RNA–Protein interactions for RNA: ENST00000478788.1

AC005996.1-201, humanhuman

BASIC

Gene AC005996.1, Length 1,586 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005996.1-201ENST00000478788 AEBP2Q6ZN18 517 aaPredicted RBP24.44■■□□□ 1.5
AC005996.1-201ENST00000478788 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
AC005996.1-201ENST00000478788 PHF23Q9BUL5 403 aaPredicted RBP20.78■□□□□ 0.92
AC005996.1-201ENST00000478788 SENP3Q9H4L4 574 aaPredicted RBP20.77■□□□□ 0.92
AC005996.1-201ENST00000478788 NISCHQ9Y2I1 1504 aa19.58■□□□□ 0.73
AC005996.1-201ENST00000478788 FOXD1Q16676 465 aa19.31■□□□□ 0.68
AC005996.1-201ENST00000478788 PLPPR3Q6T4P5 718 aa19.09■□□□□ 0.65
AC005996.1-201ENST00000478788 PPP6R1Q9UPN7 881 aa18.4■□□□□ 0.54
AC005996.1-201ENST00000478788 ADRA2BP18089 450 aa18.37■□□□□ 0.53
AC005996.1-201ENST00000478788 PIAS4Q8N2W9 510 aaPredicted RBP18.13■□□□□ 0.49
AC005996.1-201ENST00000478788 MSH5O43196 834 aa17.9■□□□□ 0.46
AC005996.1-201ENST00000478788 HRCP23327 699 aa16.95■□□□□ 0.3
AC005996.1-201ENST00000478788 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
AC005996.1-201ENST00000478788 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
AC005996.1-201ENST00000478788 MAPK8IP2Q13387 824 aaPredicted RBP16.73■□□□□ 0.27
AC005996.1-201ENST00000478788 ZCCHC6Q5VYS8 1495 aaKnown RBP16.7■□□□□ 0.26
AC005996.1-201ENST00000478788 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
AC005996.1-201ENST00000478788 PELP1Q8IZL8 1130 aaKnown RBP16.64■□□□□ 0.25
AC005996.1-201ENST00000478788 CCDC180Q9P1Z9 1646 aa16.62■□□□□ 0.25
AC005996.1-201ENST00000478788 DCAF1Q9Y4B6 1507 aa16.61■□□□□ 0.25
AC005996.1-201ENST00000478788 DMRT2Q9Y5R5 561 aa16.55■□□□□ 0.24
AC005996.1-201ENST00000478788 SHROOM4Q9ULL8 1493 aa16.52■□□□□ 0.24
AC005996.1-201ENST00000478788 SUPT5HO00267 1087 aaKnown RBP16.51■□□□□ 0.23
AC005996.1-201ENST00000478788 MYO15BQ96JP2 1530 aa16.45■□□□□ 0.22
AC005996.1-201ENST00000478788 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
AC005996.1-201ENST00000478788 PCGF6Q9BYE7 350 aa16.35■□□□□ 0.21
AC005996.1-201ENST00000478788 ZEB1P37275 1124 aaPredicted RBP16.33■□□□□ 0.2
AC005996.1-201ENST00000478788 NCBP3Q53F19 620 aaKnown RBP16.29■□□□□ 0.2
AC005996.1-201ENST00000478788 TRIM26Q12899 539 aaPredicted RBP16.22■□□□□ 0.19
AC005996.1-201ENST00000478788 MYT1Q01538 1121 aa16.16■□□□□ 0.18
AC005996.1-201ENST00000478788 KCNA4P22459 653 aa16.14■□□□□ 0.17
AC005996.1-201ENST00000478788 HOXD11P31277 338 aaPredicted RBP16.13■□□□□ 0.17
AC005996.1-201ENST00000478788 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
AC005996.1-201ENST00000478788 PPARGC1BQ86YN6 1023 aaKnown RBP16.08■□□□□ 0.16
AC005996.1-201ENST00000478788 NPM3O75607 178 aaKnown RBP16.05■□□□□ 0.16
AC005996.1-201ENST00000478788 ABCC9O60706 1549 aa15.86■□□□□ 0.13
AC005996.1-201ENST00000478788 DCAF8L1A6NGE4 600 aa15.8■□□□□ 0.12
AC005996.1-201ENST00000478788 LOC105371045A0A1W2PR82 267 aa15.79■□□□□ 0.12
AC005996.1-201ENST00000478788 DNAJC5BQ9UF47 199 aa15.66■□□□□ 0.1
AC005996.1-201ENST00000478788 RB1CC1Q8TDY2 1594 aa15.65■□□□□ 0.1
AC005996.1-201ENST00000478788 ACIN1Q9UKV3 1341 aaKnown RBP15.61■□□□□ 0.09
AC005996.1-201ENST00000478788 RSF1Q96T23 1441 aaPredicted RBP15.59■□□□□ 0.09
AC005996.1-201ENST00000478788 CENPBP07199 599 aaPredicted RBP15.59■□□□□ 0.09
AC005996.1-201ENST00000478788 DCAF8L2P0C7V8 631 aa15.56■□□□□ 0.08
AC005996.1-201ENST00000478788 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
AC005996.1-201ENST00000478788 WRNQ14191 1432 aaPredicted RBP eCLIP15.41■□□□□ 0.06
AC005996.1-201ENST00000478788 NEUROD1Q13562 356 aa15.36■□□□□ 0.05
AC005996.1-201ENST00000478788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
AC005996.1-201ENST00000478788 DIEXFQ68CQ4 756 aaKnown RBP15.33■□□□□ 0.05
AC005996.1-201ENST00000478788 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
AC005996.1-201ENST00000478788 RNF39Q9H2S5 420 aa15.32■□□□□ 0.04
AC005996.1-201ENST00000478788 CCER1Q8TC90 406 aaPredicted RBP15.31■□□□□ 0.04
AC005996.1-201ENST00000478788 CLSPNQ9HAW4 1339 aa15.31■□□□□ 0.04
AC005996.1-201ENST00000478788 GTF3C3Q9Y5Q9 886 aa15.29■□□□□ 0.04
AC005996.1-201ENST00000478788 SCRIBQ14160 1630 aa15.26■□□□□ 0.03
AC005996.1-201ENST00000478788 EIF4G1Q04637 1599 aaKnown RBP15.22■□□□□ 0.03
AC005996.1-201ENST00000478788 SLC4A2P04920 1241 aa15.22■□□□□ 0.03
AC005996.1-201ENST00000478788 EEA1Q15075 1411 aa15.22■□□□□ 0.03
AC005996.1-201ENST00000478788 NACADO15069 1562 aa15.22■□□□□ 0.03
AC005996.1-201ENST00000478788 TTBK1Q5TCY1 1321 aaPredicted RBP15.21■□□□□ 0.03
AC005996.1-201ENST00000478788 BAZ1AQ9NRL2 1556 aaPredicted RBP15.2■□□□□ 0.02
AC005996.1-201ENST00000478788 ZNF316A6NFI3 1004 aaPredicted RBP15.17■□□□□ 0.02
AC005996.1-201ENST00000478788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.15■□□□□ 0.02
AC005996.1-201ENST00000478788 TNIKQ9UKE5 1360 aa15.14■□□□□ 0.01
AC005996.1-201ENST00000478788 FAM9AQ8IZU1 332 aaPredicted RBP15.14■□□□□ 0.01
AC005996.1-201ENST00000478788 C1QBPQ07021 282 aaKnown RBP15.12■□□□□ 0.01
AC005996.1-201ENST00000478788 MROH2BQ7Z745 1585 aa15.09■□□□□ 0.01
AC005996.1-201ENST00000478788 U3KPZ7 1027 aaPredicted RBP15.08■□□□□ 0
AC005996.1-201ENST00000478788 CACNB1Q02641 598 aaPredicted RBP15.07■□□□□ 0
AC005996.1-201ENST00000478788 CEP162Q5TB80 1403 aa15.06■□□□□ 0
AC005996.1-201ENST00000478788 WIZO95785 1651 aa15□□□□□ -0.01
AC005996.1-201ENST00000478788 TOP2AP11388 1531 aaKnown RBP15□□□□□ -0.01
AC005996.1-201ENST00000478788 CECR2Q9BXF3 1484 aa15□□□□□ -0.01
AC005996.1-201ENST00000478788 GOLGA3Q08378 1498 aa14.95□□□□□ -0.02
AC005996.1-201ENST00000478788 FOXD4L1Q9NU39 408 aa14.92□□□□□ -0.02
AC005996.1-201ENST00000478788 KIF21BO75037 1637 aa14.87□□□□□ -0.03
AC005996.1-201ENST00000478788 CCDC88BA6NC98 1476 aa14.86□□□□□ -0.03
AC005996.1-201ENST00000478788 ZBTB22O15209 634 aa14.85□□□□□ -0.03
AC005996.1-201ENST00000478788 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
AC005996.1-201ENST00000478788 BAZ1BQ9UIG0 1483 aaKnown RBP14.85□□□□□ -0.03
AC005996.1-201ENST00000478788 SMARCA2P51531 1590 aa14.84□□□□□ -0.03
AC005996.1-201ENST00000478788 CEP164Q9UPV0 1460 aa14.83□□□□□ -0.03
AC005996.1-201ENST00000478788 MYCNP04198 464 aaPredicted RBP14.83□□□□□ -0.04
AC005996.1-201ENST00000478788 MIER1Q8N108 512 aa14.82□□□□□ -0.04
AC005996.1-201ENST00000478788 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
AC005996.1-201ENST00000478788 SMARCA4P51532 1647 aa14.8□□□□□ -0.04
AC005996.1-201ENST00000478788 EHMT2Q96KQ7 1210 aa14.78□□□□□ -0.04
AC005996.1-201ENST00000478788 VPS8Q8N3P4 1428 aa14.78□□□□□ -0.04
AC005996.1-201ENST00000478788 ABCC8Q09428 1581 aa14.76□□□□□ -0.05
AC005996.1-201ENST00000478788 SOGA1O94964 1423 aa14.75□□□□□ -0.05
AC005996.1-201ENST00000478788 SAMD1Q6SPF0 538 aaPredicted RBP14.75□□□□□ -0.05
AC005996.1-201ENST00000478788 YTHDC1Q96MU7 727 aaKnown RBP14.72□□□□□ -0.05
AC005996.1-201ENST00000478788 SPINK5Q9NQ38 1064 aaPredicted RBP14.72□□□□□ -0.05
AC005996.1-201ENST00000478788 APLP2Q06481 763 aa14.71□□□□□ -0.05
AC005996.1-201ENST00000478788 ANP32EQ9BTT0 268 aa14.7□□□□□ -0.06
AC005996.1-201ENST00000478788 CLIP1P30622 1438 aa14.7□□□□□ -0.06
AC005996.1-201ENST00000478788 UBTFP17480 764 aaKnown RBP14.69□□□□□ -0.06
AC005996.1-201ENST00000478788 SUPT16HQ9Y5B9 1047 aaKnown RBP14.68□□□□□ -0.06
AC005996.1-201ENST00000478788 PEG3Q9GZU2 1588 aa14.67□□□□□ -0.06
AC005996.1-201ENST00000478788 CAPN15O75808 1086 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms