RNA–Protein interactions for RNA: ENST00000477925.5

SRPK2-210, Transcript of SRSF protein kinase 2, humanhuman

TSL 5

Gene SRPK2, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK2-210ENST00000477925 AEBP2Q6ZN18 517 aaPredicted RBP23.71■■□□□ 1.39
SRPK2-210ENST00000477925 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
SRPK2-210ENST00000477925 SENP3Q9H4L4 574 aaPredicted RBP20.21■□□□□ 0.83
SRPK2-210ENST00000477925 PHF23Q9BUL5 403 aaPredicted RBP19.95■□□□□ 0.78
SRPK2-210ENST00000477925 FOXD1Q16676 465 aa18.87■□□□□ 0.61
SRPK2-210ENST00000477925 NISCHQ9Y2I1 1504 aa18.87■□□□□ 0.61
SRPK2-210ENST00000477925 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
SRPK2-210ENST00000477925 MSH5O43196 834 aa17.68■□□□□ 0.42
SRPK2-210ENST00000477925 PIAS4Q8N2W9 510 aaPredicted RBP17.59■□□□□ 0.41
SRPK2-210ENST00000477925 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
SRPK2-210ENST00000477925 ADRA2BP18089 450 aa17.5■□□□□ 0.39
SRPK2-210ENST00000477925 POTEDQ86YR6 584 aa17.5■□□□□ 0.39
SRPK2-210ENST00000477925 CCDC180Q9P1Z9 1646 aa16.76■□□□□ 0.27
SRPK2-210ENST00000477925 ABCC9O60706 1549 aa16.48■□□□□ 0.23
SRPK2-210ENST00000477925 MAPK8IP2Q13387 824 aaPredicted RBP16.13■□□□□ 0.17
SRPK2-210ENST00000477925 DMRT2Q9Y5R5 561 aa16■□□□□ 0.15
SRPK2-210ENST00000477925 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
SRPK2-210ENST00000477925 RB1CC1Q8TDY2 1594 aa15.78■□□□□ 0.12
SRPK2-210ENST00000477925 DCAF8L2P0C7V8 631 aa15.76■□□□□ 0.11
SRPK2-210ENST00000477925 NACADO15069 1562 aa15.74■□□□□ 0.11
SRPK2-210ENST00000477925 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
SRPK2-210ENST00000477925 ZCCHC6Q5VYS8 1495 aaKnown RBP15.73■□□□□ 0.11
SRPK2-210ENST00000477925 MYO15BQ96JP2 1530 aa15.62■□□□□ 0.09
SRPK2-210ENST00000477925 PPP4R3CPQ6ZMV5 832 aa15.6■□□□□ 0.09
SRPK2-210ENST00000477925 DCAF1Q9Y4B6 1507 aa15.56■□□□□ 0.08
SRPK2-210ENST00000477925 UNC13AQ9UPW8 1703 aa15.49■□□□□ 0.07
SRPK2-210ENST00000477925 DNAJC5Q9H3Z4 198 aa15.41■□□□□ 0.06
SRPK2-210ENST00000477925 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
SRPK2-210ENST00000477925 DCAF8L1A6NGE4 600 aa15.38■□□□□ 0.05
SRPK2-210ENST00000477925 SCRIBQ14160 1630 aa15.37■□□□□ 0.05
SRPK2-210ENST00000477925 BICRAQ9NZM4 1560 aa15.37■□□□□ 0.05
SRPK2-210ENST00000477925 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
SRPK2-210ENST00000477925 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
SRPK2-210ENST00000477925 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.04
SRPK2-210ENST00000477925 RNF216Q9NWF9 866 aaPredicted RBP15.21■□□□□ 0.03
SRPK2-210ENST00000477925 RNF39Q9H2S5 420 aa15.1■□□□□ 0.01
SRPK2-210ENST00000477925 SHROOM4Q9ULL8 1493 aa15.1■□□□□ 0.01
SRPK2-210ENST00000477925 NCBP3Q53F19 620 aaKnown RBP14.94□□□□□ -0.02
SRPK2-210ENST00000477925 EIF4G1Q04637 1599 aaKnown RBP14.94□□□□□ -0.02
SRPK2-210ENST00000477925 CC2D2AQ9P2K1 1620 aa14.9□□□□□ -0.02
SRPK2-210ENST00000477925 C1QBPQ07021 282 aaKnown RBP14.84□□□□□ -0.03
SRPK2-210ENST00000477925 CECR2Q9BXF3 1484 aa14.78□□□□□ -0.04
SRPK2-210ENST00000477925 NPM3O75607 178 aaKnown RBP14.74□□□□□ -0.05
SRPK2-210ENST00000477925 SMARCA4P51532 1647 aa14.66□□□□□ -0.06
SRPK2-210ENST00000477925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.061e-7■■□□□ 12.1
SRPK2-210ENST00000477925 BAZ1AQ9NRL2 1556 aaPredicted RBP14.6□□□□□ -0.07
SRPK2-210ENST00000477925 MROH2BQ7Z745 1585 aa14.57□□□□□ -0.08
SRPK2-210ENST00000477925 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
SRPK2-210ENST00000477925 NCAPD3P42695 1498 aa14.53□□□□□ -0.08
SRPK2-210ENST00000477925 SMARCA2P51531 1590 aa14.51□□□□□ -0.09
SRPK2-210ENST00000477925 HMGXB3Q12766 1538 aa14.48□□□□□ -0.09
SRPK2-210ENST00000477925 PEG3Q9GZU2 1588 aa14.48□□□□□ -0.09
SRPK2-210ENST00000477925 BAZ1BQ9UIG0 1483 aaKnown RBP14.45□□□□□ -0.1
SRPK2-210ENST00000477925 WIZO95785 1651 aa14.43□□□□□ -0.1
SRPK2-210ENST00000477925 RSF1Q96T23 1441 aaPredicted RBP14.38□□□□□ -0.11
SRPK2-210ENST00000477925 KCNA4P22459 653 aa14.37□□□□□ -0.11
SRPK2-210ENST00000477925 U3KPZ7 1027 aaPredicted RBP14.34□□□□□ -0.11
SRPK2-210ENST00000477925 NESP48681 1621 aa14.28□□□□□ -0.12
SRPK2-210ENST00000477925 TOP2AP11388 1531 aaKnown RBP14.24□□□□□ -0.13
SRPK2-210ENST00000477925 TRIM41Q8WV44 630 aa14.19□□□□□ -0.14
SRPK2-210ENST00000477925 SPINK5Q9NQ38 1064 aaPredicted RBP14.18□□□□□ -0.14
SRPK2-210ENST00000477925 ERCC6Q03468 1493 aa14.17□□□□□ -0.14
SRPK2-210ENST00000477925 LAMC3Q9Y6N6 1575 aa14.15□□□□□ -0.14
SRPK2-210ENST00000477925 CAPN15O75808 1086 aa14.15□□□□□ -0.15
SRPK2-210ENST00000477925 SLC4A2P04920 1241 aa14.14□□□□□ -0.15
SRPK2-210ENST00000477925 CADPSQ9ULU8 1353 aa14.12□□□□□ -0.15
SRPK2-210ENST00000477925 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
SRPK2-210ENST00000477925 DSG3P32926 999 aa14.09□□□□□ -0.15
SRPK2-210ENST00000477925 CCDC88BA6NC98 1476 aa14.07□□□□□ -0.16
SRPK2-210ENST00000477925 THOC2Q8NI27 1593 aaKnown RBP14.05□□□□□ -0.16
SRPK2-210ENST00000477925 CFTRP13569 1480 aa14.04□□□□□ -0.16
SRPK2-210ENST00000477925 PDS5BQ9NTI5 1447 aa14.03□□□□□ -0.16
SRPK2-210ENST00000477925 SUPT5HO00267 1087 aaKnown RBP14□□□□□ -0.17
SRPK2-210ENST00000477925 CUX2O14529 1486 aa14□□□□□ -0.17
SRPK2-210ENST00000477925 FANCD2Q9BXW9 1451 aa13.98□□□□□ -0.17
SRPK2-210ENST00000477925 CEP164Q9UPV0 1460 aa13.96□□□□□ -0.18
SRPK2-210ENST00000477925 MRC2Q9UBG0 1479 aa13.95□□□□□ -0.18
SRPK2-210ENST00000477925 PRDM2Q13029 1718 aa13.94□□□□□ -0.18
SRPK2-210ENST00000477925 WDR62O43379 1518 aa13.91□□□□□ -0.18
SRPK2-210ENST00000477925 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.19
SRPK2-210ENST00000477925 APLP2Q06481 763 aa13.88□□□□□ -0.19
SRPK2-210ENST00000477925 URB2Q14146 1524 aaKnown RBP13.87□□□□□ -0.19
SRPK2-210ENST00000477925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.85□□□□□ -0.19
SRPK2-210ENST00000477925 HNRNPUL2Q1KMD3 747 aaKnown RBP13.85□□□□□ -0.19
SRPK2-210ENST00000477925 ZNF219Q9P2Y4 722 aaPredicted RBP13.84□□□□□ -0.19
SRPK2-210ENST00000477925 ABCB7O75027 752 aa13.82□□□□□ -0.2
SRPK2-210ENST00000477925 SAMD1Q6SPF0 538 aaPredicted RBP13.77□□□□□ -0.21
SRPK2-210ENST00000477925 TOPBP1Q92547 1522 aa13.77□□□□□ -0.21
SRPK2-210ENST00000477925 DNMBPQ6XZF7 1577 aa13.74□□□□□ -0.21
SRPK2-210ENST00000477925 POTEHQ6S545 545 aa13.68□□□□□ -0.22
SRPK2-210ENST00000477925 CUX1P39880 1505 aa13.68□□□□□ -0.22
SRPK2-210ENST00000477925 ABCC8Q09428 1581 aa13.67□□□□□ -0.22
SRPK2-210ENST00000477925 ZNF608Q9ULD9 1512 aaPredicted RBP13.66□□□□□ -0.22
SRPK2-210ENST00000477925 POLA1P09884 1462 aaPredicted RBP13.65□□□□□ -0.22
SRPK2-210ENST00000477925 IFT140Q96RY7 1462 aa13.65□□□□□ -0.22
SRPK2-210ENST00000477925 MYCNP04198 464 aaPredicted RBP13.63□□□□□ -0.23
SRPK2-210ENST00000477925 FGD5Q6ZNL6 1462 aa13.62□□□□□ -0.23
SRPK2-210ENST00000477925 TARBP1Q13395 1621 aaKnown RBP13.62□□□□□ -0.23
SRPK2-210ENST00000477925 RAD54L2Q9Y4B4 1467 aa13.62□□□□□ -0.23
SRPK2-210ENST00000477925 EIF4G3O43432 1585 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms