19.29■□□□□ 0.68
SNX8-207ENST00000479689 CECR2Q9BXF3 1484 aa19.26■□□□□ 0.67
SNX8-207ENST00000479689 EIF4G1Q04637 1599 aaKnown RBP19.26■□□□□ 0.67
SNX8-207ENST00000479689 NCAPD3P42695 1498 aa18.63■□□□□ 0.57
SNX8-207ENST00000479689 SMARCA4P51532 1647 aa18.6■□□□□ 0.57
SNX8-207ENST00000479689 ATAD2BQ9ULI0 1458 aa18.6■□□□□ 0.57
SNX8-207ENST00000479689 SMARCA2P51531 1590 aa18.57■□□□□ 0.56
SNX8-207ENST00000479689 BAZ1AQ9NRL2 1556 aaPredicted RBP18.52■□□□□ 0.56
SNX8-207ENST00000479689 HMGXB3Q12766 1538 aa18.52■□□□□ 0.56
SNX8-207ENST00000479689 ERCC6Q03468 1493 aa18.52■□□□□ 0.55
SNX8-207ENST00000479689 BAZ1BQ9UIG0 1483 aaKnown RBP18.47■□□□□ 0.55
SNX8-207ENST00000479689 CUX2O14529 1486 aa18.39■□□□□ 0.53
SNX8-207ENST00000479689 MROH2BQ7Z745 1585 aa18.38■□□□□ 0.53
SNX8-207ENST00000479689 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
SNX8-207ENST00000479689 NESP48681 1621 aa18.37■□□□□ 0.53
SNX8-207ENST00000479689 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
SNX8-207ENST00000479689 LAMC3Q9Y6N6 1575 aa18.22■□□□□ 0.51
SNX8-207ENST00000479689 WIZO95785 1651 aa18.17■□□□□ 0.5
SNX8-207ENST00000479689 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
SNX8-207ENST00000479689 THOC2Q8NI27 1593 aaKnown RBP18.15■□□□□ 0.5
SNX8-207ENST00000479689 KIF21AQ7Z4S6 1674 aa18.12■□□□□ 0.49
SNX8-207ENST00000479689 CADPSQ9ULU8 1353 aa18.09■□□□□ 0.49
SNX8-207ENST00000479689 RSF1Q96T23 1441 aaPredicted RBP18.01■□□□□ 0.47
SNX8-207ENST00000479689 MRC2Q9UBG0 1479 aa18■□□□□ 0.47
SNX8-207ENST00000479689 TOP2AP11388 1531 aaKnown RBP17.95■□□□□ 0.46
SNX8-207ENST00000479689 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
SNX8-207ENST00000479689 WDR62O43379 1518 aa17.92■□□□□ 0.46
SNX8-207ENST00000479689 FANCD2Q9BXW9 1451 aa17.91■□□□□ 0.46
SNX8-207ENST00000479689 CFTRP13569 1480 aa17.88■□□□□ 0.45
SNX8-207ENST00000479689 URB2Q14146 1524 aaKnown RBP17.74■□□□□ 0.43
SNX8-207ENST00000479689 CCDC88BA6NC98 1476 aa17.73■□□□□ 0.43
SNX8-207ENST00000479689 PRDM2Q13029 1718 aa17.71■□□□□ 0.43
SNX8-207ENST00000479689 TRIM41Q8WV44 630 aa17.64■□□□□ 0.41
SNX8-207ENST00000479689 OSCARQ8IYS5 282 aa17.58■□□□□ 0.4
SNX8-207ENST00000479689 TOPBP1Q92547 1522 aa17.57■□□□□ 0.4
SNX8-207ENST00000479689 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
SNX8-207ENST00000479689 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
SNX8-207ENST00000479689 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.4
SNX8-207ENST00000479689 DNMBPQ6XZF7 1577 aa17.51■□□□□ 0.39
SNX8-207ENST00000479689 EIF4G3O43432 1585 aaKnown RBP17.45■□□□□ 0.38
SNX8-207ENST00000479689 POLA1P09884 1462 aaPredicted RBP17.39■□□□□ 0.37
SNX8-207ENST00000479689 AQRO60306 1485 aaKnown RBP eCLIP17.38■□□□□ 0.37
SNX8-207ENST00000479689 TARBP1Q13395 1621 aaKnown RBP17.37■□□□□ 0.37
SNX8-207ENST00000479689 SUPT5HO00267 1087 aaKnown RBP17.34■□□□□ 0.37
SNX8-207ENST00000479689 FBLN2P98095 1184 aa17.34■□□□□ 0.37
SNX8-207ENST00000479689 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
SNX8-207ENST00000479689 RIMBP3CA6NJZ7 1639 aa17.33■□□□□ 0.37
SNX8-207ENST00000479689 RIMBP3BA6NNM3 1639 aa17.33■□□□□ 0.37
SNX8-207ENST00000479689 RIMBP3Q9UFD9 1639 aa17.33■□□□□ 0.37
SNX8-207ENST00000479689 SOGA1O94964 1423 aa17.32■□□□□ 0.36
SNX8-207ENST00000479689 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
SNX8-207ENST00000479689 CHD1O14646 1710 aa17.3■□□□□ 0.36
SNX8-207ENST00000479689 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
SNX8-207ENST00000479689 ARHGEF11O15085 1522 aa17.29■□□□□ 0.36
SNX8-207ENST00000479689 CUX1P39880 1505 aa17.27■□□□□ 0.36
SNX8-207ENST00000479689 SNAPC4Q5SXM2 1469 aa17.22■□□□□ 0.35
SNX8-207ENST00000479689 WDR97A6NE52 1622 aa17.21■□□□□ 0.35
SNX8-207ENST00000479689 CYB5RLQ6IPT4 315 aa17.19■□□□□ 0.34
SNX8-207ENST00000479689 CHMP7Q8WUX9 453 aaPredicted RBP17.18■□□□□ 0.34
SNX8-207ENST00000479689 GRIN2BQ13224 1484 aa17.17■□□□□ 0.34
SNX8-207ENST00000479689 MAGI1Q96QZ7 1491 aaPredicted RBP17.16■□□□□ 0.34
SNX8-207ENST00000479689 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
SNX8-207ENST00000479689 ARAP1Q96P48 1450 aa17.12■□□□□ 0.33
SNX8-207ENST00000479689 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
SNX8-207ENST00000479689 SYNJ2O15056 1496 aa17.11■□□□□ 0.33
SNX8-207ENST00000479689 PBRM1Q86U86 1689 aa17.1■□□□□ 0.33
SNX8-207ENST00000479689 ABCA10Q8WWZ4 1543 aa17.08■□□□□ 0.32
SNX8-207ENST00000479689 CLASP1Q7Z460 1538 aa17.07■□□□□ 0.32
SNX8-207ENST00000479689 WRNQ14191 1432 aaPredicted RBP eCLIP17.05■□□□□ 0.32
SNX8-207ENST00000479689 ABCA5Q8WWZ7 1642 aa17.05■□□□□ 0.32
SNX8-207ENST00000479689 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
SNX8-207ENST00000479689 TOP2BQ02880 1626 aa17■□□□□ 0.31
SNX8-207ENST00000479689 BIVM-ERCC5R4GMW8 1640 aa16.99■□□□□ 0.31
SNX8-207ENST00000479689 ADAMTS12P58397 1594 aa16.94■□□□□ 0.3
SNX8-207ENST00000479689 GRIN2AQ12879 1464 aa16.94■□□□□ 0.3
SNX8-207ENST00000479689 FHAD1B1AJZ9 1412 aa16.89■□□□□ 0.29
SNX8-207ENST00000479689 ERICH3Q5RHP9 1530 aa16.87■□□□□ 0.29
SNX8-207ENST00000479689 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
SNX8-207ENST00000479689 NUP160Q12769 1436 aa16.86■□□□□ 0.29
SNX8-207ENST00000479689 ERCC6L2Q5T890 1561 aa16.83■□□□□ 0.28
SNX8-207ENST00000479689 SHROOM2Q13796 1616 aa16.77■□□□□ 0.27
SNX8-207ENST00000479689 PRG4Q92954 1404 aaPredicted RBP16.74■□□□□ 0.27
SNX8-207ENST00000479689 KIF27Q86VH2 1401 aa16.71■□□□□ 0.27
SNX8-207ENST00000479689 JPH4Q96JJ6 628 aa16.71■□□□□ 0.27
SNX8-207ENST00000479689 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms