RNA–Protein interactions for RNA: ENST00000479193.1

ATP11A-211, Transcript of ATPase phospholipid transporting 11A, humanhuman

TSL 2

Gene ATP11A, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11A-211ENST00000479193 NISCHQ9Y2I1 1504 aa37.24■■■■□ 3.55
ATP11A-211ENST00000479193 CCDC180Q9P1Z9 1646 aa33.48■■■□□ 2.95
ATP11A-211ENST00000479193 ABCC9O60706 1549 aa33.29■■■□□ 2.92
ATP11A-211ENST00000479193 RB1CC1Q8TDY2 1594 aa31.85■■■□□ 2.69
ATP11A-211ENST00000479193 NACADO15069 1562 aa31.66■■■□□ 2.66
ATP11A-211ENST00000479193 DCAF8L2P0C7V8 631 aa31.33■■■□□ 2.61
ATP11A-211ENST00000479193 MYO15BQ96JP2 1530 aa31.29■■■□□ 2.6
ATP11A-211ENST00000479193 DNAJC5BQ9UF47 199 aa31.13■■■□□ 2.57
ATP11A-211ENST00000479193 UNC13AQ9UPW8 1703 aa31■■■□□ 2.55
ATP11A-211ENST00000479193 PABPN1Q86U42 306 aaKnown RBP eCLIP30.96■■■□□ 2.55
ATP11A-211ENST00000479193 DCAF1Q9Y4B6 1507 aa30.87■■■□□ 2.53
ATP11A-211ENST00000479193 ZCCHC6Q5VYS8 1495 aaKnown RBP30.86■■■□□ 2.53
ATP11A-211ENST00000479193 BICRAQ9NZM4 1560 aa30.79■■■□□ 2.52
ATP11A-211ENST00000479193 SHROOM4Q9ULL8 1493 aa30.62■■■□□ 2.49
ATP11A-211ENST00000479193 SCRIBQ14160 1630 aa30.35■■■□□ 2.45
ATP11A-211ENST00000479193 CC2D2AQ9P2K1 1620 aa30.12■■■□□ 2.41
ATP11A-211ENST00000479193 EIF4G1Q04637 1599 aaKnown RBP30.09■■■□□ 2.41
ATP11A-211ENST00000479193 CECR2Q9BXF3 1484 aa30.06■■■□□ 2.4
ATP11A-211ENST00000479193 NCAPD3P42695 1498 aa29.2■■■□□ 2.26
ATP11A-211ENST00000479193 SMARCA2P51531 1590 aa29.05■■■□□ 2.24
ATP11A-211ENST00000479193 ATAD2BQ9ULI0 1458 aa29.05■■■□□ 2.24
ATP11A-211ENST00000479193 SMARCA4P51532 1647 aa29.03■■■□□ 2.24
ATP11A-211ENST00000479193 HMGXB3Q12766 1538 aa28.99■■■□□ 2.23
ATP11A-211ENST00000479193 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
ATP11A-211ENST00000479193 CUX2O14529 1486 aa28.84■■■□□ 2.21
ATP11A-211ENST00000479193 ERCC6Q03468 1493 aa28.84■■■□□ 2.21
ATP11A-211ENST00000479193 PEG3Q9GZU2 1588 aa28.82■■■□□ 2.2
ATP11A-211ENST00000479193 BAZ1BQ9UIG0 1483 aaKnown RBP28.8■■■□□ 2.2
ATP11A-211ENST00000479193 DNAJC5Q9H3Z4 198 aa28.73■■■□□ 2.19
ATP11A-211ENST00000479193 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
ATP11A-211ENST00000479193 NESP48681 1621 aa28.57■■■□□ 2.16
ATP11A-211ENST00000479193 LAMC3Q9Y6N6 1575 aa28.55■■■□□ 2.16
ATP11A-211ENST00000479193 PDS5BQ9NTI5 1447 aa28.4■■■□□ 2.14
ATP11A-211ENST00000479193 THOC2Q8NI27 1593 aaKnown RBP28.36■■■□□ 2.13
ATP11A-211ENST00000479193 CADPSQ9ULU8 1353 aa28.29■■■□□ 2.12
ATP11A-211ENST00000479193 WIZO95785 1651 aa28.26■■■□□ 2.12
ATP11A-211ENST00000479193 KIF21AQ7Z4S6 1674 aa28.26■■■□□ 2.11
ATP11A-211ENST00000479193 MRC2Q9UBG0 1479 aa28.09■■■□□ 2.09
ATP11A-211ENST00000479193 RSF1Q96T23 1441 aaPredicted RBP28.07■■■□□ 2.08
ATP11A-211ENST00000479193 WDR62O43379 1518 aa28.02■■■□□ 2.08
ATP11A-211ENST00000479193 TOP2AP11388 1531 aaKnown RBP28■■■□□ 2.07
ATP11A-211ENST00000479193 CEP164Q9UPV0 1460 aa28■■■□□ 2.07
ATP11A-211ENST00000479193 CFTRP13569 1480 aa27.97■■■□□ 2.07
ATP11A-211ENST00000479193 FANCD2Q9BXW9 1451 aa27.94■■■□□ 2.06
ATP11A-211ENST00000479193 PRDM2Q13029 1718 aa27.72■■■□□ 2.03
ATP11A-211ENST00000479193 URB2Q14146 1524 aaKnown RBP27.66■■■□□ 2.02
ATP11A-211ENST00000479193 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.01
ATP11A-211ENST00000479193 OSCARQ8IYS5 282 aa27.5■■□□□ 1.99
ATP11A-211ENST00000479193 ABCC8Q09428 1581 aa27.5■■□□□ 1.99
ATP11A-211ENST00000479193 IFT140Q96RY7 1462 aa27.46■■□□□ 1.99
ATP11A-211ENST00000479193 TOPBP1Q92547 1522 aa27.41■■□□□ 1.98
ATP11A-211ENST00000479193 TRIM41Q8WV44 630 aa27.38■■□□□ 1.97
ATP11A-211ENST00000479193 DNMBPQ6XZF7 1577 aa27.34■■□□□ 1.97
ATP11A-211ENST00000479193 ZNF608Q9ULD9 1512 aaPredicted RBP27.28■■□□□ 1.96
ATP11A-211ENST00000479193 EIF4G3O43432 1585 aaKnown RBP27.19■■□□□ 1.94
ATP11A-211ENST00000479193 TARBP1Q13395 1621 aaKnown RBP27.16■■□□□ 1.94
ATP11A-211ENST00000479193 POLA1P09884 1462 aaPredicted RBP27.12■■□□□ 1.93
ATP11A-211ENST00000479193 AQRO60306 1485 aaKnown RBP eCLIP27.06■■□□□ 1.92
ATP11A-211ENST00000479193 RIMBP3CA6NJZ7 1639 aa27.05■■□□□ 1.92
ATP11A-211ENST00000479193 RIMBP3BA6NNM3 1639 aa27.05■■□□□ 1.92
ATP11A-211ENST00000479193 RIMBP3Q9UFD9 1639 aa27.05■■□□□ 1.92
ATP11A-211ENST00000479193 WDR97A6NE52 1622 aa27.04■■□□□ 1.92
ATP11A-211ENST00000479193 SOGA1O94964 1423 aa27.02■■□□□ 1.92
ATP11A-211ENST00000479193 ARHGEF11O15085 1522 aa26.99■■□□□ 1.91
ATP11A-211ENST00000479193 CHD1O14646 1710 aa26.96■■□□□ 1.91
ATP11A-211ENST00000479193 RAD54L2Q9Y4B4 1467 aa26.95■■□□□ 1.91
ATP11A-211ENST00000479193 FGD5Q6ZNL6 1462 aa26.94■■□□□ 1.9
ATP11A-211ENST00000479193 TDRD9Q8NDG6 1382 aaKnown RBP26.9■■□□□ 1.9
ATP11A-211ENST00000479193 FBLN2P98095 1184 aa26.9■■□□□ 1.9
ATP11A-211ENST00000479193 CUX1P39880 1505 aa26.9■■□□□ 1.9
ATP11A-211ENST00000479193 MAGI1Q96QZ7 1491 aaPredicted RBP26.84■■□□□ 1.89
ATP11A-211ENST00000479193 GRIN2BQ13224 1484 aa26.81■■□□□ 1.88
ATP11A-211ENST00000479193 SNAPC4Q5SXM2 1469 aa26.81■■□□□ 1.88
ATP11A-211ENST00000479193 SUPT5HO00267 1087 aaKnown RBP26.78■■□□□ 1.88
ATP11A-211ENST00000479193 CHMP7Q8WUX9 453 aaPredicted RBP26.78■■□□□ 1.88
ATP11A-211ENST00000479193 CYB5RLQ6IPT4 315 aa26.77■■□□□ 1.88
ATP11A-211ENST00000479193 SYNJ1O43426 1573 aa26.74■■□□□ 1.87
ATP11A-211ENST00000479193 SYNJ2O15056 1496 aa26.73■■□□□ 1.87
ATP11A-211ENST00000479193 GAPVD1Q14C86 1478 aa26.7■■□□□ 1.87
ATP11A-211ENST00000479193 ABCA10Q8WWZ4 1543 aa26.7■■□□□ 1.86
ATP11A-211ENST00000479193 ARAP1Q96P48 1450 aa26.69■■□□□ 1.86
ATP11A-211ENST00000479193 CLASP1Q7Z460 1538 aa26.69■■□□□ 1.86
ATP11A-211ENST00000479193 PBRM1Q86U86 1689 aa26.66■■□□□ 1.86
ATP11A-211ENST00000479193 ABCA5Q8WWZ7 1642 aa26.62■■□□□ 1.85
ATP11A-211ENST00000479193 WRNQ14191 1432 aaPredicted RBP eCLIP26.62■■□□□ 1.85
ATP11A-211ENST00000479193 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
ATP11A-211ENST00000479193 BIVM-ERCC5R4GMW8 1640 aa26.54■■□□□ 1.84
ATP11A-211ENST00000479193 TRHP20396 242 aaPredicted RBP26.49■■□□□ 1.83
ATP11A-211ENST00000479193 GRIN2AQ12879 1464 aa26.44■■□□□ 1.82
ATP11A-211ENST00000479193 ADAMTS12P58397 1594 aa26.41■■□□□ 1.82
ATP11A-211ENST00000479193 FHAD1B1AJZ9 1412 aa26.39■■□□□ 1.82
ATP11A-211ENST00000479193 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.82
ATP11A-211ENST00000479193 NUP160Q12769 1436 aa26.36■■□□□ 1.81
ATP11A-211ENST00000479193 CEP170Q5SW79 1584 aa26.29■■□□□ 1.8
ATP11A-211ENST00000479193 SHROOM2Q13796 1616 aa26.24■■□□□ 1.79
ATP11A-211ENST00000479193 ERCC6L2Q5T890 1561 aa26.16■■□□□ 1.78
ATP11A-211ENST00000479193 JPH4Q96JJ6 628 aa26.09■■□□□ 1.77
ATP11A-211ENST00000479193 PRG4Q92954 1404 aaPredicted RBP26.08■■□□□ 1.77
ATP11A-211ENST00000479193 KIF27Q86VH2 1401 aa26.06■■□□□ 1.76
ATP11A-211ENST00000479193 RUSC2Q8N2Y8 1516 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms