RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 NISCHQ9Y2I1 1504 aa27.17■■□□□ 1.94
SRRT-211ENST00000478693 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
SRRT-211ENST00000478693 ABCC9O60706 1549 aa23.45■■□□□ 1.34
SRRT-211ENST00000478693 DCAF8L2P0C7V8 631 aa22.73■■□□□ 1.23
SRRT-211ENST00000478693 ZCCHC6Q5VYS8 1495 aaKnown RBP22.7■■□□□ 1.22
SRRT-211ENST00000478693 RB1CC1Q8TDY2 1594 aa22.62■■□□□ 1.21
SRRT-211ENST00000478693 NACADO15069 1562 aa22.61■■□□□ 1.21
SRRT-211ENST00000478693 MYO15BQ96JP2 1530 aa22.48■■□□□ 1.19
SRRT-211ENST00000478693 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
SRRT-211ENST00000478693 SCRIBQ14160 1630 aa22.06■■□□□ 1.12
SRRT-211ENST00000478693 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
SRRT-211ENST00000478693 PABPN1Q86U42 306 aaKnown RBP eCLIP21.92■■□□□ 1.12e-6■■■■□ 19.9
SRRT-211ENST00000478693 BICRAQ9NZM4 1560 aa21.85■■□□□ 1.09
SRRT-211ENST00000478693 SHROOM4Q9ULL8 1493 aa21.69■■□□□ 1.06
SRRT-211ENST00000478693 EIF4G1Q04637 1599 aaKnown RBP21.31■■□□□ 1
SRRT-211ENST00000478693 DNAJC5BQ9UF47 199 aa21.23■□□□□ 0.99
SRRT-211ENST00000478693 CC2D2AQ9P2K1 1620 aa21.18■□□□□ 0.98
SRRT-211ENST00000478693 CECR2Q9BXF3 1484 aa21.15■□□□□ 0.98
SRRT-211ENST00000478693 BAZ1AQ9NRL2 1556 aaPredicted RBP21.09■□□□□ 0.97
SRRT-211ENST00000478693 SMARCA4P51532 1647 aa21.07■□□□□ 0.96
SRRT-211ENST00000478693 MROH2BQ7Z745 1585 aa20.96■□□□□ 0.95
SRRT-211ENST00000478693 SMARCA2P51531 1590 aa20.9■□□□□ 0.94
SRRT-211ENST00000478693 ATAD2BQ9ULI0 1458 aa20.89■□□□□ 0.94
SRRT-211ENST00000478693 NCAPD3P42695 1498 aa20.82■□□□□ 0.92
SRRT-211ENST00000478693 PEG3Q9GZU2 1588 aa20.81■□□□□ 0.92
SRRT-211ENST00000478693 BAZ1BQ9UIG0 1483 aaKnown RBP20.79■□□□□ 0.92
SRRT-211ENST00000478693 HMGXB3Q12766 1538 aa20.78■□□□□ 0.92
SRRT-211ENST00000478693 RSF1Q96T23 1441 aaPredicted RBP20.77■□□□□ 0.91
SRRT-211ENST00000478693 WIZO95785 1651 aa20.75■□□□□ 0.91
SRRT-211ENST00000478693 TOP2AP11388 1531 aaKnown RBP20.57■□□□□ 0.88
SRRT-211ENST00000478693 SUPT5HO00267 1087 aaKnown RBP20.47■□□□□ 0.87
SRRT-211ENST00000478693 NESP48681 1621 aa20.31■□□□□ 0.84
SRRT-211ENST00000478693 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
SRRT-211ENST00000478693 CCDC88BA6NC98 1476 aa20.29■□□□□ 0.84
SRRT-211ENST00000478693 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
SRRT-211ENST00000478693 ERCC6Q03468 1493 aa20.24■□□□□ 0.83
SRRT-211ENST00000478693 PDS5BQ9NTI5 1447 aa20.17■□□□□ 0.82
SRRT-211ENST00000478693 CFTRP13569 1480 aa20.17■□□□□ 0.82
SRRT-211ENST00000478693 KIF21AQ7Z4S6 1674 aa20.08■□□□□ 0.81
SRRT-211ENST00000478693 FANCD2Q9BXW9 1451 aa20.06■□□□□ 0.8
SRRT-211ENST00000478693 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
SRRT-211ENST00000478693 PRDM2Q13029 1718 aa20.04■□□□□ 0.8
SRRT-211ENST00000478693 THOC2Q8NI27 1593 aaKnown RBP19.97■□□□□ 0.79
SRRT-211ENST00000478693 MRC2Q9UBG0 1479 aa19.96■□□□□ 0.79
SRRT-211ENST00000478693 CUX2O14529 1486 aa19.9■□□□□ 0.78
SRRT-211ENST00000478693 WDR62O43379 1518 aa19.86■□□□□ 0.77
SRRT-211ENST00000478693 URB2Q14146 1524 aaKnown RBP19.82■□□□□ 0.76
SRRT-211ENST00000478693 DNMBPQ6XZF7 1577 aa19.75■□□□□ 0.75
SRRT-211ENST00000478693 TOPBP1Q92547 1522 aa19.75■□□□□ 0.75
SRRT-211ENST00000478693 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
SRRT-211ENST00000478693 CUX1P39880 1505 aa19.66■□□□□ 0.74
SRRT-211ENST00000478693 WRNQ14191 1432 aaPredicted RBP eCLIP19.63■□□□□ 0.736e-7■■■■■ 33.4
SRRT-211ENST00000478693 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
SRRT-211ENST00000478693 POLA1P09884 1462 aaPredicted RBP19.59■□□□□ 0.73
SRRT-211ENST00000478693 IFT140Q96RY7 1462 aa19.59■□□□□ 0.73
SRRT-211ENST00000478693 SYNJ1O43426 1573 aa19.56■□□□□ 0.72
SRRT-211ENST00000478693 TOP2BQ02880 1626 aa19.54■□□□□ 0.72
SRRT-211ENST00000478693 BIVM-ERCC5R4GMW8 1640 aa19.54■□□□□ 0.72
SRRT-211ENST00000478693 SOGA1O94964 1423 aa19.51■□□□□ 0.71
SRRT-211ENST00000478693 RAD54L2Q9Y4B4 1467 aa19.51■□□□□ 0.71
SRRT-211ENST00000478693 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
SRRT-211ENST00000478693 ZNF608Q9ULD9 1512 aaPredicted RBP19.46■□□□□ 0.71
SRRT-211ENST00000478693 EIF4G3O43432 1585 aaKnown RBP19.44■□□□□ 0.7
SRRT-211ENST00000478693 TDRD9Q8NDG6 1382 aaKnown RBP19.39■□□□□ 0.69
SRRT-211ENST00000478693 WDR97A6NE52 1622 aa19.39■□□□□ 0.69
SRRT-211ENST00000478693 AQRO60306 1485 aaKnown RBP eCLIP19.38■□□□□ 0.693e-19■■■■■ 39.8
SRRT-211ENST00000478693 ABCA10Q8WWZ4 1543 aa19.38■□□□□ 0.69
SRRT-211ENST00000478693 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
SRRT-211ENST00000478693 GAPVD1Q14C86 1478 aa19.3■□□□□ 0.68
SRRT-211ENST00000478693 ABCA5Q8WWZ7 1642 aa19.29■□□□□ 0.68
SRRT-211ENST00000478693 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
SRRT-211ENST00000478693 PBRM1Q86U86 1689 aa19.27■□□□□ 0.67
SRRT-211ENST00000478693 SNAPC4Q5SXM2 1469 aa19.26■□□□□ 0.67
SRRT-211ENST00000478693 KIF27Q86VH2 1401 aa19.21■□□□□ 0.67
SRRT-211ENST00000478693 MAGI1Q96QZ7 1491 aaPredicted RBP19.21■□□□□ 0.67
SRRT-211ENST00000478693 FBLN2P98095 1184 aa19.19■□□□□ 0.66
SRRT-211ENST00000478693 ERICH3Q5RHP9 1530 aa19.16■□□□□ 0.66
SRRT-211ENST00000478693 CHIC1Q5VXU3 224 aa19.13■□□□□ 0.65
SRRT-211ENST00000478693 CHMP7Q8WUX9 453 aaPredicted RBP19.13■□□□□ 0.65
SRRT-211ENST00000478693 SYNJ2O15056 1496 aa19.13■□□□□ 0.65
SRRT-211ENST00000478693 CHD1O14646 1710 aa19.13■□□□□ 0.65
SRRT-211ENST00000478693 ADAMTS12P58397 1594 aa19.12■□□□□ 0.65
SRRT-211ENST00000478693 OSCARQ8IYS5 282 aa19.09■□□□□ 0.65
SRRT-211ENST00000478693 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.65
SRRT-211ENST00000478693 CUL7Q14999 1698 aa19.05■□□□□ 0.64
SRRT-211ENST00000478693 RUSC2Q8N2Y8 1516 aa19.05■□□□□ 0.64
SRRT-211ENST00000478693 IGF1RP08069 1367 aa19.04■□□□□ 0.64
SRRT-211ENST00000478693 GRIN2AQ12879 1464 aa19.03■□□□□ 0.64
SRRT-211ENST00000478693 DNAJC5Q9H3Z4 198 aa19■□□□□ 0.63
SRRT-211ENST00000478693 CARMIL1Q5VZK9 1371 aa18.98■□□□□ 0.63
SRRT-211ENST00000478693 EEA1Q15075 1411 aa18.97■□□□□ 0.63
SRRT-211ENST00000478693 FAM9AQ8IZU1 332 aaPredicted RBP18.94■□□□□ 0.62
SRRT-211ENST00000478693 CEP170Q5SW79 1584 aa18.92■□□□□ 0.62
SRRT-211ENST00000478693 NUP160Q12769 1436 aa18.91■□□□□ 0.62
SRRT-211ENST00000478693 RAPGEF2Q9Y4G8 1499 aa18.9■□□□□ 0.62
SRRT-211ENST00000478693 CLASP1Q7Z460 1538 aa18.9■□□□□ 0.62
SRRT-211ENST00000478693 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
SRRT-211ENST00000478693 PRXQ9BXM0 1461 aa18.84■□□□□ 0.61
SRRT-211ENST00000478693 ARHGEF11O15085 1522 aa18.8■□□□□ 0.6
SRRT-211ENST00000478693 KIAA0586Q9BVV6 1533 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms