RNA–Protein interactions for RNA: ENST00000479344.1

USP21-204, Transcript of ubiquitin specific peptidase 21, humanhuman

TSL 2

Gene USP21, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP21-204ENST00000479344 NISCHQ9Y2I1 1504 aa52.44■■■■■ 5.98
USP21-204ENST00000479344 CCDC180Q9P1Z9 1646 aa46.82■■■■■ 5.09
USP21-204ENST00000479344 ABCC9O60706 1549 aa46.52■■■■■ 5.04
USP21-204ENST00000479344 RB1CC1Q8TDY2 1594 aa44.35■■■■■ 4.69
USP21-204ENST00000479344 NACADO15069 1562 aa44.15■■■■■ 4.66
USP21-204ENST00000479344 DCAF8L2P0C7V8 631 aa44.06■■■■■ 4.64
USP21-204ENST00000479344 MYO15BQ96JP2 1530 aa43.67■■■■■ 4.58
USP21-204ENST00000479344 ZCCHC6Q5VYS8 1495 aaKnown RBP43.54■■■■■ 4.56
USP21-204ENST00000479344 UNC13AQ9UPW8 1703 aa43.51■■■■■ 4.56
USP21-204ENST00000479344 PABPN1Q86U42 306 aaKnown RBP eCLIP43.4■■■■■ 4.54
USP21-204ENST00000479344 DNAJC5BQ9UF47 199 aa43.4■■■■■ 4.54
USP21-204ENST00000479344 DCAF1Q9Y4B6 1507 aa43.27■■■■■ 4.52
USP21-204ENST00000479344 BICRAQ9NZM4 1560 aa43.2■■■■■ 4.51
USP21-204ENST00000479344 SCRIBQ14160 1630 aa42.77■■■■■ 4.44
USP21-204ENST00000479344 SHROOM4Q9ULL8 1493 aa42.43■■■■■ 4.38
USP21-204ENST00000479344 CC2D2AQ9P2K1 1620 aa42.03■■■■■ 4.32
USP21-204ENST00000479344 EIF4G1Q04637 1599 aaKnown RBP42.03■■■■■ 4.32
USP21-204ENST00000479344 CECR2Q9BXF3 1484 aa41.81■■■■■ 4.28
USP21-204ENST00000479344 SMARCA4P51532 1647 aa40.82■■■■■ 4.13
USP21-204ENST00000479344 NCAPD3P42695 1498 aa40.8■■■■■ 4.12
USP21-204ENST00000479344 ATAD2BQ9ULI0 1458 aa40.76■■■■■ 4.12
USP21-204ENST00000479344 BAZ1AQ9NRL2 1556 aaPredicted RBP40.61■■■■■ 4.09
USP21-204ENST00000479344 SMARCA2P51531 1590 aa40.59■■■■■ 4.09
USP21-204ENST00000479344 HMGXB3Q12766 1538 aa40.51■■■■■ 4.08
USP21-204ENST00000479344 MROH2BQ7Z745 1585 aa40.47■■■■■ 4.07
USP21-204ENST00000479344 PEG3Q9GZU2 1588 aa40.4■■■■■ 4.06
USP21-204ENST00000479344 BAZ1BQ9UIG0 1483 aaKnown RBP40.33■■■■■ 4.05
USP21-204ENST00000479344 NESP48681 1621 aa40.13■■■■■ 4.02
USP21-204ENST00000479344 ERCC6Q03468 1493 aa40.02■■■■■ 4
USP21-204ENST00000479344 WIZO95785 1651 aa40■■■■□ 3.99
USP21-204ENST00000479344 CUX2O14529 1486 aa39.81■■■■□ 3.96
USP21-204ENST00000479344 LAMC3Q9Y6N6 1575 aa39.78■■■■□ 3.96
USP21-204ENST00000479344 RSF1Q96T23 1441 aaPredicted RBP39.74■■■■□ 3.95
USP21-204ENST00000479344 KIF21AQ7Z4S6 1674 aa39.6■■■■□ 3.93
USP21-204ENST00000479344 THOC2Q8NI27 1593 aaKnown RBP39.59■■■■□ 3.93
USP21-204ENST00000479344 CADPSQ9ULU8 1353 aa39.58■■■■□ 3.93
USP21-204ENST00000479344 DNAJC5Q9H3Z4 198 aa39.57■■■■□ 3.93
USP21-204ENST00000479344 PDS5BQ9NTI5 1447 aa39.49■■■■□ 3.91
USP21-204ENST00000479344 TOP2AP11388 1531 aaKnown RBP39.45■■■■□ 3.91
USP21-204ENST00000479344 CFTRP13569 1480 aa39.23■■■■□ 3.87
USP21-204ENST00000479344 MRC2Q9UBG0 1479 aa39.19■■■■□ 3.86
USP21-204ENST00000479344 FANCD2Q9BXW9 1451 aa39.12■■■■□ 3.85
USP21-204ENST00000479344 WDR62O43379 1518 aa39.11■■■■□ 3.85
USP21-204ENST00000479344 CEP164Q9UPV0 1460 aa39.1■■■■□ 3.85
USP21-204ENST00000479344 CCDC88BA6NC98 1476 aa39.05■■■■□ 3.84
USP21-204ENST00000479344 PRDM2Q13029 1718 aa38.85■■■■□ 3.81
USP21-204ENST00000479344 URB2Q14146 1524 aaKnown RBP38.84■■■■□ 3.81
USP21-204ENST00000479344 TOPBP1Q92547 1522 aa38.46■■■■□ 3.75
USP21-204ENST00000479344 DNMBPQ6XZF7 1577 aa38.32■■■■□ 3.73
USP21-204ENST00000479344 ZNF608Q9ULD9 1512 aaPredicted RBP38.32■■■■□ 3.72
USP21-204ENST00000479344 IFT140Q96RY7 1462 aa38.3■■■■□ 3.72
USP21-204ENST00000479344 ABCC8Q09428 1581 aa38.27■■■■□ 3.72
USP21-204ENST00000479344 SUPT5HO00267 1087 aaKnown RBP38.27■■■■□ 3.72
USP21-204ENST00000479344 TARBP1Q13395 1621 aaKnown RBP38.12■■■■□ 3.69
USP21-204ENST00000479344 POLA1P09884 1462 aaPredicted RBP38.09■■■■□ 3.69
USP21-204ENST00000479344 OSCARQ8IYS5 282 aa38.08■■■■□ 3.69
USP21-204ENST00000479344 EIF4G3O43432 1585 aaKnown RBP38.07■■■■□ 3.69
USP21-204ENST00000479344 AQRO60306 1485 aaKnown RBP eCLIP38■■■■□ 3.671e-6■■■■■ 30.4
USP21-204ENST00000479344 RAD54L2Q9Y4B4 1467 aa38■■■■□ 3.67
USP21-204ENST00000479344 CUX1P39880 1505 aa37.98■■■■□ 3.67
USP21-204ENST00000479344 FGD5Q6ZNL6 1462 aa37.91■■■■□ 3.66
USP21-204ENST00000479344 SOGA1O94964 1423 aa37.89■■■■□ 3.66
USP21-204ENST00000479344 TRIM41Q8WV44 630 aa37.85■■■■□ 3.65
USP21-204ENST00000479344 TDRD9Q8NDG6 1382 aaKnown RBP37.81■■■■□ 3.64
USP21-204ENST00000479344 CHD1O14646 1710 aa37.74■■■■□ 3.63
USP21-204ENST00000479344 WDR97A6NE52 1622 aa37.65■■■■□ 3.62
USP21-204ENST00000479344 RIMBP3CA6NJZ7 1639 aa37.63■■■■□ 3.61
USP21-204ENST00000479344 RIMBP3BA6NNM3 1639 aa37.63■■■■□ 3.61
USP21-204ENST00000479344 RIMBP3Q9UFD9 1639 aa37.63■■■■□ 3.61
USP21-204ENST00000479344 FBLN2P98095 1184 aa37.59■■■■□ 3.61
USP21-204ENST00000479344 SNAPC4Q5SXM2 1469 aa37.58■■■■□ 3.61
USP21-204ENST00000479344 ARHGEF11O15085 1522 aa37.52■■■■□ 3.6
USP21-204ENST00000479344 GRIN2BQ13224 1484 aa37.49■■■■□ 3.59
USP21-204ENST00000479344 ABCA10Q8WWZ4 1543 aa37.48■■■■□ 3.59
USP21-204ENST00000479344 SYNJ1O43426 1573 aa37.46■■■■□ 3.59
USP21-204ENST00000479344 MAGI1Q96QZ7 1491 aaPredicted RBP37.45■■■■□ 3.59
USP21-204ENST00000479344 BIVM-ERCC5R4GMW8 1640 aa37.44■■■■□ 3.58
USP21-204ENST00000479344 GAPVD1Q14C86 1478 aa37.44■■■■□ 3.58
USP21-204ENST00000479344 PBRM1Q86U86 1689 aa37.43■■■■□ 3.58
USP21-204ENST00000479344 WRNQ14191 1432 aaPredicted RBP eCLIP37.43■■■■□ 3.58
USP21-204ENST00000479344 TOP2BQ02880 1626 aa37.43■■■■□ 3.58
USP21-204ENST00000479344 ABCA5Q8WWZ7 1642 aa37.42■■■■□ 3.58
USP21-204ENST00000479344 CHMP7Q8WUX9 453 aaPredicted RBP37.35■■■■□ 3.57
USP21-204ENST00000479344 SYNJ2O15056 1496 aa37.33■■■■□ 3.57
USP21-204ENST00000479344 CLASP1Q7Z460 1538 aa37.31■■■■□ 3.56
USP21-204ENST00000479344 ARAP1Q96P48 1450 aa37.22■■■■□ 3.55
USP21-204ENST00000479344 CYB5RLQ6IPT4 315 aa37.22■■■■□ 3.55
USP21-204ENST00000479344 ADAMTS12P58397 1594 aa37.09■■■■□ 3.53
USP21-204ENST00000479344 GRIN2AQ12879 1464 aa37.04■■■■□ 3.52
USP21-204ENST00000479344 ERICH3Q5RHP9 1530 aa36.98■■■■□ 3.51
USP21-204ENST00000479344 FHAD1B1AJZ9 1412 aa36.95■■■■□ 3.51
USP21-204ENST00000479344 CEP170Q5SW79 1584 aa36.95■■■■□ 3.51
USP21-204ENST00000479344 NUP160Q12769 1436 aa36.92■■■■□ 3.5
USP21-204ENST00000479344 ERCC6L2Q5T890 1561 aa36.85■■■■□ 3.49
USP21-204ENST00000479344 SHROOM2Q13796 1616 aa36.73■■■■□ 3.47
USP21-204ENST00000479344 IGF1RP08069 1367 aa36.67■■■■□ 3.46
USP21-204ENST00000479344 KIF27Q86VH2 1401 aa36.65■■■■□ 3.46
USP21-204ENST00000479344 TRHP20396 242 aaPredicted RBP36.61■■■■□ 3.45
USP21-204ENST00000479344 RUSC2Q8N2Y8 1516 aa36.56■■■■□ 3.44
USP21-204ENST00000479344 JPH4Q96JJ6 628 aa36.52■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms