RNA–Protein interactions for RNA: ENST00000477328.1

TBRG4-207, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 2

Gene TBRG4, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-207ENST00000477328 NISCHQ9Y2I1 1504 aa29.4■■■□□ 2.3
TBRG4-207ENST00000477328 ABCC9O60706 1549 aa26.46■■□□□ 1.83
TBRG4-207ENST00000477328 CCDC180Q9P1Z9 1646 aa26.39■■□□□ 1.82
TBRG4-207ENST00000477328 RB1CC1Q8TDY2 1594 aa25.11■■□□□ 1.61
TBRG4-207ENST00000477328 DNAJC5BQ9UF47 199 aa24.98■■□□□ 1.59
TBRG4-207ENST00000477328 NACADO15069 1562 aa24.94■■□□□ 1.58
TBRG4-207ENST00000477328 UNC13AQ9UPW8 1703 aa24.69■■□□□ 1.54
TBRG4-207ENST00000477328 DCAF8L2P0C7V8 631 aa24.69■■□□□ 1.54
TBRG4-207ENST00000477328 PABPN1Q86U42 306 aaKnown RBP eCLIP24.62■■□□□ 1.53
TBRG4-207ENST00000477328 MYO15BQ96JP2 1530 aa24.61■■□□□ 1.53
TBRG4-207ENST00000477328 BICRAQ9NZM4 1560 aa24.53■■□□□ 1.52
TBRG4-207ENST00000477328 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
TBRG4-207ENST00000477328 DCAF1Q9Y4B6 1507 aa24.27■■□□□ 1.48
TBRG4-207ENST00000477328 SCRIBQ14160 1630 aa24.06■■□□□ 1.44
TBRG4-207ENST00000477328 SHROOM4Q9ULL8 1493 aa24.04■■□□□ 1.44
TBRG4-207ENST00000477328 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
TBRG4-207ENST00000477328 EIF4G1Q04637 1599 aaKnown RBP23.86■■□□□ 1.41
TBRG4-207ENST00000477328 CECR2Q9BXF3 1484 aa23.82■■□□□ 1.4
TBRG4-207ENST00000477328 NCAPD3P42695 1498 aa23.06■■□□□ 1.28
TBRG4-207ENST00000477328 ATAD2BQ9ULI0 1458 aa22.99■■□□□ 1.27
TBRG4-207ENST00000477328 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
TBRG4-207ENST00000477328 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
TBRG4-207ENST00000477328 DNAJC5Q9H3Z4 198 aa22.87■■□□□ 1.25
TBRG4-207ENST00000477328 SMARCA2P51531 1590 aa22.85■■□□□ 1.25
TBRG4-207ENST00000477328 CUX2O14529 1486 aa22.79■■□□□ 1.24
TBRG4-207ENST00000477328 BAZ1AQ9NRL2 1556 aaPredicted RBP22.78■■□□□ 1.24
TBRG4-207ENST00000477328 NESP48681 1621 aa22.78■■□□□ 1.24
TBRG4-207ENST00000477328 PEG3Q9GZU2 1588 aa22.76■■□□□ 1.23
TBRG4-207ENST00000477328 ERCC6Q03468 1493 aa22.75■■□□□ 1.23
TBRG4-207ENST00000477328 BAZ1BQ9UIG0 1483 aaKnown RBP22.71■■□□□ 1.23
TBRG4-207ENST00000477328 MROH2BQ7Z745 1585 aa22.7■■□□□ 1.22
TBRG4-207ENST00000477328 THOC2Q8NI27 1593 aaKnown RBP22.56■■□□□ 1.2
TBRG4-207ENST00000477328 LAMC3Q9Y6N6 1575 aa22.51■■□□□ 1.19
TBRG4-207ENST00000477328 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
TBRG4-207ENST00000477328 WIZO95785 1651 aa22.42■■□□□ 1.18
TBRG4-207ENST00000477328 PDS5BQ9NTI5 1447 aa22.33■■□□□ 1.17
TBRG4-207ENST00000477328 CADPSQ9ULU8 1353 aa22.32■■□□□ 1.16
TBRG4-207ENST00000477328 MRC2Q9UBG0 1479 aa22.21■■□□□ 1.15
TBRG4-207ENST00000477328 WDR62O43379 1518 aa22.2■■□□□ 1.14
TBRG4-207ENST00000477328 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
TBRG4-207ENST00000477328 CFTRP13569 1480 aa22.09■■□□□ 1.13
TBRG4-207ENST00000477328 TOP2AP11388 1531 aaKnown RBP22.08■■□□□ 1.13
TBRG4-207ENST00000477328 FANCD2Q9BXW9 1451 aa22.08■■□□□ 1.12
TBRG4-207ENST00000477328 CEP164Q9UPV0 1460 aa22.08■■□□□ 1.12
TBRG4-207ENST00000477328 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
TBRG4-207ENST00000477328 PRDM2Q13029 1718 aa21.87■■□□□ 1.09
TBRG4-207ENST00000477328 CCDC88BA6NC98 1476 aa21.85■■□□□ 1.09
TBRG4-207ENST00000477328 TRIM41Q8WV44 630 aa21.77■■□□□ 1.08
TBRG4-207ENST00000477328 ZNF608Q9ULD9 1512 aaPredicted RBP21.7■■□□□ 1.07
TBRG4-207ENST00000477328 OSCARQ8IYS5 282 aa21.68■■□□□ 1.06
TBRG4-207ENST00000477328 TOPBP1Q92547 1522 aa21.68■■□□□ 1.06
TBRG4-207ENST00000477328 IFT140Q96RY7 1462 aa21.64■■□□□ 1.06
TBRG4-207ENST00000477328 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
TBRG4-207ENST00000477328 EIF4G3O43432 1585 aaKnown RBP21.56■■□□□ 1.04
TBRG4-207ENST00000477328 TARBP1Q13395 1621 aaKnown RBP21.54■■□□□ 1.04
TBRG4-207ENST00000477328 RIMBP3CA6NJZ7 1639 aa21.52■■□□□ 1.04
TBRG4-207ENST00000477328 RIMBP3BA6NNM3 1639 aa21.52■■□□□ 1.04
TBRG4-207ENST00000477328 RIMBP3Q9UFD9 1639 aa21.52■■□□□ 1.04
TBRG4-207ENST00000477328 ABCC8Q09428 1581 aa21.52■■□□□ 1.04
TBRG4-207ENST00000477328 AQRO60306 1485 aaKnown RBP eCLIP21.46■■□□□ 1.037e-8■■■■■ 34.3
TBRG4-207ENST00000477328 POLA1P09884 1462 aaPredicted RBP21.46■■□□□ 1.03
TBRG4-207ENST00000477328 SUPT5HO00267 1087 aaKnown RBP21.44■■□□□ 1.02
TBRG4-207ENST00000477328 ARHGEF11O15085 1522 aa21.44■■□□□ 1.02
TBRG4-207ENST00000477328 CHD1O14646 1710 aa21.42■■□□□ 1.02
TBRG4-207ENST00000477328 RAD54L2Q9Y4B4 1467 aa21.4■■□□□ 1.02
TBRG4-207ENST00000477328 CUX1P39880 1505 aa21.32■■□□□ 1
TBRG4-207ENST00000477328 TDRD9Q8NDG6 1382 aaKnown RBP21.31■■□□□ 1
TBRG4-207ENST00000477328 FGD5Q6ZNL6 1462 aa21.31■■□□□ 1
TBRG4-207ENST00000477328 SOGA1O94964 1423 aa21.3■■□□□ 1
TBRG4-207ENST00000477328 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
TBRG4-207ENST00000477328 SNAPC4Q5SXM2 1469 aa21.23■□□□□ 0.99
TBRG4-207ENST00000477328 WDR97A6NE52 1622 aa21.22■□□□□ 0.99
TBRG4-207ENST00000477328 FBLN2P98095 1184 aa21.21■□□□□ 0.99
TBRG4-207ENST00000477328 CYB5RLQ6IPT4 315 aa21.2■□□□□ 0.98
TBRG4-207ENST00000477328 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
TBRG4-207ENST00000477328 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
TBRG4-207ENST00000477328 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
TBRG4-207ENST00000477328 PBRM1Q86U86 1689 aa21.1■□□□□ 0.97
TBRG4-207ENST00000477328 SYNJ2O15056 1496 aa21.08■□□□□ 0.97
TBRG4-207ENST00000477328 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
TBRG4-207ENST00000477328 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
TBRG4-207ENST00000477328 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
TBRG4-207ENST00000477328 ABCA10Q8WWZ4 1543 aa21.05■□□□□ 0.96
TBRG4-207ENST00000477328 CHMP7Q8WUX9 453 aaPredicted RBP21.04■□□□□ 0.96
TBRG4-207ENST00000477328 BIVM-ERCC5R4GMW8 1640 aa20.95■□□□□ 0.94
TBRG4-207ENST00000477328 WRNQ14191 1432 aaPredicted RBP eCLIP20.95■□□□□ 0.94
TBRG4-207ENST00000477328 TOP2BQ02880 1626 aa20.93■□□□□ 0.94
TBRG4-207ENST00000477328 TRHP20396 242 aaPredicted RBP20.92■□□□□ 0.94
TBRG4-207ENST00000477328 ADAMTS12P58397 1594 aa20.9■□□□□ 0.94
TBRG4-207ENST00000477328 ERCC6L2Q5T890 1561 aa20.9■□□□□ 0.94
TBRG4-207ENST00000477328 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
TBRG4-207ENST00000477328 CEP170Q5SW79 1584 aa20.88■□□□□ 0.93
TBRG4-207ENST00000477328 NUP160Q12769 1436 aa20.85■□□□□ 0.93
TBRG4-207ENST00000477328 SHROOM2Q13796 1616 aa20.78■□□□□ 0.92
TBRG4-207ENST00000477328 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
TBRG4-207ENST00000477328 ERICH3Q5RHP9 1530 aa20.77■□□□□ 0.92
TBRG4-207ENST00000477328 RUSC2Q8N2Y8 1516 aa20.62■□□□□ 0.89
TBRG4-207ENST00000477328 PRG4Q92954 1404 aaPredicted RBP20.6■□□□□ 0.89
TBRG4-207ENST00000477328 JPH4Q96JJ6 628 aa20.56■□□□□ 0.88
TBRG4-207ENST00000477328 KIF13AQ9H1H9 1805 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms