RNA–Protein interactions for RNA: ENST00000477252.1

ABCF2-206, Transcript of ATP binding cassette subfamily F member 2, humanhuman

TSL 3

Gene ABCF2, Length 249 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF2-206ENST00000477252 NISCHQ9Y2I1 1504 aa42.25■■■■■ 4.35
ABCF2-206ENST00000477252 ABCC9O60706 1549 aa37.77■■■■□ 3.64
ABCF2-206ENST00000477252 CCDC180Q9P1Z9 1646 aa37.73■■■■□ 3.63
ABCF2-206ENST00000477252 RB1CC1Q8TDY2 1594 aa35.9■■■■□ 3.34
ABCF2-206ENST00000477252 DCAF8L2P0C7V8 631 aa35.79■■■■□ 3.32
ABCF2-206ENST00000477252 NACADO15069 1562 aa35.68■■■■□ 3.3
ABCF2-206ENST00000477252 DNAJC5BQ9UF47 199 aa35.41■■■■□ 3.26
ABCF2-206ENST00000477252 PABPN1Q86U42 306 aaKnown RBP eCLIP35.28■■■■□ 3.24
ABCF2-206ENST00000477252 MYO15BQ96JP2 1530 aa35.2■■■■□ 3.23
ABCF2-206ENST00000477252 UNC13AQ9UPW8 1703 aa35.11■■■■□ 3.21
ABCF2-206ENST00000477252 ZCCHC6Q5VYS8 1495 aaKnown RBP35.01■■■■□ 3.19
ABCF2-206ENST00000477252 BICRAQ9NZM4 1560 aa34.91■■■■□ 3.18
ABCF2-206ENST00000477252 DCAF1Q9Y4B6 1507 aa34.83■■■■□ 3.17
ABCF2-206ENST00000477252 SCRIBQ14160 1630 aa34.51■■■■□ 3.11
ABCF2-206ENST00000477252 SHROOM4Q9ULL8 1493 aa34.3■■■■□ 3.08
ABCF2-206ENST00000477252 CC2D2AQ9P2K1 1620 aa34.07■■■■□ 3.04
ABCF2-206ENST00000477252 EIF4G1Q04637 1599 aaKnown RBP34.01■■■■□ 3.03
ABCF2-206ENST00000477252 CECR2Q9BXF3 1484 aa33.96■■■■□ 3.03
ABCF2-206ENST00000477252 NCAPD3P42695 1498 aa32.99■■■□□ 2.87
ABCF2-206ENST00000477252 ATAD2BQ9ULI0 1458 aa32.93■■■□□ 2.86
ABCF2-206ENST00000477252 SMARCA4P51532 1647 aa32.89■■■□□ 2.86
ABCF2-206ENST00000477252 SMARCA2P51531 1590 aa32.79■■■□□ 2.84
ABCF2-206ENST00000477252 BAZ1AQ9NRL2 1556 aaPredicted RBP32.74■■■□□ 2.83
ABCF2-206ENST00000477252 HMGXB3Q12766 1538 aa32.69■■■□□ 2.82
ABCF2-206ENST00000477252 MROH2BQ7Z745 1585 aa32.6■■■□□ 2.81
ABCF2-206ENST00000477252 BAZ1BQ9UIG0 1483 aaKnown RBP32.6■■■□□ 2.81
ABCF2-206ENST00000477252 ERCC6Q03468 1493 aa32.54■■■□□ 2.8
ABCF2-206ENST00000477252 PEG3Q9GZU2 1588 aa32.53■■■□□ 2.8
ABCF2-206ENST00000477252 NESP48681 1621 aa32.51■■■□□ 2.79
ABCF2-206ENST00000477252 CUX2O14529 1486 aa32.37■■■□□ 2.77
ABCF2-206ENST00000477252 DNAJC5Q9H3Z4 198 aa32.33■■■□□ 2.77
ABCF2-206ENST00000477252 WIZO95785 1651 aa32.21■■■□□ 2.75
ABCF2-206ENST00000477252 LAMC3Q9Y6N6 1575 aa32.17■■■□□ 2.74
ABCF2-206ENST00000477252 PDS5BQ9NTI5 1447 aa32.03■■■□□ 2.72
ABCF2-206ENST00000477252 CADPSQ9ULU8 1353 aa32.03■■■□□ 2.72
ABCF2-206ENST00000477252 THOC2Q8NI27 1593 aaKnown RBP32.02■■■□□ 2.72
ABCF2-206ENST00000477252 KIF21AQ7Z4S6 1674 aa32.01■■■□□ 2.71
ABCF2-206ENST00000477252 RSF1Q96T23 1441 aaPredicted RBP31.99■■■□□ 2.71
ABCF2-206ENST00000477252 TOP2AP11388 1531 aaKnown RBP31.75■■■□□ 2.67
ABCF2-206ENST00000477252 MRC2Q9UBG0 1479 aa31.73■■■□□ 2.67
ABCF2-206ENST00000477252 CFTRP13569 1480 aa31.66■■■□□ 2.66
ABCF2-206ENST00000477252 FANCD2Q9BXW9 1451 aa31.65■■■□□ 2.66
ABCF2-206ENST00000477252 CEP164Q9UPV0 1460 aa31.64■■■□□ 2.66
ABCF2-206ENST00000477252 WDR62O43379 1518 aa31.62■■■□□ 2.65
ABCF2-206ENST00000477252 CCDC88BA6NC98 1476 aa31.47■■■□□ 2.63
ABCF2-206ENST00000477252 URB2Q14146 1524 aaKnown RBP31.39■■■□□ 2.62
ABCF2-206ENST00000477252 PRDM2Q13029 1718 aa31.26■■■□□ 2.59
ABCF2-206ENST00000477252 TOPBP1Q92547 1522 aa31.07■■■□□ 2.56
ABCF2-206ENST00000477252 OSCARQ8IYS5 282 aa31.05■■■□□ 2.56
ABCF2-206ENST00000477252 TRIM41Q8WV44 630 aa31.03■■■□□ 2.56
ABCF2-206ENST00000477252 ZNF608Q9ULD9 1512 aaPredicted RBP31.02■■■□□ 2.56
ABCF2-206ENST00000477252 IFT140Q96RY7 1462 aa31.01■■■□□ 2.55
ABCF2-206ENST00000477252 ABCC8Q09428 1581 aa30.95■■■□□ 2.54
ABCF2-206ENST00000477252 DNMBPQ6XZF7 1577 aa30.92■■■□□ 2.54
ABCF2-206ENST00000477252 SUPT5HO00267 1087 aaKnown RBP30.82■■■□□ 2.52
ABCF2-206ENST00000477252 AQRO60306 1485 aaKnown RBP eCLIP30.77■■■□□ 2.521e-8■■■■□ 24.7
ABCF2-206ENST00000477252 TARBP1Q13395 1621 aaKnown RBP30.76■■■□□ 2.51
ABCF2-206ENST00000477252 POLA1P09884 1462 aaPredicted RBP30.76■■■□□ 2.51
ABCF2-206ENST00000477252 EIF4G3O43432 1585 aaKnown RBP30.75■■■□□ 2.51
ABCF2-206ENST00000477252 RAD54L2Q9Y4B4 1467 aa30.71■■■□□ 2.51
ABCF2-206ENST00000477252 SOGA1O94964 1423 aa30.66■■■□□ 2.5
ABCF2-206ENST00000477252 TDRD9Q8NDG6 1382 aaKnown RBP30.63■■■□□ 2.49
ABCF2-206ENST00000477252 CUX1P39880 1505 aa30.6■■■□□ 2.49
ABCF2-206ENST00000477252 FGD5Q6ZNL6 1462 aa30.59■■■□□ 2.49
ABCF2-206ENST00000477252 FBLN2P98095 1184 aa30.59■■■□□ 2.49
ABCF2-206ENST00000477252 RIMBP3CA6NJZ7 1639 aa30.55■■■□□ 2.48
ABCF2-206ENST00000477252 RIMBP3BA6NNM3 1639 aa30.55■■■□□ 2.48
ABCF2-206ENST00000477252 RIMBP3Q9UFD9 1639 aa30.55■■■□□ 2.48
ABCF2-206ENST00000477252 CHD1O14646 1710 aa30.52■■■□□ 2.48
ABCF2-206ENST00000477252 ARHGEF11O15085 1522 aa30.47■■■□□ 2.47
ABCF2-206ENST00000477252 SNAPC4Q5SXM2 1469 aa30.4■■■□□ 2.46
ABCF2-206ENST00000477252 CYB5RLQ6IPT4 315 aa30.37■■■□□ 2.45
ABCF2-206ENST00000477252 CHMP7Q8WUX9 453 aaPredicted RBP30.35■■■□□ 2.45
ABCF2-206ENST00000477252 WDR97A6NE52 1622 aa30.34■■■□□ 2.45
ABCF2-206ENST00000477252 GRIN2BQ13224 1484 aa30.32■■■□□ 2.44
ABCF2-206ENST00000477252 MAGI1Q96QZ7 1491 aaPredicted RBP30.27■■■□□ 2.44
ABCF2-206ENST00000477252 GAPVD1Q14C86 1478 aa30.25■■■□□ 2.43
ABCF2-206ENST00000477252 ABCA10Q8WWZ4 1543 aa30.22■■■□□ 2.43
ABCF2-206ENST00000477252 ARAP1Q96P48 1450 aa30.2■■■□□ 2.43
ABCF2-206ENST00000477252 SYNJ2O15056 1496 aa30.19■■■□□ 2.42
ABCF2-206ENST00000477252 PBRM1Q86U86 1689 aa30.17■■■□□ 2.42
ABCF2-206ENST00000477252 CLASP1Q7Z460 1538 aa30.16■■■□□ 2.42
ABCF2-206ENST00000477252 WRNQ14191 1432 aaPredicted RBP eCLIP30.15■■■□□ 2.42
ABCF2-206ENST00000477252 SYNJ1O43426 1573 aa30.14■■■□□ 2.42
ABCF2-206ENST00000477252 ABCA5Q8WWZ7 1642 aa30.14■■■□□ 2.41
ABCF2-206ENST00000477252 TOP2BQ02880 1626 aa30.11■■■□□ 2.41
ABCF2-206ENST00000477252 BIVM-ERCC5R4GMW8 1640 aa30.08■■■□□ 2.41
ABCF2-206ENST00000477252 TRHP20396 242 aaPredicted RBP29.97■■■□□ 2.39
ABCF2-206ENST00000477252 GRIN2AQ12879 1464 aa29.93■■■□□ 2.38
ABCF2-206ENST00000477252 ADAMTS12P58397 1594 aa29.9■■■□□ 2.38
ABCF2-206ENST00000477252 FHAD1B1AJZ9 1412 aa29.87■■■□□ 2.37
ABCF2-206ENST00000477252 CEP170Q5SW79 1584 aa29.82■■■□□ 2.36
ABCF2-206ENST00000477252 ERICH3Q5RHP9 1530 aa29.82■■■□□ 2.36
ABCF2-206ENST00000477252 NUP160Q12769 1436 aa29.82■■■□□ 2.36
ABCF2-206ENST00000477252 ERCC6L2Q5T890 1561 aa29.79■■■□□ 2.36
ABCF2-206ENST00000477252 SHROOM2Q13796 1616 aa29.64■■■□□ 2.34
ABCF2-206ENST00000477252 JPH4Q96JJ6 628 aa29.62■■■□□ 2.33
ABCF2-206ENST00000477252 IGF1RP08069 1367 aa29.6■■■□□ 2.33
ABCF2-206ENST00000477252 PRG4Q92954 1404 aaPredicted RBP29.58■■■□□ 2.33
ABCF2-206ENST00000477252 KIF27Q86VH2 1401 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms