RNA–Protein interactions for RNA: ENST00000478594.6

AMT-214, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-214ENST00000478594 NISCHQ9Y2I1 1504 aa35.25■■■■□ 3.23
AMT-214ENST00000478594 CCDC180Q9P1Z9 1646 aa30.79■■■□□ 2.52
AMT-214ENST00000478594 ZCCHC6Q5VYS8 1495 aaKnown RBP29.62■■■□□ 2.33
AMT-214ENST00000478594 DCAF1Q9Y4B6 1507 aa29.18■■■□□ 2.26
AMT-214ENST00000478594 ABCC9O60706 1549 aa29.11■■■□□ 2.25
AMT-214ENST00000478594 DCAF8L2P0C7V8 631 aa28.98■■■□□ 2.23
AMT-214ENST00000478594 MYO15BQ96JP2 1530 aa28.87■■■□□ 2.21
AMT-214ENST00000478594 NACADO15069 1562 aa28.68■■■□□ 2.18
AMT-214ENST00000478594 SHROOM4Q9ULL8 1493 aa28.61■■■□□ 2.17
AMT-214ENST00000478594 RB1CC1Q8TDY2 1594 aa28.43■■■□□ 2.14
AMT-214ENST00000478594 SCRIBQ14160 1630 aa28.25■■■□□ 2.11
AMT-214ENST00000478594 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.06
AMT-214ENST00000478594 BICRAQ9NZM4 1560 aa27.61■■■□□ 2.01
AMT-214ENST00000478594 SUPT5HO00267 1087 aaKnown RBP27.47■■□□□ 1.99
AMT-214ENST00000478594 PABPN1Q86U42 306 aaKnown RBP eCLIP27.41■■□□□ 1.983e-6■■■■□ 23.3
AMT-214ENST00000478594 CECR2Q9BXF3 1484 aa27.38■■□□□ 1.97
AMT-214ENST00000478594 RSF1Q96T23 1441 aaPredicted RBP27.31■■□□□ 1.96
AMT-214ENST00000478594 MROH2BQ7Z745 1585 aa27.22■■□□□ 1.95
AMT-214ENST00000478594 BAZ1AQ9NRL2 1556 aaPredicted RBP27.21■■□□□ 1.95
AMT-214ENST00000478594 SMARCA4P51532 1647 aa27.11■■□□□ 1.93
AMT-214ENST00000478594 WIZO95785 1651 aa26.99■■□□□ 1.91
AMT-214ENST00000478594 PEG3Q9GZU2 1588 aa26.83■■□□□ 1.88
AMT-214ENST00000478594 EIF4G1Q04637 1599 aaKnown RBP26.76■■□□□ 1.87
AMT-214ENST00000478594 TOP2AP11388 1531 aaKnown RBP26.72■■□□□ 1.87
AMT-214ENST00000478594 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
AMT-214ENST00000478594 SMARCA2P51531 1590 aa26.66■■□□□ 1.86
AMT-214ENST00000478594 BAZ1BQ9UIG0 1483 aaKnown RBP26.5■■□□□ 1.83
AMT-214ENST00000478594 NCAPD3P42695 1498 aa26.47■■□□□ 1.83
AMT-214ENST00000478594 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
AMT-214ENST00000478594 CCDC88BA6NC98 1476 aa26.44■■□□□ 1.82
AMT-214ENST00000478594 CC2D2AQ9P2K1 1620 aa26.38■■□□□ 1.81
AMT-214ENST00000478594 CHIC1Q5VXU3 224 aa26.32■■□□□ 1.8
AMT-214ENST00000478594 CFTRP13569 1480 aa25.86■■□□□ 1.73
AMT-214ENST00000478594 TRIM41Q8WV44 630 aa25.85■■□□□ 1.73
AMT-214ENST00000478594 ABCC8Q09428 1581 aa25.84■■□□□ 1.73
AMT-214ENST00000478594 CADPSQ9ULU8 1353 aa25.77■■□□□ 1.72
AMT-214ENST00000478594 DNAJC5BQ9UF47 199 aa25.75■■□□□ 1.71
AMT-214ENST00000478594 PRDM2Q13029 1718 aa25.74■■□□□ 1.71
AMT-214ENST00000478594 WRNQ14191 1432 aaPredicted RBP eCLIP25.69■■□□□ 1.7
AMT-214ENST00000478594 SYNJ1O43426 1573 aa25.61■■□□□ 1.69
AMT-214ENST00000478594 LAMC3Q9Y6N6 1575 aa25.57■■□□□ 1.68
AMT-214ENST00000478594 NESP48681 1621 aa25.55■■□□□ 1.68
AMT-214ENST00000478594 TOP2BQ02880 1626 aa25.52■■□□□ 1.68
AMT-214ENST00000478594 BIVM-ERCC5R4GMW8 1640 aa25.5■■□□□ 1.67
AMT-214ENST00000478594 FANCD2Q9BXW9 1451 aa25.48■■□□□ 1.67
AMT-214ENST00000478594 CUX1P39880 1505 aa25.46■■□□□ 1.67
AMT-214ENST00000478594 PDS5BQ9NTI5 1447 aa25.35■■□□□ 1.65
AMT-214ENST00000478594 SOGA1O94964 1423 aa25.34■■□□□ 1.65
AMT-214ENST00000478594 FAM9AQ8IZU1 332 aaPredicted RBP25.34■■□□□ 1.65
AMT-214ENST00000478594 CEP164Q9UPV0 1460 aa25.32■■□□□ 1.64
AMT-214ENST00000478594 EEA1Q15075 1411 aa25.29■■□□□ 1.64
AMT-214ENST00000478594 LOC105371045A0A1W2PR82 267 aa25.27■■□□□ 1.64
AMT-214ENST00000478594 KIF21AQ7Z4S6 1674 aa25.26■■□□□ 1.63
AMT-214ENST00000478594 RUSC2Q8N2Y8 1516 aa25.26■■□□□ 1.63
AMT-214ENST00000478594 DNMBPQ6XZF7 1577 aa25.25■■□□□ 1.63
AMT-214ENST00000478594 TOPBP1Q92547 1522 aa25.21■■□□□ 1.63
AMT-214ENST00000478594 URB2Q14146 1524 aaKnown RBP25.18■■□□□ 1.62
AMT-214ENST00000478594 FGD5Q6ZNL6 1462 aa25.18■■□□□ 1.62
AMT-214ENST00000478594 CSRNP3Q8WYN3 585 aa25.12■■□□□ 1.61
AMT-214ENST00000478594 POLA1P09884 1462 aaPredicted RBP25.08■■□□□ 1.61
AMT-214ENST00000478594 MRC2Q9UBG0 1479 aa25.05■■□□□ 1.6
AMT-214ENST00000478594 KIF27Q86VH2 1401 aa25.03■■□□□ 1.6
AMT-214ENST00000478594 KIF21BO75037 1637 aa24.98■■□□□ 1.59
AMT-214ENST00000478594 CUX2O14529 1486 aa24.98■■□□□ 1.59
AMT-214ENST00000478594 ABCA10Q8WWZ4 1543 aa24.98■■□□□ 1.59
AMT-214ENST00000478594 RAD54L2Q9Y4B4 1467 aa24.98■■□□□ 1.59
AMT-214ENST00000478594 EHMT2Q96KQ7 1210 aa24.95■■□□□ 1.58
AMT-214ENST00000478594 ERCC6Q03468 1493 aa24.95■■□□□ 1.58
AMT-214ENST00000478594 WDR62O43379 1518 aa24.95■■□□□ 1.58
AMT-214ENST00000478594 WDR97A6NE52 1622 aa24.93■■□□□ 1.58
AMT-214ENST00000478594 GOLGA3Q08378 1498 aa24.92■■□□□ 1.58
AMT-214ENST00000478594 PRXQ9BXM0 1461 aa24.89■■□□□ 1.58
AMT-214ENST00000478594 THOC2Q8NI27 1593 aaKnown RBP24.89■■□□□ 1.58
AMT-214ENST00000478594 TARBP1Q13395 1621 aaKnown RBP24.86■■□□□ 1.57
AMT-214ENST00000478594 IGF1RP08069 1367 aa24.84■■□□□ 1.57
AMT-214ENST00000478594 TNIKQ9UKE5 1360 aa24.84■■□□□ 1.57
AMT-214ENST00000478594 RAPGEF2Q9Y4G8 1499 aa24.84■■□□□ 1.57
AMT-214ENST00000478594 ERICH3Q5RHP9 1530 aa24.84■■□□□ 1.57
AMT-214ENST00000478594 ABCA5Q8WWZ7 1642 aa24.8■■□□□ 1.56
AMT-214ENST00000478594 UBTFP17480 764 aaKnown RBP24.74■■□□□ 1.55
AMT-214ENST00000478594 IFT140Q96RY7 1462 aa24.73■■□□□ 1.55
AMT-214ENST00000478594 TDRD9Q8NDG6 1382 aaKnown RBP24.72■■□□□ 1.55
AMT-214ENST00000478594 GAPVD1Q14C86 1478 aa24.7■■□□□ 1.55
AMT-214ENST00000478594 CARMIL1Q5VZK9 1371 aa24.69■■□□□ 1.54
AMT-214ENST00000478594 CEP162Q5TB80 1403 aa24.69■■□□□ 1.54
AMT-214ENST00000478594 CUL7Q14999 1698 aa24.66■■□□□ 1.54
AMT-214ENST00000478594 ZNF608Q9ULD9 1512 aaPredicted RBP24.6■■□□□ 1.53
AMT-214ENST00000478594 PBRM1Q86U86 1689 aa24.59■■□□□ 1.53
AMT-214ENST00000478594 AQRO60306 1485 aaKnown RBP eCLIP24.59■■□□□ 1.538e-7■■■■□ 24.7
AMT-214ENST00000478594 GRIN2BQ13224 1484 aa24.53■■□□□ 1.52
AMT-214ENST00000478594 EIF4G3O43432 1585 aaKnown RBP24.52■■□□□ 1.52
AMT-214ENST00000478594 CLIP1P30622 1438 aa24.51■■□□□ 1.51
AMT-214ENST00000478594 PCGF6Q9BYE7 350 aa24.49■■□□□ 1.51
AMT-214ENST00000478594 ADAMTS12P58397 1594 aa24.47■■□□□ 1.51
AMT-214ENST00000478594 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
AMT-214ENST00000478594 CTTNBP2Q8WZ74 1663 aa24.38■■□□□ 1.49
AMT-214ENST00000478594 SNAPC4Q5SXM2 1469 aa24.37■■□□□ 1.49
AMT-214ENST00000478594 HRCP23327 699 aa24.35■■□□□ 1.49
AMT-214ENST00000478594 MAGI1Q96QZ7 1491 aaPredicted RBP24.34■■□□□ 1.49
AMT-214ENST00000478594 ARHGAP35Q9NRY4 1499 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms