RNA–Protein interactions for RNA: ENST00000478337.1

PMM1-206, Transcript of phosphomannomutase 1, humanhuman

TSL 2

Gene PMM1, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM1-206ENST00000478337 NISCHQ9Y2I1 1504 aa31.3■■■□□ 2.6
PMM1-206ENST00000478337 ABCC9O60706 1549 aa27.98■■■□□ 2.07
PMM1-206ENST00000478337 CCDC180Q9P1Z9 1646 aa27.89■■■□□ 2.05
PMM1-206ENST00000478337 DCAF8L2P0C7V8 631 aa26.59■■□□□ 1.85
PMM1-206ENST00000478337 RB1CC1Q8TDY2 1594 aa26.56■■□□□ 1.84
PMM1-206ENST00000478337 NACADO15069 1562 aa26.41■■□□□ 1.82
PMM1-206ENST00000478337 DNAJC5BQ9UF47 199 aa26.28■■□□□ 1.8
PMM1-206ENST00000478337 PABPN1Q86U42 306 aaKnown RBP eCLIP26.19■■□□□ 1.78
PMM1-206ENST00000478337 MYO15BQ96JP2 1530 aa26.06■■□□□ 1.76
PMM1-206ENST00000478337 ZCCHC6Q5VYS8 1495 aaKnown RBP25.93■■□□□ 1.74
PMM1-206ENST00000478337 UNC13AQ9UPW8 1703 aa25.92■■□□□ 1.74
PMM1-206ENST00000478337 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.73
PMM1-206ENST00000478337 DCAF1Q9Y4B6 1507 aa25.78■■□□□ 1.72
PMM1-206ENST00000478337 SCRIBQ14160 1630 aa25.55■■□□□ 1.68
PMM1-206ENST00000478337 SHROOM4Q9ULL8 1493 aa25.37■■□□□ 1.65
PMM1-206ENST00000478337 CC2D2AQ9P2K1 1620 aa25.21■■□□□ 1.63
PMM1-206ENST00000478337 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
PMM1-206ENST00000478337 CECR2Q9BXF3 1484 aa25.16■■□□□ 1.62
PMM1-206ENST00000478337 NCAPD3P42695 1498 aa24.45■■□□□ 1.51
PMM1-206ENST00000478337 ATAD2BQ9ULI0 1458 aa24.41■■□□□ 1.5
PMM1-206ENST00000478337 SMARCA4P51532 1647 aa24.34■■□□□ 1.49
PMM1-206ENST00000478337 SMARCA2P51531 1590 aa24.27■■□□□ 1.48
PMM1-206ENST00000478337 BAZ1AQ9NRL2 1556 aaPredicted RBP24.24■■□□□ 1.47
PMM1-206ENST00000478337 HMGXB3Q12766 1538 aa24.19■■□□□ 1.46
PMM1-206ENST00000478337 MROH2BQ7Z745 1585 aa24.16■■□□□ 1.46
PMM1-206ENST00000478337 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
PMM1-206ENST00000478337 ERCC6Q03468 1493 aa24.11■■□□□ 1.45
PMM1-206ENST00000478337 NESP48681 1621 aa24.08■■□□□ 1.45
PMM1-206ENST00000478337 PEG3Q9GZU2 1588 aa24.08■■□□□ 1.44
PMM1-206ENST00000478337 DNAJC5Q9H3Z4 198 aa23.97■■□□□ 1.43
PMM1-206ENST00000478337 CUX2O14529 1486 aa23.96■■□□□ 1.43
PMM1-206ENST00000478337 WIZO95785 1651 aa23.84■■□□□ 1.41
PMM1-206ENST00000478337 LAMC3Q9Y6N6 1575 aa23.8■■□□□ 1.4
PMM1-206ENST00000478337 CADPSQ9ULU8 1353 aa23.76■■□□□ 1.39
PMM1-206ENST00000478337 PDS5BQ9NTI5 1447 aa23.74■■□□□ 1.39
PMM1-206ENST00000478337 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
PMM1-206ENST00000478337 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
PMM1-206ENST00000478337 KIF21AQ7Z4S6 1674 aa23.65■■□□□ 1.38
PMM1-206ENST00000478337 MRC2Q9UBG0 1479 aa23.5■■□□□ 1.35
PMM1-206ENST00000478337 TOP2AP11388 1531 aaKnown RBP23.5■■□□□ 1.35
PMM1-206ENST00000478337 CFTRP13569 1480 aa23.47■■□□□ 1.35
PMM1-206ENST00000478337 FANCD2Q9BXW9 1451 aa23.45■■□□□ 1.34
PMM1-206ENST00000478337 CEP164Q9UPV0 1460 aa23.43■■□□□ 1.34
PMM1-206ENST00000478337 WDR62O43379 1518 aa23.41■■□□□ 1.34
PMM1-206ENST00000478337 CCDC88BA6NC98 1476 aa23.33■■□□□ 1.33
PMM1-206ENST00000478337 URB2Q14146 1524 aaKnown RBP23.25■■□□□ 1.31
PMM1-206ENST00000478337 PRDM2Q13029 1718 aa23.05■■□□□ 1.28
PMM1-206ENST00000478337 OSCARQ8IYS5 282 aa23.04■■□□□ 1.28
PMM1-206ENST00000478337 TRIM41Q8WV44 630 aa23.01■■□□□ 1.27
PMM1-206ENST00000478337 TOPBP1Q92547 1522 aa23.01■■□□□ 1.27
PMM1-206ENST00000478337 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
PMM1-206ENST00000478337 IFT140Q96RY7 1462 aa22.97■■□□□ 1.27
PMM1-206ENST00000478337 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
PMM1-206ENST00000478337 SUPT5HO00267 1087 aaKnown RBP22.9■■□□□ 1.26
PMM1-206ENST00000478337 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.25
PMM1-206ENST00000478337 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.241e-7■■■■■ 37.4
PMM1-206ENST00000478337 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
PMM1-206ENST00000478337 RAD54L2Q9Y4B4 1467 aa22.77■■□□□ 1.24
PMM1-206ENST00000478337 TARBP1Q13395 1621 aaKnown RBP22.76■■□□□ 1.23
PMM1-206ENST00000478337 EIF4G3O43432 1585 aaKnown RBP22.75■■□□□ 1.23
PMM1-206ENST00000478337 SOGA1O94964 1423 aa22.74■■□□□ 1.23
PMM1-206ENST00000478337 TDRD9Q8NDG6 1382 aaKnown RBP22.72■■□□□ 1.23
PMM1-206ENST00000478337 FBLN2P98095 1184 aa22.71■■□□□ 1.23
PMM1-206ENST00000478337 CUX1P39880 1505 aa22.67■■□□□ 1.22
PMM1-206ENST00000478337 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
PMM1-206ENST00000478337 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
PMM1-206ENST00000478337 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
PMM1-206ENST00000478337 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
PMM1-206ENST00000478337 ARHGEF11O15085 1522 aa22.56■■□□□ 1.2
PMM1-206ENST00000478337 CHD1O14646 1710 aa22.54■■□□□ 1.2
PMM1-206ENST00000478337 CYB5RLQ6IPT4 315 aa22.54■■□□□ 1.2
PMM1-206ENST00000478337 CHMP7Q8WUX9 453 aaPredicted RBP22.52■■□□□ 1.2
PMM1-206ENST00000478337 SNAPC4Q5SXM2 1469 aa22.52■■□□□ 1.2
PMM1-206ENST00000478337 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
PMM1-206ENST00000478337 WDR97A6NE52 1622 aa22.43■■□□□ 1.18
PMM1-206ENST00000478337 GAPVD1Q14C86 1478 aa22.42■■□□□ 1.18
PMM1-206ENST00000478337 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
PMM1-206ENST00000478337 ABCA10Q8WWZ4 1543 aa22.39■■□□□ 1.17
PMM1-206ENST00000478337 SYNJ2O15056 1496 aa22.37■■□□□ 1.17
PMM1-206ENST00000478337 ARAP1Q96P48 1450 aa22.36■■□□□ 1.17
PMM1-206ENST00000478337 WRNQ14191 1432 aaPredicted RBP eCLIP22.36■■□□□ 1.179e-6■■■■■ 50.1
PMM1-206ENST00000478337 CLASP1Q7Z460 1538 aa22.32■■□□□ 1.16
PMM1-206ENST00000478337 SYNJ1O43426 1573 aa22.3■■□□□ 1.16
PMM1-206ENST00000478337 ABCA5Q8WWZ7 1642 aa22.29■■□□□ 1.16
PMM1-206ENST00000478337 PBRM1Q86U86 1689 aa22.29■■□□□ 1.16
PMM1-206ENST00000478337 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
PMM1-206ENST00000478337 BIVM-ERCC5R4GMW8 1640 aa22.24■■□□□ 1.15
PMM1-206ENST00000478337 TRHP20396 242 aaPredicted RBP22.23■■□□□ 1.15
PMM1-206ENST00000478337 GRIN2AQ12879 1464 aa22.17■■□□□ 1.14
PMM1-206ENST00000478337 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.13
PMM1-206ENST00000478337 ADAMTS12P58397 1594 aa22.12■■□□□ 1.13
PMM1-206ENST00000478337 NUP160Q12769 1436 aa22.1■■□□□ 1.13
PMM1-206ENST00000478337 CEP170Q5SW79 1584 aa22.08■■□□□ 1.13
PMM1-206ENST00000478337 ERICH3Q5RHP9 1530 aa22.08■■□□□ 1.13
PMM1-206ENST00000478337 ERCC6L2Q5T890 1561 aa22.06■■□□□ 1.12
PMM1-206ENST00000478337 JPH4Q96JJ6 628 aa21.99■■□□□ 1.11
PMM1-206ENST00000478337 IGF1RP08069 1367 aa21.97■■□□□ 1.11
PMM1-206ENST00000478337 PRG4Q92954 1404 aaPredicted RBP21.93■■□□□ 1.1
PMM1-206ENST00000478337 SHROOM2Q13796 1616 aa21.92■■□□□ 1.1
PMM1-206ENST00000478337 KIF27Q86VH2 1401 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms