RNA–Protein interactions for RNA: ENST00000478560.5

CDK18-209, Transcript of cyclin dependent kinase 18, humanhuman

TSL 5

Gene CDK18, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-209ENST00000478560 NISCHQ9Y2I1 1504 aa44.15■■■■■ 4.66
CDK18-209ENST00000478560 CCDC180Q9P1Z9 1646 aa38.96■■■■□ 3.83
CDK18-209ENST00000478560 ABCC9O60706 1549 aa37.64■■■■□ 3.62
CDK18-209ENST00000478560 ZCCHC6Q5VYS8 1495 aaKnown RBP36.97■■■■□ 3.51
CDK18-209ENST00000478560 DCAF1Q9Y4B6 1507 aa36.64■■■■□ 3.46
CDK18-209ENST00000478560 MYO15BQ96JP2 1530 aa36.53■■■■□ 3.44
CDK18-209ENST00000478560 NACADO15069 1562 aa36.44■■■■□ 3.42
CDK18-209ENST00000478560 DCAF8L2P0C7V8 631 aa36.42■■■■□ 3.42
CDK18-209ENST00000478560 RB1CC1Q8TDY2 1594 aa36.4■■■■□ 3.42
CDK18-209ENST00000478560 UNC13AQ9UPW8 1703 aa35.6■■■■□ 3.29
CDK18-209ENST00000478560 SCRIBQ14160 1630 aa35.54■■■■□ 3.28
CDK18-209ENST00000478560 SHROOM4Q9ULL8 1493 aa35.2■■■■□ 3.23
CDK18-209ENST00000478560 BICRAQ9NZM4 1560 aa35.19■■■■□ 3.22
CDK18-209ENST00000478560 PABPN1Q86U42 306 aaKnown RBP eCLIP35.11■■■■□ 3.21
CDK18-209ENST00000478560 DNAJC5BQ9UF47 199 aa34.38■■■■□ 3.09
CDK18-209ENST00000478560 EIF4G1Q04637 1599 aaKnown RBP34.29■■■■□ 3.08
CDK18-209ENST00000478560 CECR2Q9BXF3 1484 aa34.28■■■■□ 3.08
CDK18-209ENST00000478560 BAZ1AQ9NRL2 1556 aaPredicted RBP34.18■■■■□ 3.06
CDK18-209ENST00000478560 CC2D2AQ9P2K1 1620 aa34.14■■■■□ 3.06
CDK18-209ENST00000478560 SMARCA4P51532 1647 aa34.1■■■■□ 3.05
CDK18-209ENST00000478560 MROH2BQ7Z745 1585 aa34.02■■■■□ 3.04
CDK18-209ENST00000478560 RSF1Q96T23 1441 aaPredicted RBP33.9■■■■□ 3.02
CDK18-209ENST00000478560 PEG3Q9GZU2 1588 aa33.81■■■■□ 3
CDK18-209ENST00000478560 SMARCA2P51531 1590 aa33.74■■■□□ 2.99
CDK18-209ENST00000478560 ATAD2BQ9ULI0 1458 aa33.74■■■□□ 2.99
CDK18-209ENST00000478560 WIZO95785 1651 aa33.66■■■□□ 2.98
CDK18-209ENST00000478560 NCAPD3P42695 1498 aa33.63■■■□□ 2.97
CDK18-209ENST00000478560 HMGXB3Q12766 1538 aa33.55■■■□□ 2.96
CDK18-209ENST00000478560 SUPT5HO00267 1087 aaKnown RBP33.48■■■□□ 2.95
CDK18-209ENST00000478560 BAZ1BQ9UIG0 1483 aaKnown RBP33.48■■■□□ 2.95
CDK18-209ENST00000478560 TOP2AP11388 1531 aaKnown RBP33.41■■■□□ 2.94
CDK18-209ENST00000478560 CCDC88BA6NC98 1476 aa32.98■■■□□ 2.87
CDK18-209ENST00000478560 LAMC3Q9Y6N6 1575 aa32.67■■■□□ 2.82
CDK18-209ENST00000478560 CADPSQ9ULU8 1353 aa32.66■■■□□ 2.82
CDK18-209ENST00000478560 CFTRP13569 1480 aa32.64■■■□□ 2.82
CDK18-209ENST00000478560 NESP48681 1621 aa32.57■■■□□ 2.8
CDK18-209ENST00000478560 ERCC6Q03468 1493 aa32.51■■■□□ 2.79
CDK18-209ENST00000478560 PRDM2Q13029 1718 aa32.43■■■□□ 2.78
CDK18-209ENST00000478560 PDS5BQ9NTI5 1447 aa32.42■■■□□ 2.78
CDK18-209ENST00000478560 KIF21AQ7Z4S6 1674 aa32.33■■■□□ 2.77
CDK18-209ENST00000478560 FANCD2Q9BXW9 1451 aa32.28■■■□□ 2.76
CDK18-209ENST00000478560 CUX2O14529 1486 aa32.2■■■□□ 2.75
CDK18-209ENST00000478560 THOC2Q8NI27 1593 aaKnown RBP32.18■■■□□ 2.74
CDK18-209ENST00000478560 CEP164Q9UPV0 1460 aa32.17■■■□□ 2.74
CDK18-209ENST00000478560 MRC2Q9UBG0 1479 aa32.04■■■□□ 2.72
CDK18-209ENST00000478560 ABCC8Q09428 1581 aa31.97■■■□□ 2.71
CDK18-209ENST00000478560 WDR62O43379 1518 aa31.95■■■□□ 2.71
CDK18-209ENST00000478560 WRNQ14191 1432 aaPredicted RBP eCLIP31.94■■■□□ 2.7
CDK18-209ENST00000478560 URB2Q14146 1524 aaKnown RBP31.91■■■□□ 2.7
CDK18-209ENST00000478560 DNMBPQ6XZF7 1577 aa31.89■■■□□ 2.7
CDK18-209ENST00000478560 CUX1P39880 1505 aa31.88■■■□□ 2.69
CDK18-209ENST00000478560 TOPBP1Q92547 1522 aa31.85■■■□□ 2.69
CDK18-209ENST00000478560 SYNJ1O43426 1573 aa31.82■■■□□ 2.68
CDK18-209ENST00000478560 TOP2BQ02880 1626 aa31.82■■■□□ 2.68
CDK18-209ENST00000478560 BIVM-ERCC5R4GMW8 1640 aa31.81■■■□□ 2.68
CDK18-209ENST00000478560 CHIC1Q5VXU3 224 aa31.74■■■□□ 2.67
CDK18-209ENST00000478560 FGD5Q6ZNL6 1462 aa31.65■■■□□ 2.66
CDK18-209ENST00000478560 POLA1P09884 1462 aaPredicted RBP31.64■■■□□ 2.66
CDK18-209ENST00000478560 TRIM41Q8WV44 630 aa31.62■■■□□ 2.65
CDK18-209ENST00000478560 SOGA1O94964 1423 aa31.49■■■□□ 2.63
CDK18-209ENST00000478560 IFT140Q96RY7 1462 aa31.48■■■□□ 2.63
CDK18-209ENST00000478560 TARBP1Q13395 1621 aaKnown RBP31.46■■■□□ 2.63
CDK18-209ENST00000478560 RAD54L2Q9Y4B4 1467 aa31.45■■■□□ 2.62
CDK18-209ENST00000478560 ABCA10Q8WWZ4 1543 aa31.41■■■□□ 2.62
CDK18-209ENST00000478560 WDR97A6NE52 1622 aa31.38■■■□□ 2.61
CDK18-209ENST00000478560 ZNF608Q9ULD9 1512 aaPredicted RBP31.24■■■□□ 2.59
CDK18-209ENST00000478560 ABCA5Q8WWZ7 1642 aa31.22■■■□□ 2.59
CDK18-209ENST00000478560 KIF27Q86VH2 1401 aa31.22■■■□□ 2.59
CDK18-209ENST00000478560 TDRD9Q8NDG6 1382 aaKnown RBP31.19■■■□□ 2.58
CDK18-209ENST00000478560 EIF4G3O43432 1585 aaKnown RBP31.17■■■□□ 2.58
CDK18-209ENST00000478560 EEA1Q15075 1411 aa31.15■■■□□ 2.58
CDK18-209ENST00000478560 GAPVD1Q14C86 1478 aa31.14■■■□□ 2.58
CDK18-209ENST00000478560 AQRO60306 1485 aaKnown RBP eCLIP31.14■■■□□ 2.571e-7■■■□□ 16.7
CDK18-209ENST00000478560 RUSC2Q8N2Y8 1516 aa31.12■■■□□ 2.57
CDK18-209ENST00000478560 GRIN2BQ13224 1484 aa31.06■■■□□ 2.56
CDK18-209ENST00000478560 ERICH3Q5RHP9 1530 aa31.05■■■□□ 2.56
CDK18-209ENST00000478560 DNAJC5Q9H3Z4 198 aa31.04■■■□□ 2.56
CDK18-209ENST00000478560 PBRM1Q86U86 1689 aa31.03■■■□□ 2.56
CDK18-209ENST00000478560 IGF1RP08069 1367 aa31■■■□□ 2.55
CDK18-209ENST00000478560 CSRNP3Q8WYN3 585 aa30.92■■■□□ 2.54
CDK18-209ENST00000478560 MAGI1Q96QZ7 1491 aaPredicted RBP30.92■■■□□ 2.54
CDK18-209ENST00000478560 CUL7Q14999 1698 aa30.9■■■□□ 2.54
CDK18-209ENST00000478560 SNAPC4Q5SXM2 1469 aa30.9■■■□□ 2.54
CDK18-209ENST00000478560 FAM9AQ8IZU1 332 aaPredicted RBP30.89■■■□□ 2.54
CDK18-209ENST00000478560 ADAMTS12P58397 1594 aa30.87■■■□□ 2.53
CDK18-209ENST00000478560 PRXQ9BXM0 1461 aa30.83■■■□□ 2.53
CDK18-209ENST00000478560 FHAD1B1AJZ9 1412 aa30.83■■■□□ 2.53
CDK18-209ENST00000478560 CARMIL1Q5VZK9 1371 aa30.82■■■□□ 2.52
CDK18-209ENST00000478560 OSCARQ8IYS5 282 aa30.82■■■□□ 2.52
CDK18-209ENST00000478560 CHD1O14646 1710 aa30.81■■■□□ 2.52
CDK18-209ENST00000478560 SYNJ2O15056 1496 aa30.77■■■□□ 2.52
CDK18-209ENST00000478560 KIF21BO75037 1637 aa30.76■■■□□ 2.51
CDK18-209ENST00000478560 RAPGEF2Q9Y4G8 1499 aa30.74■■■□□ 2.51
CDK18-209ENST00000478560 GRIN2AQ12879 1464 aa30.66■■■□□ 2.5
CDK18-209ENST00000478560 FBLN2P98095 1184 aa30.65■■■□□ 2.5
CDK18-209ENST00000478560 CHMP7Q8WUX9 453 aaPredicted RBP30.63■■■□□ 2.49
CDK18-209ENST00000478560 GOLGA3Q08378 1498 aa30.62■■■□□ 2.49
CDK18-209ENST00000478560 NUP160Q12769 1436 aa30.52■■■□□ 2.48
CDK18-209ENST00000478560 CEP170Q5SW79 1584 aa30.47■■■□□ 2.47
CDK18-209ENST00000478560 CLASP1Q7Z460 1538 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms