RNA–Protein interactions for RNA: ENST00000478452.1

MMS19-215, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, humanhuman

TSL 2

Gene MMS19, Length 835 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMS19-215ENST00000478452 NISCHQ9Y2I1 1504 aa21.8■■□□□ 1.08
MMS19-215ENST00000478452 ABCC9O60706 1549 aa19.71■□□□□ 0.75
MMS19-215ENST00000478452 CCDC180Q9P1Z9 1646 aa19.41■□□□□ 0.7
MMS19-215ENST00000478452 DCAF8L2P0C7V8 631 aa18.71■□□□□ 0.59
MMS19-215ENST00000478452 DNAJC5BQ9UF47 199 aa18.67■□□□□ 0.58
MMS19-215ENST00000478452 RB1CC1Q8TDY2 1594 aa18.64■□□□□ 0.58
MMS19-215ENST00000478452 NACADO15069 1562 aa18.51■□□□□ 0.55
MMS19-215ENST00000478452 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.554e-7■■□□□ 13.8
MMS19-215ENST00000478452 MYO15BQ96JP2 1530 aa18.23■□□□□ 0.51
MMS19-215ENST00000478452 BICRAQ9NZM4 1560 aa18.06■□□□□ 0.48
MMS19-215ENST00000478452 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
MMS19-215ENST00000478452 ZCCHC6Q5VYS8 1495 aaKnown RBP18■□□□□ 0.47
MMS19-215ENST00000478452 DCAF1Q9Y4B6 1507 aa17.96■□□□□ 0.47
MMS19-215ENST00000478452 SHROOM4Q9ULL8 1493 aa17.83■□□□□ 0.45
MMS19-215ENST00000478452 SCRIBQ14160 1630 aa17.77■□□□□ 0.44
MMS19-215ENST00000478452 CECR2Q9BXF3 1484 aa17.76■□□□□ 0.43
MMS19-215ENST00000478452 CC2D2AQ9P2K1 1620 aa17.7■□□□□ 0.42
MMS19-215ENST00000478452 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
MMS19-215ENST00000478452 DNAJC5Q9H3Z4 198 aa17.22■□□□□ 0.35
MMS19-215ENST00000478452 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
MMS19-215ENST00000478452 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
MMS19-215ENST00000478452 ERCC6Q03468 1493 aa17.03■□□□□ 0.32
MMS19-215ENST00000478452 CUX2O14529 1486 aa16.98■□□□□ 0.31
MMS19-215ENST00000478452 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
MMS19-215ENST00000478452 SMARCA4P51532 1647 aa16.93■□□□□ 0.3
MMS19-215ENST00000478452 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
MMS19-215ENST00000478452 BAZ1AQ9NRL2 1556 aaPredicted RBP16.9■□□□□ 0.3
MMS19-215ENST00000478452 BAZ1BQ9UIG0 1483 aaKnown RBP16.9■□□□□ 0.3
MMS19-215ENST00000478452 NESP48681 1621 aa16.88■□□□□ 0.29
MMS19-215ENST00000478452 MROH2BQ7Z745 1585 aa16.79■□□□□ 0.28
MMS19-215ENST00000478452 PEG3Q9GZU2 1588 aa16.77■□□□□ 0.28
MMS19-215ENST00000478452 PDS5BQ9NTI5 1447 aa16.74■□□□□ 0.27
MMS19-215ENST00000478452 LAMC3Q9Y6N6 1575 aa16.69■□□□□ 0.26
MMS19-215ENST00000478452 CADPSQ9ULU8 1353 aa16.69■□□□□ 0.26
MMS19-215ENST00000478452 THOC2Q8NI27 1593 aaKnown RBP16.58■□□□□ 0.24
MMS19-215ENST00000478452 WIZO95785 1651 aa16.51■□□□□ 0.23
MMS19-215ENST00000478452 MRC2Q9UBG0 1479 aa16.51■□□□□ 0.23
MMS19-215ENST00000478452 RSF1Q96T23 1441 aaPredicted RBP16.49■□□□□ 0.23
MMS19-215ENST00000478452 KIF21AQ7Z4S6 1674 aa16.49■□□□□ 0.23
MMS19-215ENST00000478452 TRIM41Q8WV44 630 aa16.45■□□□□ 0.22
MMS19-215ENST00000478452 FANCD2Q9BXW9 1451 aa16.43■□□□□ 0.22
MMS19-215ENST00000478452 CEP164Q9UPV0 1460 aa16.43■□□□□ 0.22
MMS19-215ENST00000478452 CFTRP13569 1480 aa16.42■□□□□ 0.22
MMS19-215ENST00000478452 WDR62O43379 1518 aa16.41■□□□□ 0.22
MMS19-215ENST00000478452 OSCARQ8IYS5 282 aa16.39■□□□□ 0.21
MMS19-215ENST00000478452 TOP2AP11388 1531 aaKnown RBP16.32■□□□□ 0.2
MMS19-215ENST00000478452 URB2Q14146 1524 aaKnown RBP16.26■□□□□ 0.19
MMS19-215ENST00000478452 CCDC88BA6NC98 1476 aa16.24■□□□□ 0.19
MMS19-215ENST00000478452 IFT140Q96RY7 1462 aa16.14■□□□□ 0.17
MMS19-215ENST00000478452 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
MMS19-215ENST00000478452 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
MMS19-215ENST00000478452 TOPBP1Q92547 1522 aa16.09■□□□□ 0.17
MMS19-215ENST00000478452 FBLN2P98095 1184 aa16.04■□□□□ 0.16
MMS19-215ENST00000478452 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.153e-9■■■■■ 36.3
MMS19-215ENST00000478452 CYB5RLQ6IPT4 315 aa16.01■□□□□ 0.15
MMS19-215ENST00000478452 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.15
MMS19-215ENST00000478452 SOGA1O94964 1423 aa15.95■□□□□ 0.14
MMS19-215ENST00000478452 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
MMS19-215ENST00000478452 TDRD9Q8NDG6 1382 aaKnown RBP15.94■□□□□ 0.14
MMS19-215ENST00000478452 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
MMS19-215ENST00000478452 RIMBP3CA6NJZ7 1639 aa15.91■□□□□ 0.14
MMS19-215ENST00000478452 RIMBP3BA6NNM3 1639 aa15.91■□□□□ 0.14
MMS19-215ENST00000478452 RIMBP3Q9UFD9 1639 aa15.91■□□□□ 0.14
MMS19-215ENST00000478452 ARHGEF11O15085 1522 aa15.91■□□□□ 0.14
MMS19-215ENST00000478452 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
MMS19-215ENST00000478452 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
MMS19-215ENST00000478452 EIF4G3O43432 1585 aaKnown RBP15.88■□□□□ 0.13
MMS19-215ENST00000478452 TRHP20396 242 aaPredicted RBP15.88■□□□□ 0.13
MMS19-215ENST00000478452 TARBP1Q13395 1621 aaKnown RBP15.87■□□□□ 0.13
MMS19-215ENST00000478452 SUPT5HO00267 1087 aaKnown RBP15.85■□□□□ 0.13
MMS19-215ENST00000478452 FGD5Q6ZNL6 1462 aa15.81■□□□□ 0.12
MMS19-215ENST00000478452 SNAPC4Q5SXM2 1469 aa15.78■□□□□ 0.12
MMS19-215ENST00000478452 CUX1P39880 1505 aa15.76■□□□□ 0.11
MMS19-215ENST00000478452 GRIN2BQ13224 1484 aa15.76■□□□□ 0.11
MMS19-215ENST00000478452 ARAP1Q96P48 1450 aa15.75■□□□□ 0.11
MMS19-215ENST00000478452 MAGI1Q96QZ7 1491 aaPredicted RBP15.73■□□□□ 0.11
MMS19-215ENST00000478452 CHD1O14646 1710 aa15.72■□□□□ 0.11
MMS19-215ENST00000478452 GAPVD1Q14C86 1478 aa15.7■□□□□ 0.1
MMS19-215ENST00000478452 WDR97A6NE52 1622 aa15.69■□□□□ 0.1
MMS19-215ENST00000478452 SYNJ2O15056 1496 aa15.69■□□□□ 0.1
MMS19-215ENST00000478452 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
MMS19-215ENST00000478452 CLASP1Q7Z460 1538 aa15.63■□□□□ 0.09
MMS19-215ENST00000478452 WRNQ14191 1432 aaPredicted RBP eCLIP15.63■□□□□ 0.09
MMS19-215ENST00000478452 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
MMS19-215ENST00000478452 GRIN2AQ12879 1464 aa15.52■□□□□ 0.08
MMS19-215ENST00000478452 FHAD1B1AJZ9 1412 aa15.51■□□□□ 0.07
MMS19-215ENST00000478452 ABCA5Q8WWZ7 1642 aa15.5■□□□□ 0.07
MMS19-215ENST00000478452 JPH4Q96JJ6 628 aa15.49■□□□□ 0.07
MMS19-215ENST00000478452 NUP160Q12769 1436 aa15.48■□□□□ 0.07
MMS19-215ENST00000478452 AEBP2Q6ZN18 517 aaPredicted RBP15.47■□□□□ 0.07
MMS19-215ENST00000478452 PBRM1Q86U86 1689 aa15.47■□□□□ 0.07
MMS19-215ENST00000478452 TOP2BQ02880 1626 aa15.45■□□□□ 0.06
MMS19-215ENST00000478452 ERCC6L2Q5T890 1561 aa15.41■□□□□ 0.06
MMS19-215ENST00000478452 NPM1P06748 294 aaKnown RBP eCLIP15.41■□□□□ 0.06
MMS19-215ENST00000478452 ERICH3Q5RHP9 1530 aa15.41■□□□□ 0.06
MMS19-215ENST00000478452 PRG4Q92954 1404 aaPredicted RBP15.41■□□□□ 0.06
MMS19-215ENST00000478452 CEP170Q5SW79 1584 aa15.41■□□□□ 0.06
MMS19-215ENST00000478452 ADAMTS12P58397 1594 aa15.4■□□□□ 0.06
MMS19-215ENST00000478452 BIVM-ERCC5R4GMW8 1640 aa15.39■□□□□ 0.05
MMS19-215ENST00000478452 IGF1RP08069 1367 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms