RNA–Protein interactions for RNA: ENST00000478669.1

ZDHHC3-210, Transcript of zinc finger DHHC-type containing 3, humanhuman

TSL 5

Gene ZDHHC3, Length 778 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3-210ENST00000478669 NISCHQ9Y2I1 1504 aa27.15■■□□□ 1.94
ZDHHC3-210ENST00000478669 CCDC180Q9P1Z9 1646 aa24.19■■□□□ 1.46
ZDHHC3-210ENST00000478669 ABCC9O60706 1549 aa23.7■■□□□ 1.38
ZDHHC3-210ENST00000478669 RB1CC1Q8TDY2 1594 aa22.78■■□□□ 1.24
ZDHHC3-210ENST00000478669 NACADO15069 1562 aa22.76■■□□□ 1.23
ZDHHC3-210ENST00000478669 MYO15BQ96JP2 1530 aa22.67■■□□□ 1.22
ZDHHC3-210ENST00000478669 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
ZDHHC3-210ENST00000478669 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
ZDHHC3-210ENST00000478669 DCAF1Q9Y4B6 1507 aa22.51■■□□□ 1.19
ZDHHC3-210ENST00000478669 UNC13AQ9UPW8 1703 aa22.32■■□□□ 1.16
ZDHHC3-210ENST00000478669 BICRAQ9NZM4 1560 aa22.18■■□□□ 1.14
ZDHHC3-210ENST00000478669 PABPN1Q86U42 306 aaKnown RBP eCLIP22.11■■□□□ 1.13
ZDHHC3-210ENST00000478669 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
ZDHHC3-210ENST00000478669 DNAJC5BQ9UF47 199 aa21.96■■□□□ 1.11
ZDHHC3-210ENST00000478669 SHROOM4Q9ULL8 1493 aa21.93■■□□□ 1.1
ZDHHC3-210ENST00000478669 EIF4G1Q04637 1599 aaKnown RBP21.56■■□□□ 1.04
ZDHHC3-210ENST00000478669 CC2D2AQ9P2K1 1620 aa21.48■■□□□ 1.03
ZDHHC3-210ENST00000478669 CECR2Q9BXF3 1484 aa21.33■■□□□ 1.01
ZDHHC3-210ENST00000478669 SMARCA4P51532 1647 aa21.07■□□□□ 0.96
ZDHHC3-210ENST00000478669 NCAPD3P42695 1498 aa21.04■□□□□ 0.96
ZDHHC3-210ENST00000478669 BAZ1AQ9NRL2 1556 aaPredicted RBP21.02■□□□□ 0.95
ZDHHC3-210ENST00000478669 ATAD2BQ9ULI0 1458 aa21.01■□□□□ 0.95
ZDHHC3-210ENST00000478669 SMARCA2P51531 1590 aa20.94■□□□□ 0.94
ZDHHC3-210ENST00000478669 PEG3Q9GZU2 1588 aa20.94■□□□□ 0.94
ZDHHC3-210ENST00000478669 MROH2BQ7Z745 1585 aa20.91■□□□□ 0.94
ZDHHC3-210ENST00000478669 HMGXB3Q12766 1538 aa20.9■□□□□ 0.94
ZDHHC3-210ENST00000478669 BAZ1BQ9UIG0 1483 aaKnown RBP20.76■□□□□ 0.91
ZDHHC3-210ENST00000478669 WIZO95785 1651 aa20.65■□□□□ 0.9
ZDHHC3-210ENST00000478669 RSF1Q96T23 1441 aaPredicted RBP20.63■□□□□ 0.89
ZDHHC3-210ENST00000478669 NESP48681 1621 aa20.51■□□□□ 0.87
ZDHHC3-210ENST00000478669 LAMC3Q9Y6N6 1575 aa20.46■□□□□ 0.87
ZDHHC3-210ENST00000478669 TOP2AP11388 1531 aaKnown RBP20.44■□□□□ 0.86
ZDHHC3-210ENST00000478669 ERCC6Q03468 1493 aa20.39■□□□□ 0.85
ZDHHC3-210ENST00000478669 CADPSQ9ULU8 1353 aa20.37■□□□□ 0.85
ZDHHC3-210ENST00000478669 CUX2O14529 1486 aa20.32■□□□□ 0.84
ZDHHC3-210ENST00000478669 PDS5BQ9NTI5 1447 aa20.28■□□□□ 0.84
ZDHHC3-210ENST00000478669 KIF21AQ7Z4S6 1674 aa20.27■□□□□ 0.84
ZDHHC3-210ENST00000478669 THOC2Q8NI27 1593 aaKnown RBP20.27■□□□□ 0.84
ZDHHC3-210ENST00000478669 CFTRP13569 1480 aa20.26■□□□□ 0.83
ZDHHC3-210ENST00000478669 CCDC88BA6NC98 1476 aa20.2■□□□□ 0.82
ZDHHC3-210ENST00000478669 FANCD2Q9BXW9 1451 aa20.11■□□□□ 0.81
ZDHHC3-210ENST00000478669 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
ZDHHC3-210ENST00000478669 WDR62O43379 1518 aa20.09■□□□□ 0.81
ZDHHC3-210ENST00000478669 CEP164Q9UPV0 1460 aa20.09■□□□□ 0.81
ZDHHC3-210ENST00000478669 PRDM2Q13029 1718 aa20.07■□□□□ 0.8
ZDHHC3-210ENST00000478669 URB2Q14146 1524 aaKnown RBP19.96■□□□□ 0.79
ZDHHC3-210ENST00000478669 SUPT5HO00267 1087 aaKnown RBP19.85■□□□□ 0.77
ZDHHC3-210ENST00000478669 DNAJC5Q9H3Z4 198 aa19.84■□□□□ 0.77
ZDHHC3-210ENST00000478669 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
ZDHHC3-210ENST00000478669 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
ZDHHC3-210ENST00000478669 DNMBPQ6XZF7 1577 aa19.76■□□□□ 0.75
ZDHHC3-210ENST00000478669 IFT140Q96RY7 1462 aa19.7■□□□□ 0.74
ZDHHC3-210ENST00000478669 TARBP1Q13395 1621 aaKnown RBP19.64■□□□□ 0.73
ZDHHC3-210ENST00000478669 ZNF608Q9ULD9 1512 aaPredicted RBP19.63■□□□□ 0.73
ZDHHC3-210ENST00000478669 POLA1P09884 1462 aaPredicted RBP19.63■□□□□ 0.73
ZDHHC3-210ENST00000478669 CUX1P39880 1505 aa19.62■□□□□ 0.73
ZDHHC3-210ENST00000478669 FGD5Q6ZNL6 1462 aa19.54■□□□□ 0.72
ZDHHC3-210ENST00000478669 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
ZDHHC3-210ENST00000478669 RAD54L2Q9Y4B4 1467 aa19.52■□□□□ 0.72
ZDHHC3-210ENST00000478669 SOGA1O94964 1423 aa19.51■□□□□ 0.71
ZDHHC3-210ENST00000478669 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.71
ZDHHC3-210ENST00000478669 WDR97A6NE52 1622 aa19.47■□□□□ 0.71
ZDHHC3-210ENST00000478669 BIVM-ERCC5R4GMW8 1640 aa19.43■□□□□ 0.7
ZDHHC3-210ENST00000478669 TOP2BQ02880 1626 aa19.42■□□□□ 0.7
ZDHHC3-210ENST00000478669 TDRD9Q8NDG6 1382 aaKnown RBP19.41■□□□□ 0.7
ZDHHC3-210ENST00000478669 WRNQ14191 1432 aaPredicted RBP eCLIP19.41■□□□□ 0.7
ZDHHC3-210ENST00000478669 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
ZDHHC3-210ENST00000478669 OSCARQ8IYS5 282 aa19.39■□□□□ 0.69
ZDHHC3-210ENST00000478669 ABCA10Q8WWZ4 1543 aa19.39■□□□□ 0.69
ZDHHC3-210ENST00000478669 ABCA5Q8WWZ7 1642 aa19.33■□□□□ 0.68
ZDHHC3-210ENST00000478669 GRIN2BQ13224 1484 aa19.31■□□□□ 0.68
ZDHHC3-210ENST00000478669 CHD1O14646 1710 aa19.3■□□□□ 0.68
ZDHHC3-210ENST00000478669 GAPVD1Q14C86 1478 aa19.29■□□□□ 0.68
ZDHHC3-210ENST00000478669 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
ZDHHC3-210ENST00000478669 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
ZDHHC3-210ENST00000478669 PBRM1Q86U86 1689 aa19.26■□□□□ 0.67
ZDHHC3-210ENST00000478669 SYNJ2O15056 1496 aa19.21■□□□□ 0.67
ZDHHC3-210ENST00000478669 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
ZDHHC3-210ENST00000478669 FBLN2P98095 1184 aa19.14■□□□□ 0.65
ZDHHC3-210ENST00000478669 ERICH3Q5RHP9 1530 aa19.14■□□□□ 0.65
ZDHHC3-210ENST00000478669 RIMBP3CA6NJZ7 1639 aa19.14■□□□□ 0.65
ZDHHC3-210ENST00000478669 RIMBP3BA6NNM3 1639 aa19.14■□□□□ 0.65
ZDHHC3-210ENST00000478669 RIMBP3Q9UFD9 1639 aa19.14■□□□□ 0.65
ZDHHC3-210ENST00000478669 CHMP7Q8WUX9 453 aaPredicted RBP19.13■□□□□ 0.65
ZDHHC3-210ENST00000478669 ARHGEF11O15085 1522 aa19.13■□□□□ 0.65
ZDHHC3-210ENST00000478669 ADAMTS12P58397 1594 aa19.12■□□□□ 0.65
ZDHHC3-210ENST00000478669 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.64
ZDHHC3-210ENST00000478669 GRIN2AQ12879 1464 aa19.07■□□□□ 0.64
ZDHHC3-210ENST00000478669 NUP160Q12769 1436 aa19.04■□□□□ 0.64
ZDHHC3-210ENST00000478669 IGF1RP08069 1367 aa19■□□□□ 0.63
ZDHHC3-210ENST00000478669 CEP170Q5SW79 1584 aa19■□□□□ 0.63
ZDHHC3-210ENST00000478669 KIF27Q86VH2 1401 aa19■□□□□ 0.63
ZDHHC3-210ENST00000478669 TRIM41Q8WV44 630 aa18.99■□□□□ 0.63
ZDHHC3-210ENST00000478669 ARAP1Q96P48 1450 aa18.98■□□□□ 0.63
ZDHHC3-210ENST00000478669 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
ZDHHC3-210ENST00000478669 CUL7Q14999 1698 aa18.92■□□□□ 0.62
ZDHHC3-210ENST00000478669 CYB5RLQ6IPT4 315 aa18.88■□□□□ 0.61
ZDHHC3-210ENST00000478669 ERCC6L2Q5T890 1561 aa18.85■□□□□ 0.61
ZDHHC3-210ENST00000478669 RUSC2Q8N2Y8 1516 aa18.85■□□□□ 0.61
ZDHHC3-210ENST00000478669 CARMIL1Q5VZK9 1371 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms