RNA–Protein interactions for RNA: ENST00000477980.6

ARMCX3-204, Transcript of armadillo repeat containing X-linked 3, humanhuman

TSL 3

Gene ARMCX3, Length 833 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARMCX3-204ENST00000477980 NISCHQ9Y2I1 1504 aa42.91■■■■■ 4.46
ARMCX3-204ENST00000477980 CCDC180Q9P1Z9 1646 aa38.32■■■■□ 3.73
ARMCX3-204ENST00000477980 ABCC9O60706 1549 aa37.99■■■■□ 3.67
ARMCX3-204ENST00000477980 RB1CC1Q8TDY2 1594 aa36.33■■■■□ 3.41
ARMCX3-204ENST00000477980 NACADO15069 1562 aa36.19■■■■□ 3.38
ARMCX3-204ENST00000477980 DCAF8L2P0C7V8 631 aa36.11■■■■□ 3.37
ARMCX3-204ENST00000477980 MYO15BQ96JP2 1530 aa35.81■■■■□ 3.32
ARMCX3-204ENST00000477980 ZCCHC6Q5VYS8 1495 aaKnown RBP35.62■■■■□ 3.29
ARMCX3-204ENST00000477980 DCAF1Q9Y4B6 1507 aa35.48■■■■□ 3.27
ARMCX3-204ENST00000477980 PABPN1Q86U42 306 aaKnown RBP eCLIP35.45■■■■□ 3.27
ARMCX3-204ENST00000477980 UNC13AQ9UPW8 1703 aa35.43■■■■□ 3.26
ARMCX3-204ENST00000477980 DNAJC5BQ9UF47 199 aa35.33■■■■□ 3.25
ARMCX3-204ENST00000477980 BICRAQ9NZM4 1560 aa35.22■■■■□ 3.23
ARMCX3-204ENST00000477980 SCRIBQ14160 1630 aa34.93■■■■□ 3.18
ARMCX3-204ENST00000477980 SHROOM4Q9ULL8 1493 aa34.84■■■■□ 3.17
ARMCX3-204ENST00000477980 EIF4G1Q04637 1599 aaKnown RBP34.35■■■■□ 3.09
ARMCX3-204ENST00000477980 CC2D2AQ9P2K1 1620 aa34.33■■■■□ 3.09
ARMCX3-204ENST00000477980 CECR2Q9BXF3 1484 aa34.2■■■■□ 3.07
ARMCX3-204ENST00000477980 NCAPD3P42695 1498 aa33.41■■■□□ 2.94
ARMCX3-204ENST00000477980 SMARCA4P51532 1647 aa33.37■■■□□ 2.93
ARMCX3-204ENST00000477980 ATAD2BQ9ULI0 1458 aa33.34■■■□□ 2.93
ARMCX3-204ENST00000477980 BAZ1AQ9NRL2 1556 aaPredicted RBP33.29■■■□□ 2.92
ARMCX3-204ENST00000477980 SMARCA2P51531 1590 aa33.28■■■□□ 2.92
ARMCX3-204ENST00000477980 HMGXB3Q12766 1538 aa33.17■■■□□ 2.9
ARMCX3-204ENST00000477980 PEG3Q9GZU2 1588 aa33.06■■■□□ 2.88
ARMCX3-204ENST00000477980 BAZ1BQ9UIG0 1483 aaKnown RBP33.05■■■□□ 2.88
ARMCX3-204ENST00000477980 MROH2BQ7Z745 1585 aa33.04■■■□□ 2.88
ARMCX3-204ENST00000477980 ERCC6Q03468 1493 aa32.81■■■□□ 2.84
ARMCX3-204ENST00000477980 NESP48681 1621 aa32.73■■■□□ 2.83
ARMCX3-204ENST00000477980 WIZO95785 1651 aa32.65■■■□□ 2.82
ARMCX3-204ENST00000477980 CUX2O14529 1486 aa32.62■■■□□ 2.81
ARMCX3-204ENST00000477980 LAMC3Q9Y6N6 1575 aa32.58■■■□□ 2.81
ARMCX3-204ENST00000477980 RSF1Q96T23 1441 aaPredicted RBP32.52■■■□□ 2.8
ARMCX3-204ENST00000477980 CADPSQ9ULU8 1353 aa32.42■■■□□ 2.78
ARMCX3-204ENST00000477980 PDS5BQ9NTI5 1447 aa32.42■■■□□ 2.78
ARMCX3-204ENST00000477980 THOC2Q8NI27 1593 aaKnown RBP32.3■■■□□ 2.76
ARMCX3-204ENST00000477980 TOP2AP11388 1531 aaKnown RBP32.29■■■□□ 2.76
ARMCX3-204ENST00000477980 KIF21AQ7Z4S6 1674 aa32.28■■■□□ 2.76
ARMCX3-204ENST00000477980 DNAJC5Q9H3Z4 198 aa32.22■■■□□ 2.75
ARMCX3-204ENST00000477980 CFTRP13569 1480 aa32.11■■■□□ 2.73
ARMCX3-204ENST00000477980 MRC2Q9UBG0 1479 aa32.08■■■□□ 2.73
ARMCX3-204ENST00000477980 FANCD2Q9BXW9 1451 aa32.03■■■□□ 2.72
ARMCX3-204ENST00000477980 CEP164Q9UPV0 1460 aa32.03■■■□□ 2.72
ARMCX3-204ENST00000477980 WDR62O43379 1518 aa31.97■■■□□ 2.71
ARMCX3-204ENST00000477980 CCDC88BA6NC98 1476 aa31.93■■■□□ 2.7
ARMCX3-204ENST00000477980 PRDM2Q13029 1718 aa31.75■■■□□ 2.67
ARMCX3-204ENST00000477980 URB2Q14146 1524 aaKnown RBP31.72■■■□□ 2.67
ARMCX3-204ENST00000477980 TOPBP1Q92547 1522 aa31.45■■■□□ 2.63
ARMCX3-204ENST00000477980 ABCC8Q09428 1581 aa31.45■■■□□ 2.63
ARMCX3-204ENST00000477980 IFT140Q96RY7 1462 aa31.39■■■□□ 2.62
ARMCX3-204ENST00000477980 SUPT5HO00267 1087 aaKnown RBP31.37■■■□□ 2.61
ARMCX3-204ENST00000477980 DNMBPQ6XZF7 1577 aa31.36■■■□□ 2.61
ARMCX3-204ENST00000477980 ZNF608Q9ULD9 1512 aaPredicted RBP31.27■■■□□ 2.6
ARMCX3-204ENST00000477980 OSCARQ8IYS5 282 aa31.23■■■□□ 2.59
ARMCX3-204ENST00000477980 POLA1P09884 1462 aaPredicted RBP31.15■■■□□ 2.58
ARMCX3-204ENST00000477980 TARBP1Q13395 1621 aaKnown RBP31.13■■■□□ 2.57
ARMCX3-204ENST00000477980 EIF4G3O43432 1585 aaKnown RBP31.1■■■□□ 2.57
ARMCX3-204ENST00000477980 AQRO60306 1485 aaKnown RBP eCLIP31.06■■■□□ 2.567e-9■■■■■ 35.6
ARMCX3-204ENST00000477980 SOGA1O94964 1423 aa31.06■■■□□ 2.56
ARMCX3-204ENST00000477980 CUX1P39880 1505 aa31.03■■■□□ 2.56
ARMCX3-204ENST00000477980 RAD54L2Q9Y4B4 1467 aa31.03■■■□□ 2.56
ARMCX3-204ENST00000477980 FGD5Q6ZNL6 1462 aa31.01■■■□□ 2.55
ARMCX3-204ENST00000477980 TRIM41Q8WV44 630 aa30.94■■■□□ 2.54
ARMCX3-204ENST00000477980 TDRD9Q8NDG6 1382 aaKnown RBP30.93■■■□□ 2.54
ARMCX3-204ENST00000477980 WDR97A6NE52 1622 aa30.87■■■□□ 2.53
ARMCX3-204ENST00000477980 FBLN2P98095 1184 aa30.82■■■□□ 2.52
ARMCX3-204ENST00000477980 CHD1O14646 1710 aa30.78■■■□□ 2.52
ARMCX3-204ENST00000477980 SNAPC4Q5SXM2 1469 aa30.74■■■□□ 2.51
ARMCX3-204ENST00000477980 GRIN2BQ13224 1484 aa30.73■■■□□ 2.51
ARMCX3-204ENST00000477980 RIMBP3CA6NJZ7 1639 aa30.7■■■□□ 2.51
ARMCX3-204ENST00000477980 RIMBP3BA6NNM3 1639 aa30.7■■■□□ 2.51
ARMCX3-204ENST00000477980 RIMBP3Q9UFD9 1639 aa30.7■■■□□ 2.51
ARMCX3-204ENST00000477980 MAGI1Q96QZ7 1491 aaPredicted RBP30.7■■■□□ 2.5
ARMCX3-204ENST00000477980 ABCA10Q8WWZ4 1543 aa30.69■■■□□ 2.5
ARMCX3-204ENST00000477980 WRNQ14191 1432 aaPredicted RBP eCLIP30.68■■■□□ 2.5
ARMCX3-204ENST00000477980 GAPVD1Q14C86 1478 aa30.67■■■□□ 2.5
ARMCX3-204ENST00000477980 ARHGEF11O15085 1522 aa30.67■■■□□ 2.5
ARMCX3-204ENST00000477980 CHMP7Q8WUX9 453 aaPredicted RBP30.66■■■□□ 2.5
ARMCX3-204ENST00000477980 TOP2BQ02880 1626 aa30.64■■■□□ 2.5
ARMCX3-204ENST00000477980 BIVM-ERCC5R4GMW8 1640 aa30.62■■■□□ 2.49
ARMCX3-204ENST00000477980 SYNJ1O43426 1573 aa30.59■■■□□ 2.49
ARMCX3-204ENST00000477980 SYNJ2O15056 1496 aa30.59■■■□□ 2.49
ARMCX3-204ENST00000477980 ABCA5Q8WWZ7 1642 aa30.58■■■□□ 2.49
ARMCX3-204ENST00000477980 PBRM1Q86U86 1689 aa30.57■■■□□ 2.48
ARMCX3-204ENST00000477980 CLASP1Q7Z460 1538 aa30.47■■■□□ 2.47
ARMCX3-204ENST00000477980 CYB5RLQ6IPT4 315 aa30.47■■■□□ 2.47
ARMCX3-204ENST00000477980 ARAP1Q96P48 1450 aa30.38■■■□□ 2.45
ARMCX3-204ENST00000477980 ADAMTS12P58397 1594 aa30.32■■■□□ 2.45
ARMCX3-204ENST00000477980 GRIN2AQ12879 1464 aa30.32■■■□□ 2.44
ARMCX3-204ENST00000477980 ERICH3Q5RHP9 1530 aa30.32■■■□□ 2.44
ARMCX3-204ENST00000477980 FHAD1B1AJZ9 1412 aa30.3■■■□□ 2.44
ARMCX3-204ENST00000477980 NUP160Q12769 1436 aa30.21■■■□□ 2.43
ARMCX3-204ENST00000477980 CEP170Q5SW79 1584 aa30.17■■■□□ 2.42
ARMCX3-204ENST00000477980 KIF27Q86VH2 1401 aa30.09■■■□□ 2.41
ARMCX3-204ENST00000477980 IGF1RP08069 1367 aa30.03■■■□□ 2.4
ARMCX3-204ENST00000477980 TRHP20396 242 aaPredicted RBP30.01■■■□□ 2.39
ARMCX3-204ENST00000477980 SHROOM2Q13796 1616 aa30■■■□□ 2.39
ARMCX3-204ENST00000477980 ERCC6L2Q5T890 1561 aa30■■■□□ 2.39
ARMCX3-204ENST00000477980 JPH4Q96JJ6 628 aa29.94■■■□□ 2.38
ARMCX3-204ENST00000477980 CUL7Q14999 1698 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms