RNA–Protein interactions for RNA: ENST00000477798.5

PDCD6IP-210, Transcript of programmed cell death 6 interacting protein, humanhuman

TSL 4

Gene PDCD6IP, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-210ENST00000477798 NISCHQ9Y2I1 1504 aa35.42■■■■□ 3.26
PDCD6IP-210ENST00000477798 CCDC180Q9P1Z9 1646 aa31.62■■■□□ 2.65
PDCD6IP-210ENST00000477798 ABCC9O60706 1549 aa31.1■■■□□ 2.57
PDCD6IP-210ENST00000477798 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.38
PDCD6IP-210ENST00000477798 DCAF8L2P0C7V8 631 aa29.8■■■□□ 2.36
PDCD6IP-210ENST00000477798 NACADO15069 1562 aa29.8■■■□□ 2.36
PDCD6IP-210ENST00000477798 MYO15BQ96JP2 1530 aa29.54■■■□□ 2.32
PDCD6IP-210ENST00000477798 ZCCHC6Q5VYS8 1495 aaKnown RBP29.44■■■□□ 2.3
PDCD6IP-210ENST00000477798 DCAF1Q9Y4B6 1507 aa29.33■■■□□ 2.29
PDCD6IP-210ENST00000477798 UNC13AQ9UPW8 1703 aa29.14■■■□□ 2.25
PDCD6IP-210ENST00000477798 PABPN1Q86U42 306 aaKnown RBP eCLIP29.04■■■□□ 2.24
PDCD6IP-210ENST00000477798 BICRAQ9NZM4 1560 aa28.87■■■□□ 2.21
PDCD6IP-210ENST00000477798 SCRIBQ14160 1630 aa28.79■■■□□ 2.2
PDCD6IP-210ENST00000477798 SHROOM4Q9ULL8 1493 aa28.67■■■□□ 2.18
PDCD6IP-210ENST00000477798 DNAJC5BQ9UF47 199 aa28.67■■■□□ 2.18
PDCD6IP-210ENST00000477798 EIF4G1Q04637 1599 aaKnown RBP28.19■■■□□ 2.1
PDCD6IP-210ENST00000477798 CC2D2AQ9P2K1 1620 aa28.13■■■□□ 2.09
PDCD6IP-210ENST00000477798 CECR2Q9BXF3 1484 aa27.99■■■□□ 2.07
PDCD6IP-210ENST00000477798 SMARCA4P51532 1647 aa27.52■■■□□ 2
PDCD6IP-210ENST00000477798 BAZ1AQ9NRL2 1556 aaPredicted RBP27.52■■■□□ 2
PDCD6IP-210ENST00000477798 NCAPD3P42695 1498 aa27.47■■□□□ 1.99
PDCD6IP-210ENST00000477798 SMARCA2P51531 1590 aa27.45■■□□□ 1.99
PDCD6IP-210ENST00000477798 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
PDCD6IP-210ENST00000477798 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
PDCD6IP-210ENST00000477798 PEG3Q9GZU2 1588 aa27.26■■□□□ 1.96
PDCD6IP-210ENST00000477798 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.95
PDCD6IP-210ENST00000477798 BAZ1BQ9UIG0 1483 aaKnown RBP27.24■■□□□ 1.95
PDCD6IP-210ENST00000477798 WIZO95785 1651 aa26.97■■□□□ 1.91
PDCD6IP-210ENST00000477798 ERCC6Q03468 1493 aa26.9■■□□□ 1.9
PDCD6IP-210ENST00000477798 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
PDCD6IP-210ENST00000477798 NESP48681 1621 aa26.81■■□□□ 1.88
PDCD6IP-210ENST00000477798 LAMC3Q9Y6N6 1575 aa26.8■■□□□ 1.88
PDCD6IP-210ENST00000477798 TOP2AP11388 1531 aaKnown RBP26.7■■□□□ 1.86
PDCD6IP-210ENST00000477798 CADPSQ9ULU8 1353 aa26.68■■□□□ 1.86
PDCD6IP-210ENST00000477798 PDS5BQ9NTI5 1447 aa26.67■■□□□ 1.86
PDCD6IP-210ENST00000477798 CUX2O14529 1486 aa26.67■■□□□ 1.86
PDCD6IP-210ENST00000477798 KIF21AQ7Z4S6 1674 aa26.52■■□□□ 1.84
PDCD6IP-210ENST00000477798 THOC2Q8NI27 1593 aaKnown RBP26.46■■□□□ 1.83
PDCD6IP-210ENST00000477798 CFTRP13569 1480 aa26.45■■□□□ 1.82
PDCD6IP-210ENST00000477798 CCDC88BA6NC98 1476 aa26.38■■□□□ 1.81
PDCD6IP-210ENST00000477798 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
PDCD6IP-210ENST00000477798 FANCD2Q9BXW9 1451 aa26.36■■□□□ 1.81
PDCD6IP-210ENST00000477798 MRC2Q9UBG0 1479 aa26.35■■□□□ 1.81
PDCD6IP-210ENST00000477798 PRDM2Q13029 1718 aa26.27■■□□□ 1.8
PDCD6IP-210ENST00000477798 WDR62O43379 1518 aa26.24■■□□□ 1.79
PDCD6IP-210ENST00000477798 SUPT5HO00267 1087 aaKnown RBP26.14■■□□□ 1.78
PDCD6IP-210ENST00000477798 DNAJC5Q9H3Z4 198 aa26.1■■□□□ 1.77
PDCD6IP-210ENST00000477798 URB2Q14146 1524 aaKnown RBP26.05■■□□□ 1.76
PDCD6IP-210ENST00000477798 ABCC8Q09428 1581 aa25.99■■□□□ 1.75
PDCD6IP-210ENST00000477798 TOPBP1Q92547 1522 aa25.89■■□□□ 1.74
PDCD6IP-210ENST00000477798 DNMBPQ6XZF7 1577 aa25.86■■□□□ 1.73
PDCD6IP-210ENST00000477798 IFT140Q96RY7 1462 aa25.83■■□□□ 1.73
PDCD6IP-210ENST00000477798 POLA1P09884 1462 aaPredicted RBP25.65■■□□□ 1.7
PDCD6IP-210ENST00000477798 ZNF608Q9ULD9 1512 aaPredicted RBP25.64■■□□□ 1.7
PDCD6IP-210ENST00000477798 TARBP1Q13395 1621 aaKnown RBP25.6■■□□□ 1.69
PDCD6IP-210ENST00000477798 SOGA1O94964 1423 aa25.6■■□□□ 1.69
PDCD6IP-210ENST00000477798 OSCARQ8IYS5 282 aa25.59■■□□□ 1.69
PDCD6IP-210ENST00000477798 CUX1P39880 1505 aa25.58■■□□□ 1.69
PDCD6IP-210ENST00000477798 FGD5Q6ZNL6 1462 aa25.56■■□□□ 1.68
PDCD6IP-210ENST00000477798 EIF4G3O43432 1585 aaKnown RBP25.56■■□□□ 1.68
PDCD6IP-210ENST00000477798 RAD54L2Q9Y4B4 1467 aa25.53■■□□□ 1.68
PDCD6IP-210ENST00000477798 AQRO60306 1485 aaKnown RBP eCLIP25.52■■□□□ 1.681e-9■■■■□ 19.7
PDCD6IP-210ENST00000477798 WDR97A6NE52 1622 aa25.48■■□□□ 1.67
PDCD6IP-210ENST00000477798 TDRD9Q8NDG6 1382 aaKnown RBP25.44■■□□□ 1.66
PDCD6IP-210ENST00000477798 WRNQ14191 1432 aaPredicted RBP eCLIP25.41■■□□□ 1.66
PDCD6IP-210ENST00000477798 TOP2BQ02880 1626 aa25.36■■□□□ 1.65
PDCD6IP-210ENST00000477798 BIVM-ERCC5R4GMW8 1640 aa25.35■■□□□ 1.65
PDCD6IP-210ENST00000477798 FBLN2P98095 1184 aa25.35■■□□□ 1.65
PDCD6IP-210ENST00000477798 ABCA10Q8WWZ4 1543 aa25.32■■□□□ 1.64
PDCD6IP-210ENST00000477798 GRIN2BQ13224 1484 aa25.32■■□□□ 1.64
PDCD6IP-210ENST00000477798 CHD1O14646 1710 aa25.29■■□□□ 1.64
PDCD6IP-210ENST00000477798 GAPVD1Q14C86 1478 aa25.29■■□□□ 1.64
PDCD6IP-210ENST00000477798 SYNJ1O43426 1573 aa25.29■■□□□ 1.64
PDCD6IP-210ENST00000477798 MAGI1Q96QZ7 1491 aaPredicted RBP25.28■■□□□ 1.64
PDCD6IP-210ENST00000477798 SNAPC4Q5SXM2 1469 aa25.27■■□□□ 1.64
PDCD6IP-210ENST00000477798 CHMP7Q8WUX9 453 aaPredicted RBP25.25■■□□□ 1.63
PDCD6IP-210ENST00000477798 PBRM1Q86U86 1689 aa25.23■■□□□ 1.63
PDCD6IP-210ENST00000477798 ABCA5Q8WWZ7 1642 aa25.21■■□□□ 1.63
PDCD6IP-210ENST00000477798 SYNJ2O15056 1496 aa25.17■■□□□ 1.62
PDCD6IP-210ENST00000477798 TRIM41Q8WV44 630 aa25.16■■□□□ 1.62
PDCD6IP-210ENST00000477798 RIMBP3CA6NJZ7 1639 aa25.09■■□□□ 1.61
PDCD6IP-210ENST00000477798 RIMBP3BA6NNM3 1639 aa25.09■■□□□ 1.61
PDCD6IP-210ENST00000477798 RIMBP3Q9UFD9 1639 aa25.09■■□□□ 1.61
PDCD6IP-210ENST00000477798 ARHGEF11O15085 1522 aa25.07■■□□□ 1.6
PDCD6IP-210ENST00000477798 ERICH3Q5RHP9 1530 aa25.04■■□□□ 1.6
PDCD6IP-210ENST00000477798 FHAD1B1AJZ9 1412 aa25■■□□□ 1.59
PDCD6IP-210ENST00000477798 ADAMTS12P58397 1594 aa24.98■■□□□ 1.59
PDCD6IP-210ENST00000477798 CLASP1Q7Z460 1538 aa24.98■■□□□ 1.59
PDCD6IP-210ENST00000477798 GRIN2AQ12879 1464 aa24.96■■□□□ 1.59
PDCD6IP-210ENST00000477798 KIF27Q86VH2 1401 aa24.94■■□□□ 1.58
PDCD6IP-210ENST00000477798 CYB5RLQ6IPT4 315 aa24.92■■□□□ 1.58
PDCD6IP-210ENST00000477798 NUP160Q12769 1436 aa24.85■■□□□ 1.57
PDCD6IP-210ENST00000477798 ARAP1Q96P48 1450 aa24.82■■□□□ 1.56
PDCD6IP-210ENST00000477798 IGF1RP08069 1367 aa24.81■■□□□ 1.56
PDCD6IP-210ENST00000477798 CEP170Q5SW79 1584 aa24.8■■□□□ 1.56
PDCD6IP-210ENST00000477798 CUL7Q14999 1698 aa24.78■■□□□ 1.56
PDCD6IP-210ENST00000477798 CARMIL1Q5VZK9 1371 aa24.69■■□□□ 1.54
PDCD6IP-210ENST00000477798 JPH4Q96JJ6 628 aa24.68■■□□□ 1.54
PDCD6IP-210ENST00000477798 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
PDCD6IP-210ENST00000477798 RUSC2Q8N2Y8 1516 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms