RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 NISCHQ9Y2I1 1504 aa43.93■■■■■ 4.62
HLA-A-206ENST00000479320 CCDC180Q9P1Z9 1646 aa39.21■■■■□ 3.87
HLA-A-206ENST00000479320 ABCC9O60706 1549 aa38.81■■■■□ 3.8
HLA-A-206ENST00000479320 RB1CC1Q8TDY2 1594 aa37.12■■■■□ 3.53
HLA-A-206ENST00000479320 NACADO15069 1562 aa36.97■■■■□ 3.51
HLA-A-206ENST00000479320 DCAF8L2P0C7V8 631 aa36.93■■■■□ 3.5
HLA-A-206ENST00000479320 MYO15BQ96JP2 1530 aa36.61■■■■□ 3.45
HLA-A-206ENST00000479320 ZCCHC6Q5VYS8 1495 aaKnown RBP36.47■■■■□ 3.43
HLA-A-206ENST00000479320 UNC13AQ9UPW8 1703 aa36.32■■■■□ 3.41
HLA-A-206ENST00000479320 DCAF1Q9Y4B6 1507 aa36.3■■■■□ 3.4
HLA-A-206ENST00000479320 PABPN1Q86U42 306 aaKnown RBP eCLIP36.23■■■■□ 3.39
HLA-A-206ENST00000479320 DNAJC5BQ9UF47 199 aa36.07■■■■□ 3.36
HLA-A-206ENST00000479320 BICRAQ9NZM4 1560 aa36.04■■■■□ 3.36
HLA-A-206ENST00000479320 SCRIBQ14160 1630 aa35.76■■■■□ 3.31
HLA-A-206ENST00000479320 SHROOM4Q9ULL8 1493 aa35.55■■■■□ 3.28
HLA-A-206ENST00000479320 EIF4G1Q04637 1599 aaKnown RBP35.11■■■■□ 3.21
HLA-A-206ENST00000479320 CC2D2AQ9P2K1 1620 aa35.08■■■■□ 3.21
HLA-A-206ENST00000479320 CECR2Q9BXF3 1484 aa34.91■■■■□ 3.18
HLA-A-206ENST00000479320 SMARCA4P51532 1647 aa34.16■■■■□ 3.06
HLA-A-206ENST00000479320 NCAPD3P42695 1498 aa34.14■■■■□ 3.06
HLA-A-206ENST00000479320 ATAD2BQ9ULI0 1458 aa34.1■■■■□ 3.05
HLA-A-206ENST00000479320 BAZ1AQ9NRL2 1556 aaPredicted RBP34.06■■■■□ 3.04
HLA-A-206ENST00000479320 SMARCA2P51531 1590 aa34■■■■□ 3.03
HLA-A-206ENST00000479320 HMGXB3Q12766 1538 aa33.9■■■■□ 3.02
HLA-A-206ENST00000479320 MROH2BQ7Z745 1585 aa33.85■■■■□ 3.01
HLA-A-206ENST00000479320 PEG3Q9GZU2 1588 aa33.83■■■■□ 3.01
HLA-A-206ENST00000479320 BAZ1BQ9UIG0 1483 aaKnown RBP33.77■■■■□ 3
HLA-A-206ENST00000479320 WIZO95785 1651 aa33.48■■■□□ 2.95
HLA-A-206ENST00000479320 NESP48681 1621 aa33.47■■■□□ 2.95
HLA-A-206ENST00000479320 ERCC6Q03468 1493 aa33.45■■■□□ 2.95
HLA-A-206ENST00000479320 RSF1Q96T23 1441 aaPredicted RBP33.32■■■□□ 2.92
HLA-A-206ENST00000479320 LAMC3Q9Y6N6 1575 aa33.29■■■□□ 2.92
HLA-A-206ENST00000479320 CUX2O14529 1486 aa33.25■■■□□ 2.91
HLA-A-206ENST00000479320 CADPSQ9ULU8 1353 aa33.13■■■□□ 2.89
HLA-A-206ENST00000479320 PDS5BQ9NTI5 1447 aa33.09■■■□□ 2.89
HLA-A-206ENST00000479320 TOP2AP11388 1531 aaKnown RBP33.06■■■□□ 2.88
HLA-A-206ENST00000479320 KIF21AQ7Z4S6 1674 aa33.05■■■□□ 2.88
HLA-A-206ENST00000479320 THOC2Q8NI27 1593 aaKnown RBP33.02■■■□□ 2.88
HLA-A-206ENST00000479320 CFTRP13569 1480 aa32.83■■■□□ 2.85
HLA-A-206ENST00000479320 DNAJC5Q9H3Z4 198 aa32.78■■■□□ 2.84
HLA-A-206ENST00000479320 MRC2Q9UBG0 1479 aa32.76■■■□□ 2.84
HLA-A-206ENST00000479320 FANCD2Q9BXW9 1451 aa32.74■■■□□ 2.83
HLA-A-206ENST00000479320 CEP164Q9UPV0 1460 aa32.72■■■□□ 2.83
HLA-A-206ENST00000479320 CCDC88BA6NC98 1476 aa32.71■■■□□ 2.83
HLA-A-206ENST00000479320 WDR62O43379 1518 aa32.66■■■□□ 2.82
HLA-A-206ENST00000479320 PRDM2Q13029 1718 aa32.55■■■□□ 2.8
HLA-A-206ENST00000479320 URB2Q14146 1524 aaKnown RBP32.45■■■□□ 2.78
HLA-A-206ENST00000479320 SUPT5HO00267 1087 aaKnown RBP32.19■■■□□ 2.74
HLA-A-206ENST00000479320 TOPBP1Q92547 1522 aa32.17■■■□□ 2.74
HLA-A-206ENST00000479320 ABCC8Q09428 1581 aa32.13■■■□□ 2.73
HLA-A-206ENST00000479320 DNMBPQ6XZF7 1577 aa32.08■■■□□ 2.73
HLA-A-206ENST00000479320 IFT140Q96RY7 1462 aa32.06■■■□□ 2.72
HLA-A-206ENST00000479320 ZNF608Q9ULD9 1512 aaPredicted RBP31.98■■■□□ 2.71
HLA-A-206ENST00000479320 POLA1P09884 1462 aaPredicted RBP31.87■■■□□ 2.69
HLA-A-206ENST00000479320 TARBP1Q13395 1621 aaKnown RBP31.86■■■□□ 2.69
HLA-A-206ENST00000479320 OSCARQ8IYS5 282 aa31.85■■■□□ 2.69
HLA-A-206ENST00000479320 EIF4G3O43432 1585 aaKnown RBP31.81■■■□□ 2.68
HLA-A-206ENST00000479320 CUX1P39880 1505 aa31.78■■■□□ 2.68
HLA-A-206ENST00000479320 AQRO60306 1485 aaKnown RBP eCLIP31.76■■■□□ 2.67
HLA-A-206ENST00000479320 RAD54L2Q9Y4B4 1467 aa31.76■■■□□ 2.67
HLA-A-206ENST00000479320 SOGA1O94964 1423 aa31.75■■■□□ 2.67
HLA-A-206ENST00000479320 FGD5Q6ZNL6 1462 aa31.73■■■□□ 2.67
HLA-A-206ENST00000479320 TDRD9Q8NDG6 1382 aaKnown RBP31.63■■■□□ 2.65
HLA-A-206ENST00000479320 WDR97A6NE52 1622 aa31.54■■■□□ 2.64
HLA-A-206ENST00000479320 TRIM41Q8WV44 630 aa31.51■■■□□ 2.64
HLA-A-206ENST00000479320 CHD1O14646 1710 aa31.51■■■□□ 2.63
HLA-A-206ENST00000479320 FBLN2P98095 1184 aa31.47■■■□□ 2.63
HLA-A-206ENST00000479320 SNAPC4Q5SXM2 1469 aa31.42■■■□□ 2.62
HLA-A-206ENST00000479320 WRNQ14191 1432 aaPredicted RBP eCLIP31.41■■■□□ 2.62
HLA-A-206ENST00000479320 GRIN2BQ13224 1484 aa31.4■■■□□ 2.62
HLA-A-206ENST00000479320 ABCA10Q8WWZ4 1543 aa31.39■■■□□ 2.62
HLA-A-206ENST00000479320 TOP2BQ02880 1626 aa31.39■■■□□ 2.61
HLA-A-206ENST00000479320 BIVM-ERCC5R4GMW8 1640 aa31.39■■■□□ 2.61
HLA-A-206ENST00000479320 RIMBP3CA6NJZ7 1639 aa31.36■■■□□ 2.61
HLA-A-206ENST00000479320 RIMBP3BA6NNM3 1639 aa31.36■■■□□ 2.61
HLA-A-206ENST00000479320 RIMBP3Q9UFD9 1639 aa31.36■■■□□ 2.61
HLA-A-206ENST00000479320 SYNJ1O43426 1573 aa31.36■■■□□ 2.61
HLA-A-206ENST00000479320 GAPVD1Q14C86 1478 aa31.36■■■□□ 2.61
HLA-A-206ENST00000479320 MAGI1Q96QZ7 1491 aaPredicted RBP31.35■■■□□ 2.61
HLA-A-206ENST00000479320 PBRM1Q86U86 1689 aa31.31■■■□□ 2.6
HLA-A-206ENST00000479320 ARHGEF11O15085 1522 aa31.3■■■□□ 2.6
HLA-A-206ENST00000479320 ABCA5Q8WWZ7 1642 aa31.3■■■□□ 2.6
HLA-A-206ENST00000479320 CHMP7Q8WUX9 453 aaPredicted RBP31.3■■■□□ 2.6
HLA-A-206ENST00000479320 SYNJ2O15056 1496 aa31.25■■■□□ 2.59
HLA-A-206ENST00000479320 CLASP1Q7Z460 1538 aa31.14■■■□□ 2.58
HLA-A-206ENST00000479320 CYB5RLQ6IPT4 315 aa31.08■■■□□ 2.57
HLA-A-206ENST00000479320 ADAMTS12P58397 1594 aa31.03■■■□□ 2.56
HLA-A-206ENST00000479320 ARAP1Q96P48 1450 aa31.02■■■□□ 2.56
HLA-A-206ENST00000479320 ERICH3Q5RHP9 1530 aa31.01■■■□□ 2.55
HLA-A-206ENST00000479320 GRIN2AQ12879 1464 aa31■■■□□ 2.55
HLA-A-206ENST00000479320 FHAD1B1AJZ9 1412 aa30.97■■■□□ 2.55
HLA-A-206ENST00000479320 CEP170Q5SW79 1584 aa30.88■■■□□ 2.53
HLA-A-206ENST00000479320 NUP160Q12769 1436 aa30.87■■■□□ 2.53
HLA-A-206ENST00000479320 KIF27Q86VH2 1401 aa30.78■■■□□ 2.52
HLA-A-206ENST00000479320 IGF1RP08069 1367 aa30.75■■■□□ 2.51
HLA-A-206ENST00000479320 ERCC6L2Q5T890 1561 aa30.72■■■□□ 2.51
HLA-A-206ENST00000479320 SHROOM2Q13796 1616 aa30.7■■■□□ 2.5
HLA-A-206ENST00000479320 CUL7Q14999 1698 aa30.64■■■□□ 2.5
HLA-A-206ENST00000479320 JPH4Q96JJ6 628 aa30.6■■■□□ 2.49
HLA-A-206ENST00000479320 TRHP20396 242 aaPredicted RBP30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms