RNA–Protein interactions for RNA: ENST00000479029.1

PHF1-207, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-207ENST00000479029 NISCHQ9Y2I1 1504 aa41.23■■■■■ 4.19
PHF1-207ENST00000479029 CCDC180Q9P1Z9 1646 aa36.83■■■■□ 3.49
PHF1-207ENST00000479029 ABCC9O60706 1549 aa36.75■■■■□ 3.47
PHF1-207ENST00000479029 RB1CC1Q8TDY2 1594 aa35.04■■■■□ 3.2
PHF1-207ENST00000479029 DCAF8L2P0C7V8 631 aa34.87■■■■□ 3.17
PHF1-207ENST00000479029 NACADO15069 1562 aa34.86■■■■□ 3.17
PHF1-207ENST00000479029 MYO15BQ96JP2 1530 aa34.44■■■■□ 3.1
PHF1-207ENST00000479029 DNAJC5BQ9UF47 199 aa34.35■■■■□ 3.09
PHF1-207ENST00000479029 PABPN1Q86U42 306 aaKnown RBP eCLIP34.31■■■■□ 3.081e-8■■■□□ 15.7
PHF1-207ENST00000479029 ZCCHC6Q5VYS8 1495 aaKnown RBP34.18■■■■□ 3.06
PHF1-207ENST00000479029 UNC13AQ9UPW8 1703 aa34.1■■■■□ 3.05
PHF1-207ENST00000479029 DCAF1Q9Y4B6 1507 aa34.06■■■■□ 3.04
PHF1-207ENST00000479029 BICRAQ9NZM4 1560 aa33.96■■■■□ 3.03
PHF1-207ENST00000479029 SCRIBQ14160 1630 aa33.61■■■□□ 2.97
PHF1-207ENST00000479029 SHROOM4Q9ULL8 1493 aa33.59■■■□□ 2.97
PHF1-207ENST00000479029 CC2D2AQ9P2K1 1620 aa33.16■■■□□ 2.9
PHF1-207ENST00000479029 EIF4G1Q04637 1599 aaKnown RBP33.15■■■□□ 2.9
PHF1-207ENST00000479029 CECR2Q9BXF3 1484 aa33.11■■■□□ 2.89
PHF1-207ENST00000479029 NCAPD3P42695 1498 aa32.22■■■□□ 2.75
PHF1-207ENST00000479029 ATAD2BQ9ULI0 1458 aa32.12■■■□□ 2.73
PHF1-207ENST00000479029 SMARCA4P51532 1647 aa32.08■■■□□ 2.73
PHF1-207ENST00000479029 SMARCA2P51531 1590 aa32.03■■■□□ 2.72
PHF1-207ENST00000479029 BAZ1AQ9NRL2 1556 aaPredicted RBP31.98■■■□□ 2.71
PHF1-207ENST00000479029 HMGXB3Q12766 1538 aa31.93■■■□□ 2.7
PHF1-207ENST00000479029 BAZ1BQ9UIG0 1483 aaKnown RBP31.83■■■□□ 2.69
PHF1-207ENST00000479029 PEG3Q9GZU2 1588 aa31.77■■■□□ 2.68
PHF1-207ENST00000479029 ERCC6Q03468 1493 aa31.75■■■□□ 2.67
PHF1-207ENST00000479029 MROH2BQ7Z745 1585 aa31.75■■■□□ 2.67
PHF1-207ENST00000479029 CUX2O14529 1486 aa31.6■■■□□ 2.65
PHF1-207ENST00000479029 NESP48681 1621 aa31.6■■■□□ 2.65
PHF1-207ENST00000479029 DNAJC5Q9H3Z4 198 aa31.45■■■□□ 2.63
PHF1-207ENST00000479029 LAMC3Q9Y6N6 1575 aa31.4■■■□□ 2.62
PHF1-207ENST00000479029 WIZO95785 1651 aa31.34■■■□□ 2.61
PHF1-207ENST00000479029 PDS5BQ9NTI5 1447 aa31.3■■■□□ 2.6
PHF1-207ENST00000479029 CADPSQ9ULU8 1353 aa31.27■■■□□ 2.6
PHF1-207ENST00000479029 RSF1Q96T23 1441 aaPredicted RBP31.21■■■□□ 2.59
PHF1-207ENST00000479029 THOC2Q8NI27 1593 aaKnown RBP31.17■■■□□ 2.58
PHF1-207ENST00000479029 KIF21AQ7Z4S6 1674 aa31.12■■■□□ 2.57
PHF1-207ENST00000479029 TOP2AP11388 1531 aaKnown RBP30.98■■■□□ 2.55
PHF1-207ENST00000479029 MRC2Q9UBG0 1479 aa30.96■■■□□ 2.55
PHF1-207ENST00000479029 CFTRP13569 1480 aa30.92■■■□□ 2.54
PHF1-207ENST00000479029 CEP164Q9UPV0 1460 aa30.89■■■□□ 2.53
PHF1-207ENST00000479029 FANCD2Q9BXW9 1451 aa30.88■■■□□ 2.53
PHF1-207ENST00000479029 WDR62O43379 1518 aa30.85■■■□□ 2.53
PHF1-207ENST00000479029 CCDC88BA6NC98 1476 aa30.68■■■□□ 2.5
PHF1-207ENST00000479029 URB2Q14146 1524 aaKnown RBP30.57■■■□□ 2.49
PHF1-207ENST00000479029 PRDM2Q13029 1718 aa30.46■■■□□ 2.47
PHF1-207ENST00000479029 OSCARQ8IYS5 282 aa30.3■■■□□ 2.44
PHF1-207ENST00000479029 TOPBP1Q92547 1522 aa30.29■■■□□ 2.44
PHF1-207ENST00000479029 ABCC8Q09428 1581 aa30.28■■■□□ 2.44
PHF1-207ENST00000479029 IFT140Q96RY7 1462 aa30.28■■■□□ 2.44
PHF1-207ENST00000479029 ZNF608Q9ULD9 1512 aaPredicted RBP30.18■■■□□ 2.42
PHF1-207ENST00000479029 DNMBPQ6XZF7 1577 aa30.17■■■□□ 2.42
PHF1-207ENST00000479029 TRIM41Q8WV44 630 aa30.15■■■□□ 2.42
PHF1-207ENST00000479029 SUPT5HO00267 1087 aaKnown RBP30.05■■■□□ 2.4
PHF1-207ENST00000479029 POLA1P09884 1462 aaPredicted RBP29.99■■■□□ 2.39
PHF1-207ENST00000479029 AQRO60306 1485 aaKnown RBP eCLIP29.97■■■□□ 2.396e-7■■□□□ 11.9
PHF1-207ENST00000479029 TARBP1Q13395 1621 aaKnown RBP29.96■■■□□ 2.39
PHF1-207ENST00000479029 EIF4G3O43432 1585 aaKnown RBP29.96■■■□□ 2.39
PHF1-207ENST00000479029 SOGA1O94964 1423 aa29.92■■■□□ 2.38
PHF1-207ENST00000479029 RAD54L2Q9Y4B4 1467 aa29.89■■■□□ 2.38
PHF1-207ENST00000479029 TDRD9Q8NDG6 1382 aaKnown RBP29.84■■■□□ 2.37
PHF1-207ENST00000479029 FGD5Q6ZNL6 1462 aa29.83■■■□□ 2.37
PHF1-207ENST00000479029 FBLN2P98095 1184 aa29.82■■■□□ 2.36
PHF1-207ENST00000479029 CUX1P39880 1505 aa29.81■■■□□ 2.36
PHF1-207ENST00000479029 RIMBP3CA6NJZ7 1639 aa29.71■■■□□ 2.35
PHF1-207ENST00000479029 RIMBP3BA6NNM3 1639 aa29.71■■■□□ 2.35
PHF1-207ENST00000479029 RIMBP3Q9UFD9 1639 aa29.71■■■□□ 2.35
PHF1-207ENST00000479029 ARHGEF11O15085 1522 aa29.69■■■□□ 2.34
PHF1-207ENST00000479029 WDR97A6NE52 1622 aa29.68■■■□□ 2.34
PHF1-207ENST00000479029 CHD1O14646 1710 aa29.67■■■□□ 2.34
PHF1-207ENST00000479029 SNAPC4Q5SXM2 1469 aa29.63■■■□□ 2.33
PHF1-207ENST00000479029 CHMP7Q8WUX9 453 aaPredicted RBP29.63■■■□□ 2.33
PHF1-207ENST00000479029 GRIN2BQ13224 1484 aa29.61■■■□□ 2.33
PHF1-207ENST00000479029 MAGI1Q96QZ7 1491 aaPredicted RBP29.58■■■□□ 2.33
PHF1-207ENST00000479029 CYB5RLQ6IPT4 315 aa29.57■■■□□ 2.32
PHF1-207ENST00000479029 GAPVD1Q14C86 1478 aa29.54■■■□□ 2.32
PHF1-207ENST00000479029 ABCA10Q8WWZ4 1543 aa29.51■■■□□ 2.32
PHF1-207ENST00000479029 WRNQ14191 1432 aaPredicted RBP eCLIP29.49■■■□□ 2.31
PHF1-207ENST00000479029 SYNJ2O15056 1496 aa29.48■■■□□ 2.31
PHF1-207ENST00000479029 SYNJ1O43426 1573 aa29.42■■■□□ 2.3
PHF1-207ENST00000479029 ARAP1Q96P48 1450 aa29.4■■■□□ 2.3
PHF1-207ENST00000479029 CLASP1Q7Z460 1538 aa29.39■■■□□ 2.3
PHF1-207ENST00000479029 TOP2BQ02880 1626 aa29.38■■■□□ 2.29
PHF1-207ENST00000479029 ABCA5Q8WWZ7 1642 aa29.38■■■□□ 2.29
PHF1-207ENST00000479029 PBRM1Q86U86 1689 aa29.37■■■□□ 2.29
PHF1-207ENST00000479029 BIVM-ERCC5R4GMW8 1640 aa29.34■■■□□ 2.29
PHF1-207ENST00000479029 GRIN2AQ12879 1464 aa29.21■■■□□ 2.27
PHF1-207ENST00000479029 TRHP20396 242 aaPredicted RBP29.19■■■□□ 2.26
PHF1-207ENST00000479029 FHAD1B1AJZ9 1412 aa29.18■■■□□ 2.26
PHF1-207ENST00000479029 ADAMTS12P58397 1594 aa29.16■■■□□ 2.26
PHF1-207ENST00000479029 ERICH3Q5RHP9 1530 aa29.15■■■□□ 2.26
PHF1-207ENST00000479029 NUP160Q12769 1436 aa29.11■■■□□ 2.25
PHF1-207ENST00000479029 CEP170Q5SW79 1584 aa29.05■■■□□ 2.24
PHF1-207ENST00000479029 ERCC6L2Q5T890 1561 aa28.94■■■□□ 2.22
PHF1-207ENST00000479029 KIF27Q86VH2 1401 aa28.9■■■□□ 2.22
PHF1-207ENST00000479029 JPH4Q96JJ6 628 aa28.9■■■□□ 2.22
PHF1-207ENST00000479029 SHROOM2Q13796 1616 aa28.9■■■□□ 2.22
PHF1-207ENST00000479029 IGF1RP08069 1367 aa28.88■■■□□ 2.21
PHF1-207ENST00000479029 PRG4Q92954 1404 aaPredicted RBP28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 283.5 ms