RNA–Protein interactions for RNA: ENST00000477989.1

PPP2R1A-209, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

TSL 3 BASIC

Gene PPP2R1A, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-209ENST00000477989 NISCHQ9Y2I1 1504 aa35.22■■■■□ 3.23
PPP2R1A-209ENST00000477989 ABCC9O60706 1549 aa31.65■■■□□ 2.66
PPP2R1A-209ENST00000477989 CCDC180Q9P1Z9 1646 aa31.57■■■□□ 2.64
PPP2R1A-209ENST00000477989 RB1CC1Q8TDY2 1594 aa30.12■■■□□ 2.41
PPP2R1A-209ENST00000477989 NACADO15069 1562 aa29.9■■■□□ 2.38
PPP2R1A-209ENST00000477989 DCAF8L2P0C7V8 631 aa29.89■■■□□ 2.38
PPP2R1A-209ENST00000477989 DNAJC5BQ9UF47 199 aa29.66■■■□□ 2.34
PPP2R1A-209ENST00000477989 PABPN1Q86U42 306 aaKnown RBP eCLIP29.5■■■□□ 2.31
PPP2R1A-209ENST00000477989 MYO15BQ96JP2 1530 aa29.45■■■□□ 2.31
PPP2R1A-209ENST00000477989 UNC13AQ9UPW8 1703 aa29.34■■■□□ 2.29
PPP2R1A-209ENST00000477989 ZCCHC6Q5VYS8 1495 aaKnown RBP29.16■■■□□ 2.26
PPP2R1A-209ENST00000477989 BICRAQ9NZM4 1560 aa29.15■■■□□ 2.26
PPP2R1A-209ENST00000477989 DCAF1Q9Y4B6 1507 aa29.07■■■□□ 2.24
PPP2R1A-209ENST00000477989 SHROOM4Q9ULL8 1493 aa28.82■■■□□ 2.2
PPP2R1A-209ENST00000477989 SCRIBQ14160 1630 aa28.8■■■□□ 2.2
PPP2R1A-209ENST00000477989 CC2D2AQ9P2K1 1620 aa28.55■■■□□ 2.16
PPP2R1A-209ENST00000477989 CECR2Q9BXF3 1484 aa28.52■■■□□ 2.16
PPP2R1A-209ENST00000477989 EIF4G1Q04637 1599 aaKnown RBP28.49■■■□□ 2.15
PPP2R1A-209ENST00000477989 NCAPD3P42695 1498 aa27.59■■■□□ 2.01
PPP2R1A-209ENST00000477989 ATAD2BQ9ULI0 1458 aa27.51■■■□□ 2
PPP2R1A-209ENST00000477989 SMARCA4P51532 1647 aa27.45■■□□□ 1.99
PPP2R1A-209ENST00000477989 SMARCA2P51531 1590 aa27.45■■□□□ 1.99
PPP2R1A-209ENST00000477989 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
PPP2R1A-209ENST00000477989 HMGXB3Q12766 1538 aa27.37■■□□□ 1.97
PPP2R1A-209ENST00000477989 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
PPP2R1A-209ENST00000477989 DNAJC5Q9H3Z4 198 aa27.29■■□□□ 1.96
PPP2R1A-209ENST00000477989 CUX2O14529 1486 aa27.28■■□□□ 1.96
PPP2R1A-209ENST00000477989 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
PPP2R1A-209ENST00000477989 PEG3Q9GZU2 1588 aa27.17■■□□□ 1.94
PPP2R1A-209ENST00000477989 NESP48681 1621 aa27.15■■□□□ 1.94
PPP2R1A-209ENST00000477989 MROH2BQ7Z745 1585 aa27.12■■□□□ 1.93
PPP2R1A-209ENST00000477989 LAMC3Q9Y6N6 1575 aa26.97■■□□□ 1.91
PPP2R1A-209ENST00000477989 PDS5BQ9NTI5 1447 aa26.88■■□□□ 1.89
PPP2R1A-209ENST00000477989 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
PPP2R1A-209ENST00000477989 WIZO95785 1651 aa26.79■■□□□ 1.88
PPP2R1A-209ENST00000477989 CADPSQ9ULU8 1353 aa26.79■■□□□ 1.88
PPP2R1A-209ENST00000477989 KIF21AQ7Z4S6 1674 aa26.78■■□□□ 1.88
PPP2R1A-209ENST00000477989 MRC2Q9UBG0 1479 aa26.61■■□□□ 1.85
PPP2R1A-209ENST00000477989 RSF1Q96T23 1441 aaPredicted RBP26.57■■□□□ 1.84
PPP2R1A-209ENST00000477989 CEP164Q9UPV0 1460 aa26.51■■□□□ 1.83
PPP2R1A-209ENST00000477989 WDR62O43379 1518 aa26.5■■□□□ 1.83
PPP2R1A-209ENST00000477989 FANCD2Q9BXW9 1451 aa26.48■■□□□ 1.83
PPP2R1A-209ENST00000477989 TOP2AP11388 1531 aaKnown RBP26.47■■□□□ 1.83
PPP2R1A-209ENST00000477989 CFTRP13569 1480 aa26.45■■□□□ 1.82
PPP2R1A-209ENST00000477989 URB2Q14146 1524 aaKnown RBP26.22■■□□□ 1.79
PPP2R1A-209ENST00000477989 CCDC88BA6NC98 1476 aa26.19■■□□□ 1.78
PPP2R1A-209ENST00000477989 TRIM41Q8WV44 630 aa26.16■■□□□ 1.78
PPP2R1A-209ENST00000477989 PRDM2Q13029 1718 aa26.14■■□□□ 1.77
PPP2R1A-209ENST00000477989 OSCARQ8IYS5 282 aa26.1■■□□□ 1.77
PPP2R1A-209ENST00000477989 IFT140Q96RY7 1462 aa25.98■■□□□ 1.75
PPP2R1A-209ENST00000477989 TOPBP1Q92547 1522 aa25.95■■□□□ 1.74
PPP2R1A-209ENST00000477989 ABCC8Q09428 1581 aa25.95■■□□□ 1.74
PPP2R1A-209ENST00000477989 ZNF608Q9ULD9 1512 aaPredicted RBP25.9■■□□□ 1.74
PPP2R1A-209ENST00000477989 DNMBPQ6XZF7 1577 aa25.86■■□□□ 1.73
PPP2R1A-209ENST00000477989 EIF4G3O43432 1585 aaKnown RBP25.75■■□□□ 1.71
PPP2R1A-209ENST00000477989 AQRO60306 1485 aaKnown RBP eCLIP25.71■■□□□ 1.711e-6■□□□□ 9.4
PPP2R1A-209ENST00000477989 TARBP1Q13395 1621 aaKnown RBP25.69■■□□□ 1.7
PPP2R1A-209ENST00000477989 POLA1P09884 1462 aaPredicted RBP25.68■■□□□ 1.7
PPP2R1A-209ENST00000477989 RIMBP3CA6NJZ7 1639 aa25.66■■□□□ 1.7
PPP2R1A-209ENST00000477989 RIMBP3BA6NNM3 1639 aa25.66■■□□□ 1.7
PPP2R1A-209ENST00000477989 RIMBP3Q9UFD9 1639 aa25.66■■□□□ 1.7
PPP2R1A-209ENST00000477989 FBLN2P98095 1184 aa25.64■■□□□ 1.7
PPP2R1A-209ENST00000477989 SOGA1O94964 1423 aa25.63■■□□□ 1.69
PPP2R1A-209ENST00000477989 RAD54L2Q9Y4B4 1467 aa25.6■■□□□ 1.69
PPP2R1A-209ENST00000477989 ARHGEF11O15085 1522 aa25.6■■□□□ 1.69
PPP2R1A-209ENST00000477989 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
PPP2R1A-209ENST00000477989 CHD1O14646 1710 aa25.55■■□□□ 1.68
PPP2R1A-209ENST00000477989 FGD5Q6ZNL6 1462 aa25.53■■□□□ 1.68
PPP2R1A-209ENST00000477989 SUPT5HO00267 1087 aaKnown RBP25.51■■□□□ 1.67
PPP2R1A-209ENST00000477989 CYB5RLQ6IPT4 315 aa25.5■■□□□ 1.67
PPP2R1A-209ENST00000477989 CUX1P39880 1505 aa25.48■■□□□ 1.67
PPP2R1A-209ENST00000477989 WDR97A6NE52 1622 aa25.45■■□□□ 1.67
PPP2R1A-209ENST00000477989 SNAPC4Q5SXM2 1469 aa25.43■■□□□ 1.66
PPP2R1A-209ENST00000477989 CHMP7Q8WUX9 453 aaPredicted RBP25.43■■□□□ 1.66
PPP2R1A-209ENST00000477989 GRIN2BQ13224 1484 aa25.38■■□□□ 1.65
PPP2R1A-209ENST00000477989 MAGI1Q96QZ7 1491 aaPredicted RBP25.37■■□□□ 1.65
PPP2R1A-209ENST00000477989 ARAP1Q96P48 1450 aa25.33■■□□□ 1.65
PPP2R1A-209ENST00000477989 SYNJ1O43426 1573 aa25.31■■□□□ 1.64
PPP2R1A-209ENST00000477989 GAPVD1Q14C86 1478 aa25.29■■□□□ 1.64
PPP2R1A-209ENST00000477989 SYNJ2O15056 1496 aa25.28■■□□□ 1.64
PPP2R1A-209ENST00000477989 TRHP20396 242 aaPredicted RBP25.26■■□□□ 1.63
PPP2R1A-209ENST00000477989 CLASP1Q7Z460 1538 aa25.25■■□□□ 1.63
PPP2R1A-209ENST00000477989 ABCA10Q8WWZ4 1543 aa25.24■■□□□ 1.63
PPP2R1A-209ENST00000477989 PBRM1Q86U86 1689 aa25.23■■□□□ 1.63
PPP2R1A-209ENST00000477989 WRNQ14191 1432 aaPredicted RBP eCLIP25.19■■□□□ 1.62
PPP2R1A-209ENST00000477989 ABCA5Q8WWZ7 1642 aa25.16■■□□□ 1.62
PPP2R1A-209ENST00000477989 TOP2BQ02880 1626 aa25.08■■□□□ 1.6
PPP2R1A-209ENST00000477989 BIVM-ERCC5R4GMW8 1640 aa25.06■■□□□ 1.6
PPP2R1A-209ENST00000477989 GRIN2AQ12879 1464 aa25.03■■□□□ 1.6
PPP2R1A-209ENST00000477989 ADAMTS12P58397 1594 aa24.99■■□□□ 1.59
PPP2R1A-209ENST00000477989 FHAD1B1AJZ9 1412 aa24.97■■□□□ 1.59
PPP2R1A-209ENST00000477989 NUP160Q12769 1436 aa24.94■■□□□ 1.58
PPP2R1A-209ENST00000477989 ERICH3Q5RHP9 1530 aa24.92■■□□□ 1.58
PPP2R1A-209ENST00000477989 CEP170Q5SW79 1584 aa24.91■■□□□ 1.58
PPP2R1A-209ENST00000477989 ERCC6L2Q5T890 1561 aa24.86■■□□□ 1.57
PPP2R1A-209ENST00000477989 SHROOM2Q13796 1616 aa24.79■■□□□ 1.56
PPP2R1A-209ENST00000477989 JPH4Q96JJ6 628 aa24.75■■□□□ 1.55
PPP2R1A-209ENST00000477989 PRG4Q92954 1404 aaPredicted RBP24.75■■□□□ 1.55
PPP2R1A-209ENST00000477989 KIF27Q86VH2 1401 aa24.66■■□□□ 1.54
PPP2R1A-209ENST00000477989 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms