RNA–Protein interactions for RNA: ENST00000478216.1

RC3H2-208, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 3

Gene RC3H2, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-208ENST00000478216 NISCHQ9Y2I1 1504 aa35.93■■■■□ 3.34
RC3H2-208ENST00000478216 ABCC9O60706 1549 aa32.83■■■□□ 2.85
RC3H2-208ENST00000478216 CCDC180Q9P1Z9 1646 aa32.44■■■□□ 2.78
RC3H2-208ENST00000478216 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
RC3H2-208ENST00000478216 DNAJC5BQ9UF47 199 aa30.97■■■□□ 2.55
RC3H2-208ENST00000478216 NACADO15069 1562 aa30.74■■■□□ 2.51
RC3H2-208ENST00000478216 DCAF8L2P0C7V8 631 aa30.65■■■□□ 2.5
RC3H2-208ENST00000478216 PABPN1Q86U42 306 aaKnown RBP eCLIP30.5■■■□□ 2.47
RC3H2-208ENST00000478216 UNC13AQ9UPW8 1703 aa30.32■■■□□ 2.44
RC3H2-208ENST00000478216 MYO15BQ96JP2 1530 aa30.11■■■□□ 2.41
RC3H2-208ENST00000478216 BICRAQ9NZM4 1560 aa30.09■■■□□ 2.41
RC3H2-208ENST00000478216 ZCCHC6Q5VYS8 1495 aaKnown RBP29.71■■■□□ 2.35
RC3H2-208ENST00000478216 SHROOM4Q9ULL8 1493 aa29.68■■■□□ 2.34
RC3H2-208ENST00000478216 DCAF1Q9Y4B6 1507 aa29.61■■■□□ 2.33
RC3H2-208ENST00000478216 SCRIBQ14160 1630 aa29.61■■■□□ 2.33
RC3H2-208ENST00000478216 CC2D2AQ9P2K1 1620 aa29.6■■■□□ 2.33
RC3H2-208ENST00000478216 CECR2Q9BXF3 1484 aa29.6■■■□□ 2.33
RC3H2-208ENST00000478216 EIF4G1Q04637 1599 aaKnown RBP29.44■■■□□ 2.3
RC3H2-208ENST00000478216 DNAJC5Q9H3Z4 198 aa28.73■■■□□ 2.19
RC3H2-208ENST00000478216 ERCC6Q03468 1493 aa28.45■■■□□ 2.14
RC3H2-208ENST00000478216 CUX2O14529 1486 aa28.4■■■□□ 2.14
RC3H2-208ENST00000478216 NCAPD3P42695 1498 aa28.33■■■□□ 2.13
RC3H2-208ENST00000478216 ATAD2BQ9ULI0 1458 aa28.22■■■□□ 2.11
RC3H2-208ENST00000478216 SMARCA2P51531 1590 aa28.18■■■□□ 2.1
RC3H2-208ENST00000478216 SMARCA4P51532 1647 aa28.14■■■□□ 2.1
RC3H2-208ENST00000478216 HMGXB3Q12766 1538 aa28.13■■■□□ 2.09
RC3H2-208ENST00000478216 NESP48681 1621 aa28.07■■■□□ 2.08
RC3H2-208ENST00000478216 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
RC3H2-208ENST00000478216 BAZ1AQ9NRL2 1556 aaPredicted RBP27.96■■■□□ 2.07
RC3H2-208ENST00000478216 THOC2Q8NI27 1593 aaKnown RBP27.85■■■□□ 2.05
RC3H2-208ENST00000478216 LAMC3Q9Y6N6 1575 aa27.82■■■□□ 2.04
RC3H2-208ENST00000478216 PEG3Q9GZU2 1588 aa27.8■■■□□ 2.04
RC3H2-208ENST00000478216 KIF21AQ7Z4S6 1674 aa27.72■■■□□ 2.03
RC3H2-208ENST00000478216 MROH2BQ7Z745 1585 aa27.69■■■□□ 2.02
RC3H2-208ENST00000478216 PDS5BQ9NTI5 1447 aa27.68■■■□□ 2.02
RC3H2-208ENST00000478216 TRIM41Q8WV44 630 aa27.51■■□□□ 1.99
RC3H2-208ENST00000478216 CADPSQ9ULU8 1353 aa27.48■■□□□ 1.99
RC3H2-208ENST00000478216 MRC2Q9UBG0 1479 aa27.48■■□□□ 1.99
RC3H2-208ENST00000478216 WDR62O43379 1518 aa27.39■■□□□ 1.98
RC3H2-208ENST00000478216 WIZO95785 1651 aa27.38■■□□□ 1.97
RC3H2-208ENST00000478216 CEP164Q9UPV0 1460 aa27.32■■□□□ 1.96
RC3H2-208ENST00000478216 FANCD2Q9BXW9 1451 aa27.23■■□□□ 1.95
RC3H2-208ENST00000478216 CFTRP13569 1480 aa27.08■■□□□ 1.93
RC3H2-208ENST00000478216 OSCARQ8IYS5 282 aa27.06■■□□□ 1.92
RC3H2-208ENST00000478216 TOP2AP11388 1531 aaKnown RBP27.01■■□□□ 1.91
RC3H2-208ENST00000478216 URB2Q14146 1524 aaKnown RBP27■■□□□ 1.91
RC3H2-208ENST00000478216 RSF1Q96T23 1441 aaPredicted RBP26.98■■□□□ 1.91
RC3H2-208ENST00000478216 PRDM2Q13029 1718 aa26.85■■□□□ 1.89
RC3H2-208ENST00000478216 RIMBP3CA6NJZ7 1639 aa26.76■■□□□ 1.87
RC3H2-208ENST00000478216 RIMBP3BA6NNM3 1639 aa26.76■■□□□ 1.87
RC3H2-208ENST00000478216 RIMBP3Q9UFD9 1639 aa26.76■■□□□ 1.87
RC3H2-208ENST00000478216 IFT140Q96RY7 1462 aa26.75■■□□□ 1.87
RC3H2-208ENST00000478216 ZNF608Q9ULD9 1512 aaPredicted RBP26.73■■□□□ 1.87
RC3H2-208ENST00000478216 CCDC88BA6NC98 1476 aa26.68■■□□□ 1.86
RC3H2-208ENST00000478216 TOPBP1Q92547 1522 aa26.65■■□□□ 1.86
RC3H2-208ENST00000478216 ARHGEF11O15085 1522 aa26.64■■□□□ 1.85
RC3H2-208ENST00000478216 EIF4G3O43432 1585 aaKnown RBP26.61■■□□□ 1.85
RC3H2-208ENST00000478216 ABCC8Q09428 1581 aa26.57■■□□□ 1.84
RC3H2-208ENST00000478216 DNMBPQ6XZF7 1577 aa26.54■■□□□ 1.84
RC3H2-208ENST00000478216 CYB5RLQ6IPT4 315 aa26.49■■□□□ 1.83
RC3H2-208ENST00000478216 CHD1O14646 1710 aa26.48■■□□□ 1.83
RC3H2-208ENST00000478216 FBLN2P98095 1184 aa26.47■■□□□ 1.83
RC3H2-208ENST00000478216 AQRO60306 1485 aaKnown RBP eCLIP26.45■■□□□ 1.822e-6■■■■■ 34.3
RC3H2-208ENST00000478216 TARBP1Q13395 1621 aaKnown RBP26.41■■□□□ 1.82
RC3H2-208ENST00000478216 TRHP20396 242 aaPredicted RBP26.39■■□□□ 1.82
RC3H2-208ENST00000478216 POLA1P09884 1462 aaPredicted RBP26.36■■□□□ 1.81
RC3H2-208ENST00000478216 ARAP1Q96P48 1450 aa26.33■■□□□ 1.81
RC3H2-208ENST00000478216 RAD54L2Q9Y4B4 1467 aa26.28■■□□□ 1.8
RC3H2-208ENST00000478216 SOGA1O94964 1423 aa26.24■■□□□ 1.79
RC3H2-208ENST00000478216 TDRD9Q8NDG6 1382 aaKnown RBP26.24■■□□□ 1.79
RC3H2-208ENST00000478216 SNAPC4Q5SXM2 1469 aa26.21■■□□□ 1.79
RC3H2-208ENST00000478216 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
RC3H2-208ENST00000478216 CHMP7Q8WUX9 453 aaPredicted RBP26.16■■□□□ 1.78
RC3H2-208ENST00000478216 SYNJ1O43426 1573 aa26.14■■□□□ 1.78
RC3H2-208ENST00000478216 WDR97A6NE52 1622 aa26.14■■□□□ 1.77
RC3H2-208ENST00000478216 CLASP1Q7Z460 1538 aa26.1■■□□□ 1.77
RC3H2-208ENST00000478216 MAGI1Q96QZ7 1491 aaPredicted RBP26.1■■□□□ 1.77
RC3H2-208ENST00000478216 GRIN2BQ13224 1484 aa26.07■■□□□ 1.76
RC3H2-208ENST00000478216 CUX1P39880 1505 aa26.05■■□□□ 1.76
RC3H2-208ENST00000478216 SYNJ2O15056 1496 aa26.02■■□□□ 1.76
RC3H2-208ENST00000478216 PBRM1Q86U86 1689 aa25.96■■□□□ 1.75
RC3H2-208ENST00000478216 GAPVD1Q14C86 1478 aa25.92■■□□□ 1.74
RC3H2-208ENST00000478216 AEBP2Q6ZN18 517 aaPredicted RBP25.92■■□□□ 1.74
RC3H2-208ENST00000478216 ABCA5Q8WWZ7 1642 aa25.82■■□□□ 1.72
RC3H2-208ENST00000478216 ABCA10Q8WWZ4 1543 aa25.81■■□□□ 1.72
RC3H2-208ENST00000478216 GRIN2AQ12879 1464 aa25.72■■□□□ 1.71
RC3H2-208ENST00000478216 ADAMTS12P58397 1594 aa25.69■■□□□ 1.7
RC3H2-208ENST00000478216 ERCC6L2Q5T890 1561 aa25.69■■□□□ 1.7
RC3H2-208ENST00000478216 WRNQ14191 1432 aaPredicted RBP eCLIP25.68■■□□□ 1.7
RC3H2-208ENST00000478216 SUPT5HO00267 1087 aaKnown RBP25.66■■□□□ 1.7
RC3H2-208ENST00000478216 CEP170Q5SW79 1584 aa25.65■■□□□ 1.7
RC3H2-208ENST00000478216 NUP160Q12769 1436 aa25.6■■□□□ 1.69
RC3H2-208ENST00000478216 FHAD1B1AJZ9 1412 aa25.57■■□□□ 1.68
RC3H2-208ENST00000478216 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
RC3H2-208ENST00000478216 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
RC3H2-208ENST00000478216 SHROOM2Q13796 1616 aa25.54■■□□□ 1.68
RC3H2-208ENST00000478216 ERICH3Q5RHP9 1530 aa25.49■■□□□ 1.67
RC3H2-208ENST00000478216 PRG4Q92954 1404 aaPredicted RBP25.46■■□□□ 1.67
RC3H2-208ENST00000478216 KIF13AQ9H1H9 1805 aa25.4■■□□□ 1.66
RC3H2-208ENST00000478216 JPH4Q96JJ6 628 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 349.7 ms