RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 NISCHQ9Y2I1 1504 aa33.99■■■■□ 3.03
RCC1-211ENST00000478232 CCDC180Q9P1Z9 1646 aa30.32■■■□□ 2.44
RCC1-211ENST00000478232 ABCC9O60706 1549 aa30.17■■■□□ 2.42
RCC1-211ENST00000478232 RB1CC1Q8TDY2 1594 aa28.81■■■□□ 2.2
RCC1-211ENST00000478232 DCAF8L2P0C7V8 631 aa28.71■■■□□ 2.19
RCC1-211ENST00000478232 NACADO15069 1562 aa28.69■■■□□ 2.18
RCC1-211ENST00000478232 MYO15BQ96JP2 1530 aa28.39■■■□□ 2.14
RCC1-211ENST00000478232 PABPN1Q86U42 306 aaKnown RBP eCLIP28.19■■■□□ 2.1
RCC1-211ENST00000478232 ZCCHC6Q5VYS8 1495 aaKnown RBP28.17■■■□□ 2.1
RCC1-211ENST00000478232 DNAJC5BQ9UF47 199 aa28.17■■■□□ 2.1
RCC1-211ENST00000478232 DCAF1Q9Y4B6 1507 aa28.1■■■□□ 2.09
RCC1-211ENST00000478232 UNC13AQ9UPW8 1703 aa28.02■■■□□ 2.08
RCC1-211ENST00000478232 BICRAQ9NZM4 1560 aa27.92■■■□□ 2.06
RCC1-211ENST00000478232 SHROOM4Q9ULL8 1493 aa27.63■■■□□ 2.01
RCC1-211ENST00000478232 SCRIBQ14160 1630 aa27.63■■■□□ 2.01
RCC1-211ENST00000478232 EIF4G1Q04637 1599 aaKnown RBP27.23■■□□□ 1.95
RCC1-211ENST00000478232 CC2D2AQ9P2K1 1620 aa27.23■■□□□ 1.95
RCC1-211ENST00000478232 CECR2Q9BXF3 1484 aa27.17■■□□□ 1.94
RCC1-211ENST00000478232 NCAPD3P42695 1498 aa26.53■■□□□ 1.84
RCC1-211ENST00000478232 ATAD2BQ9ULI0 1458 aa26.44■■□□□ 1.82
RCC1-211ENST00000478232 SMARCA4P51532 1647 aa26.4■■□□□ 1.82
RCC1-211ENST00000478232 SMARCA2P51531 1590 aa26.37■■□□□ 1.81
RCC1-211ENST00000478232 BAZ1AQ9NRL2 1556 aaPredicted RBP26.36■■□□□ 1.81
RCC1-211ENST00000478232 HMGXB3Q12766 1538 aa26.27■■□□□ 1.8
RCC1-211ENST00000478232 BAZ1BQ9UIG0 1483 aaKnown RBP26.18■■□□□ 1.78
RCC1-211ENST00000478232 PEG3Q9GZU2 1588 aa26.18■■□□□ 1.78
RCC1-211ENST00000478232 MROH2BQ7Z745 1585 aa26.16■■□□□ 1.78
RCC1-211ENST00000478232 ERCC6Q03468 1493 aa26.04■■□□□ 1.76
RCC1-211ENST00000478232 NESP48681 1621 aa25.96■■□□□ 1.75
RCC1-211ENST00000478232 CUX2O14529 1486 aa25.91■■□□□ 1.74
RCC1-211ENST00000478232 LAMC3Q9Y6N6 1575 aa25.83■■□□□ 1.73
RCC1-211ENST00000478232 WIZO95785 1651 aa25.82■■□□□ 1.72
RCC1-211ENST00000478232 RSF1Q96T23 1441 aaPredicted RBP25.76■■□□□ 1.71
RCC1-211ENST00000478232 PDS5BQ9NTI5 1447 aa25.75■■□□□ 1.71
RCC1-211ENST00000478232 DNAJC5Q9H3Z4 198 aa25.75■■□□□ 1.71
RCC1-211ENST00000478232 CADPSQ9ULU8 1353 aa25.74■■□□□ 1.71
RCC1-211ENST00000478232 THOC2Q8NI27 1593 aaKnown RBP25.58■■□□□ 1.69
RCC1-211ENST00000478232 KIF21AQ7Z4S6 1674 aa25.55■■□□□ 1.68
RCC1-211ENST00000478232 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
RCC1-211ENST00000478232 CFTRP13569 1480 aa25.47■■□□□ 1.67
RCC1-211ENST00000478232 MRC2Q9UBG0 1479 aa25.45■■□□□ 1.66
RCC1-211ENST00000478232 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
RCC1-211ENST00000478232 CEP164Q9UPV0 1460 aa25.39■■□□□ 1.65
RCC1-211ENST00000478232 WDR62O43379 1518 aa25.34■■□□□ 1.65
RCC1-211ENST00000478232 CCDC88BA6NC98 1476 aa25.3■■□□□ 1.64
RCC1-211ENST00000478232 URB2Q14146 1524 aaKnown RBP25.15■■□□□ 1.62
RCC1-211ENST00000478232 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
RCC1-211ENST00000478232 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
RCC1-211ENST00000478232 TOPBP1Q92547 1522 aa24.93■■□□□ 1.58
RCC1-211ENST00000478232 IFT140Q96RY7 1462 aa24.9■■□□□ 1.58
RCC1-211ENST00000478232 OSCARQ8IYS5 282 aa24.9■■□□□ 1.58
RCC1-211ENST00000478232 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
RCC1-211ENST00000478232 DNMBPQ6XZF7 1577 aa24.83■■□□□ 1.57
RCC1-211ENST00000478232 ZNF608Q9ULD9 1512 aaPredicted RBP24.8■■□□□ 1.56
RCC1-211ENST00000478232 POLA1P09884 1462 aaPredicted RBP24.69■■□□□ 1.54
RCC1-211ENST00000478232 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
RCC1-211ENST00000478232 TARBP1Q13395 1621 aaKnown RBP24.65■■□□□ 1.54
RCC1-211ENST00000478232 SOGA1O94964 1423 aa24.65■■□□□ 1.54
RCC1-211ENST00000478232 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.542e-9■■■■■ 39.4
RCC1-211ENST00000478232 EIF4G3O43432 1585 aaKnown RBP24.61■■□□□ 1.53
RCC1-211ENST00000478232 RAD54L2Q9Y4B4 1467 aa24.6■■□□□ 1.53
RCC1-211ENST00000478232 TDRD9Q8NDG6 1382 aaKnown RBP24.56■■□□□ 1.52
RCC1-211ENST00000478232 FGD5Q6ZNL6 1462 aa24.56■■□□□ 1.52
RCC1-211ENST00000478232 CUX1P39880 1505 aa24.56■■□□□ 1.52
RCC1-211ENST00000478232 FBLN2P98095 1184 aa24.5■■□□□ 1.51
RCC1-211ENST00000478232 WDR97A6NE52 1622 aa24.44■■□□□ 1.5
RCC1-211ENST00000478232 CHMP7Q8WUX9 453 aaPredicted RBP24.38■■□□□ 1.49
RCC1-211ENST00000478232 GRIN2BQ13224 1484 aa24.38■■□□□ 1.49
RCC1-211ENST00000478232 RIMBP3CA6NJZ7 1639 aa24.36■■□□□ 1.49
RCC1-211ENST00000478232 RIMBP3BA6NNM3 1639 aa24.36■■□□□ 1.49
RCC1-211ENST00000478232 RIMBP3Q9UFD9 1639 aa24.36■■□□□ 1.49
RCC1-211ENST00000478232 CHD1O14646 1710 aa24.35■■□□□ 1.49
RCC1-211ENST00000478232 SNAPC4Q5SXM2 1469 aa24.35■■□□□ 1.49
RCC1-211ENST00000478232 ARHGEF11O15085 1522 aa24.35■■□□□ 1.49
RCC1-211ENST00000478232 MAGI1Q96QZ7 1491 aaPredicted RBP24.33■■□□□ 1.49
RCC1-211ENST00000478232 GAPVD1Q14C86 1478 aa24.32■■□□□ 1.48
RCC1-211ENST00000478232 ABCA10Q8WWZ4 1543 aa24.31■■□□□ 1.48
RCC1-211ENST00000478232 WRNQ14191 1432 aaPredicted RBP eCLIP24.31■■□□□ 1.48
RCC1-211ENST00000478232 CYB5RLQ6IPT4 315 aa24.27■■□□□ 1.48
RCC1-211ENST00000478232 SYNJ2O15056 1496 aa24.26■■□□□ 1.47
RCC1-211ENST00000478232 TOP2BQ02880 1626 aa24.22■■□□□ 1.47
RCC1-211ENST00000478232 BIVM-ERCC5R4GMW8 1640 aa24.19■■□□□ 1.46
RCC1-211ENST00000478232 ABCA5Q8WWZ7 1642 aa24.18■■□□□ 1.46
RCC1-211ENST00000478232 SYNJ1O43426 1573 aa24.18■■□□□ 1.46
RCC1-211ENST00000478232 PBRM1Q86U86 1689 aa24.15■■□□□ 1.46
RCC1-211ENST00000478232 CLASP1Q7Z460 1538 aa24.15■■□□□ 1.46
RCC1-211ENST00000478232 ARAP1Q96P48 1450 aa24.11■■□□□ 1.45
RCC1-211ENST00000478232 FHAD1B1AJZ9 1412 aa24.03■■□□□ 1.44
RCC1-211ENST00000478232 GRIN2AQ12879 1464 aa24.03■■□□□ 1.44
RCC1-211ENST00000478232 ERICH3Q5RHP9 1530 aa24.01■■□□□ 1.43
RCC1-211ENST00000478232 ADAMTS12P58397 1594 aa23.98■■□□□ 1.43
RCC1-211ENST00000478232 NUP160Q12769 1436 aa23.95■■□□□ 1.42
RCC1-211ENST00000478232 TRHP20396 242 aaPredicted RBP23.93■■□□□ 1.42
RCC1-211ENST00000478232 CEP170Q5SW79 1584 aa23.89■■□□□ 1.41
RCC1-211ENST00000478232 KIF27Q86VH2 1401 aa23.84■■□□□ 1.41
RCC1-211ENST00000478232 IGF1RP08069 1367 aa23.84■■□□□ 1.41
RCC1-211ENST00000478232 JPH4Q96JJ6 628 aa23.82■■□□□ 1.4
RCC1-211ENST00000478232 ERCC6L2Q5T890 1561 aa23.77■■□□□ 1.4
RCC1-211ENST00000478232 SHROOM2Q13796 1616 aa23.77■■□□□ 1.4
RCC1-211ENST00000478232 PRG4Q92954 1404 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 277.8 ms