RNA–Protein interactions for RNA: ENST00000478350.1

EXD3-207, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 4

Gene EXD3, Length 556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-207ENST00000478350 NISCHQ9Y2I1 1504 aa37.61■■■■□ 3.61
EXD3-207ENST00000478350 CCDC180Q9P1Z9 1646 aa33.55■■■□□ 2.96
EXD3-207ENST00000478350 ABCC9O60706 1549 aa33.22■■■□□ 2.91
EXD3-207ENST00000478350 RB1CC1Q8TDY2 1594 aa31.8■■■□□ 2.68
EXD3-207ENST00000478350 DCAF8L2P0C7V8 631 aa31.72■■■□□ 2.67
EXD3-207ENST00000478350 NACADO15069 1562 aa31.68■■■□□ 2.66
EXD3-207ENST00000478350 MYO15BQ96JP2 1530 aa31.36■■■□□ 2.61
EXD3-207ENST00000478350 ZCCHC6Q5VYS8 1495 aaKnown RBP31.22■■■□□ 2.59
EXD3-207ENST00000478350 DCAF1Q9Y4B6 1507 aa31.09■■■□□ 2.57
EXD3-207ENST00000478350 PABPN1Q86U42 306 aaKnown RBP eCLIP31.03■■■□□ 2.56
EXD3-207ENST00000478350 UNC13AQ9UPW8 1703 aa30.98■■■□□ 2.55
EXD3-207ENST00000478350 DNAJC5BQ9UF47 199 aa30.83■■■□□ 2.53
EXD3-207ENST00000478350 BICRAQ9NZM4 1560 aa30.79■■■□□ 2.52
EXD3-207ENST00000478350 SCRIBQ14160 1630 aa30.59■■■□□ 2.49
EXD3-207ENST00000478350 SHROOM4Q9ULL8 1493 aa30.48■■■□□ 2.47
EXD3-207ENST00000478350 EIF4G1Q04637 1599 aaKnown RBP30.03■■■□□ 2.4
EXD3-207ENST00000478350 CC2D2AQ9P2K1 1620 aa30■■■□□ 2.39
EXD3-207ENST00000478350 CECR2Q9BXF3 1484 aa29.89■■■□□ 2.38
EXD3-207ENST00000478350 NCAPD3P42695 1498 aa29.25■■■□□ 2.27
EXD3-207ENST00000478350 SMARCA4P51532 1647 aa29.23■■■□□ 2.27
EXD3-207ENST00000478350 ATAD2BQ9ULI0 1458 aa29.19■■■□□ 2.26
EXD3-207ENST00000478350 BAZ1AQ9NRL2 1556 aaPredicted RBP29.18■■■□□ 2.26
EXD3-207ENST00000478350 SMARCA2P51531 1590 aa29.15■■■□□ 2.26
EXD3-207ENST00000478350 HMGXB3Q12766 1538 aa29.03■■■□□ 2.24
EXD3-207ENST00000478350 MROH2BQ7Z745 1585 aa28.96■■■□□ 2.23
EXD3-207ENST00000478350 PEG3Q9GZU2 1588 aa28.94■■■□□ 2.22
EXD3-207ENST00000478350 BAZ1BQ9UIG0 1483 aaKnown RBP28.94■■■□□ 2.22
EXD3-207ENST00000478350 ERCC6Q03468 1493 aa28.69■■■□□ 2.18
EXD3-207ENST00000478350 WIZO95785 1651 aa28.63■■■□□ 2.17
EXD3-207ENST00000478350 NESP48681 1621 aa28.61■■■□□ 2.17
EXD3-207ENST00000478350 RSF1Q96T23 1441 aaPredicted RBP28.53■■■□□ 2.16
EXD3-207ENST00000478350 LAMC3Q9Y6N6 1575 aa28.51■■■□□ 2.15
EXD3-207ENST00000478350 CUX2O14529 1486 aa28.49■■■□□ 2.15
EXD3-207ENST00000478350 CADPSQ9ULU8 1353 aa28.4■■■□□ 2.14
EXD3-207ENST00000478350 PDS5BQ9NTI5 1447 aa28.39■■■□□ 2.14
EXD3-207ENST00000478350 TOP2AP11388 1531 aaKnown RBP28.31■■■□□ 2.12
EXD3-207ENST00000478350 KIF21AQ7Z4S6 1674 aa28.23■■■□□ 2.11
EXD3-207ENST00000478350 THOC2Q8NI27 1593 aaKnown RBP28.21■■■□□ 2.11
EXD3-207ENST00000478350 CFTRP13569 1480 aa28.12■■■□□ 2.09
EXD3-207ENST00000478350 DNAJC5Q9H3Z4 198 aa28.09■■■□□ 2.09
EXD3-207ENST00000478350 MRC2Q9UBG0 1479 aa28.07■■■□□ 2.08
EXD3-207ENST00000478350 FANCD2Q9BXW9 1451 aa28.04■■■□□ 2.08
EXD3-207ENST00000478350 CEP164Q9UPV0 1460 aa28.04■■■□□ 2.08
EXD3-207ENST00000478350 CCDC88BA6NC98 1476 aa28.02■■■□□ 2.08
EXD3-207ENST00000478350 WDR62O43379 1518 aa27.95■■■□□ 2.06
EXD3-207ENST00000478350 PRDM2Q13029 1718 aa27.81■■■□□ 2.04
EXD3-207ENST00000478350 URB2Q14146 1524 aaKnown RBP27.76■■■□□ 2.03
EXD3-207ENST00000478350 SUPT5HO00267 1087 aaKnown RBP27.65■■■□□ 2.02
EXD3-207ENST00000478350 ABCC8Q09428 1581 aa27.58■■■□□ 2.01
EXD3-207ENST00000478350 TOPBP1Q92547 1522 aa27.54■■■□□ 2
EXD3-207ENST00000478350 IFT140Q96RY7 1462 aa27.48■■□□□ 1.99
EXD3-207ENST00000478350 DNMBPQ6XZF7 1577 aa27.47■■□□□ 1.99
EXD3-207ENST00000478350 ZNF608Q9ULD9 1512 aaPredicted RBP27.35■■□□□ 1.97
EXD3-207ENST00000478350 OSCARQ8IYS5 282 aa27.34■■□□□ 1.97
EXD3-207ENST00000478350 POLA1P09884 1462 aaPredicted RBP27.28■■□□□ 1.96
EXD3-207ENST00000478350 TARBP1Q13395 1621 aaKnown RBP27.23■■□□□ 1.95
EXD3-207ENST00000478350 SOGA1O94964 1423 aa27.23■■□□□ 1.95
EXD3-207ENST00000478350 AQRO60306 1485 aaKnown RBP eCLIP27.19■■□□□ 1.94
EXD3-207ENST00000478350 EIF4G3O43432 1585 aaKnown RBP27.19■■□□□ 1.94
EXD3-207ENST00000478350 CUX1P39880 1505 aa27.19■■□□□ 1.94
EXD3-207ENST00000478350 RAD54L2Q9Y4B4 1467 aa27.18■■□□□ 1.94
EXD3-207ENST00000478350 FGD5Q6ZNL6 1462 aa27.17■■□□□ 1.94
EXD3-207ENST00000478350 TDRD9Q8NDG6 1382 aaKnown RBP27.1■■□□□ 1.93
EXD3-207ENST00000478350 WDR97A6NE52 1622 aa27.02■■□□□ 1.92
EXD3-207ENST00000478350 FBLN2P98095 1184 aa27.02■■□□□ 1.92
EXD3-207ENST00000478350 TRIM41Q8WV44 630 aa27.02■■□□□ 1.92
EXD3-207ENST00000478350 WRNQ14191 1432 aaPredicted RBP eCLIP26.93■■□□□ 1.9
EXD3-207ENST00000478350 GRIN2BQ13224 1484 aa26.93■■□□□ 1.9
EXD3-207ENST00000478350 CHD1O14646 1710 aa26.92■■□□□ 1.9
EXD3-207ENST00000478350 SNAPC4Q5SXM2 1469 aa26.9■■□□□ 1.9
EXD3-207ENST00000478350 ABCA10Q8WWZ4 1543 aa26.9■■□□□ 1.9
EXD3-207ENST00000478350 CHMP7Q8WUX9 453 aaPredicted RBP26.89■■□□□ 1.9
EXD3-207ENST00000478350 GAPVD1Q14C86 1478 aa26.87■■□□□ 1.89
EXD3-207ENST00000478350 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
EXD3-207ENST00000478350 TOP2BQ02880 1626 aa26.87■■□□□ 1.89
EXD3-207ENST00000478350 BIVM-ERCC5R4GMW8 1640 aa26.84■■□□□ 1.89
EXD3-207ENST00000478350 SYNJ1O43426 1573 aa26.81■■□□□ 1.88
EXD3-207ENST00000478350 RIMBP3CA6NJZ7 1639 aa26.81■■□□□ 1.88
EXD3-207ENST00000478350 RIMBP3BA6NNM3 1639 aa26.81■■□□□ 1.88
EXD3-207ENST00000478350 RIMBP3Q9UFD9 1639 aa26.81■■□□□ 1.88
EXD3-207ENST00000478350 SYNJ2O15056 1496 aa26.78■■□□□ 1.88
EXD3-207ENST00000478350 ARHGEF11O15085 1522 aa26.78■■□□□ 1.88
EXD3-207ENST00000478350 PBRM1Q86U86 1689 aa26.77■■□□□ 1.88
EXD3-207ENST00000478350 ABCA5Q8WWZ7 1642 aa26.76■■□□□ 1.87
EXD3-207ENST00000478350 CYB5RLQ6IPT4 315 aa26.66■■□□□ 1.86
EXD3-207ENST00000478350 CLASP1Q7Z460 1538 aa26.63■■□□□ 1.85
EXD3-207ENST00000478350 ERICH3Q5RHP9 1530 aa26.57■■□□□ 1.84
EXD3-207ENST00000478350 FHAD1B1AJZ9 1412 aa26.56■■□□□ 1.84
EXD3-207ENST00000478350 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
EXD3-207ENST00000478350 ARAP1Q96P48 1450 aa26.54■■□□□ 1.84
EXD3-207ENST00000478350 ADAMTS12P58397 1594 aa26.54■■□□□ 1.84
EXD3-207ENST00000478350 NUP160Q12769 1436 aa26.44■■□□□ 1.82
EXD3-207ENST00000478350 KIF27Q86VH2 1401 aa26.42■■□□□ 1.82
EXD3-207ENST00000478350 CEP170Q5SW79 1584 aa26.4■■□□□ 1.82
EXD3-207ENST00000478350 IGF1RP08069 1367 aa26.36■■□□□ 1.81
EXD3-207ENST00000478350 JPH4Q96JJ6 628 aa26.27■■□□□ 1.8
EXD3-207ENST00000478350 TRHP20396 242 aaPredicted RBP26.26■■□□□ 1.79
EXD3-207ENST00000478350 CUL7Q14999 1698 aa26.25■■□□□ 1.79
EXD3-207ENST00000478350 SHROOM2Q13796 1616 aa26.25■■□□□ 1.79
EXD3-207ENST00000478350 ERCC6L2Q5T890 1561 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 216.3 ms