RNA–Protein interactions for RNA: ENST00000477244.5

CALM3-203, Transcript of calmodulin 3, humanhuman

TSL 3

Gene CALM3, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-203ENST00000477244 NISCHQ9Y2I1 1504 aa28.82■■■□□ 2.2
CALM3-203ENST00000477244 ABCC9O60706 1549 aa25.93■■□□□ 1.74
CALM3-203ENST00000477244 CCDC180Q9P1Z9 1646 aa25.76■■□□□ 1.71
CALM3-203ENST00000477244 RB1CC1Q8TDY2 1594 aa24.55■■□□□ 1.52
CALM3-203ENST00000477244 DCAF8L2P0C7V8 631 aa24.51■■□□□ 1.51
CALM3-203ENST00000477244 DNAJC5BQ9UF47 199 aa24.38■■□□□ 1.49
CALM3-203ENST00000477244 NACADO15069 1562 aa24.37■■□□□ 1.49
CALM3-203ENST00000477244 PABPN1Q86U42 306 aaKnown RBP eCLIP24.22■■□□□ 1.47
CALM3-203ENST00000477244 UNC13AQ9UPW8 1703 aa24.09■■□□□ 1.45
CALM3-203ENST00000477244 MYO15BQ96JP2 1530 aa23.96■■□□□ 1.43
CALM3-203ENST00000477244 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
CALM3-203ENST00000477244 ZCCHC6Q5VYS8 1495 aaKnown RBP23.87■■□□□ 1.41
CALM3-203ENST00000477244 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
CALM3-203ENST00000477244 SCRIBQ14160 1630 aa23.63■■□□□ 1.37
CALM3-203ENST00000477244 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
CALM3-203ENST00000477244 CC2D2AQ9P2K1 1620 aa23.37■■□□□ 1.33
CALM3-203ENST00000477244 EIF4G1Q04637 1599 aaKnown RBP23.3■■□□□ 1.32
CALM3-203ENST00000477244 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
CALM3-203ENST00000477244 NCAPD3P42695 1498 aa22.53■■□□□ 1.2
CALM3-203ENST00000477244 ATAD2BQ9ULI0 1458 aa22.5■■□□□ 1.19
CALM3-203ENST00000477244 SMARCA4P51532 1647 aa22.48■■□□□ 1.19
CALM3-203ENST00000477244 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
CALM3-203ENST00000477244 ERCC6Q03468 1493 aa22.33■■□□□ 1.16
CALM3-203ENST00000477244 BAZ1AQ9NRL2 1556 aaPredicted RBP22.33■■□□□ 1.16
CALM3-203ENST00000477244 HMGXB3Q12766 1538 aa22.32■■□□□ 1.16
CALM3-203ENST00000477244 NESP48681 1621 aa22.3■■□□□ 1.16
CALM3-203ENST00000477244 BAZ1BQ9UIG0 1483 aaKnown RBP22.28■■□□□ 1.16
CALM3-203ENST00000477244 MROH2BQ7Z745 1585 aa22.27■■□□□ 1.16
CALM3-203ENST00000477244 DNAJC5Q9H3Z4 198 aa22.26■■□□□ 1.15
CALM3-203ENST00000477244 CUX2O14529 1486 aa22.19■■□□□ 1.14
CALM3-203ENST00000477244 PEG3Q9GZU2 1588 aa22.19■■□□□ 1.14
CALM3-203ENST00000477244 WIZO95785 1651 aa22.02■■□□□ 1.12
CALM3-203ENST00000477244 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
CALM3-203ENST00000477244 KIF21AQ7Z4S6 1674 aa21.97■■□□□ 1.11
CALM3-203ENST00000477244 THOC2Q8NI27 1593 aaKnown RBP21.96■■□□□ 1.11
CALM3-203ENST00000477244 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.09
CALM3-203ENST00000477244 CADPSQ9ULU8 1353 aa21.87■■□□□ 1.09
CALM3-203ENST00000477244 RSF1Q96T23 1441 aaPredicted RBP21.8■■□□□ 1.08
CALM3-203ENST00000477244 MRC2Q9UBG0 1479 aa21.72■■□□□ 1.07
CALM3-203ENST00000477244 TOP2AP11388 1531 aaKnown RBP21.65■■□□□ 1.06
CALM3-203ENST00000477244 WDR62O43379 1518 aa21.65■■□□□ 1.06
CALM3-203ENST00000477244 FANCD2Q9BXW9 1451 aa21.64■■□□□ 1.05
CALM3-203ENST00000477244 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.05
CALM3-203ENST00000477244 CFTRP13569 1480 aa21.61■■□□□ 1.05
CALM3-203ENST00000477244 URB2Q14146 1524 aaKnown RBP21.49■■□□□ 1.03
CALM3-203ENST00000477244 CCDC88BA6NC98 1476 aa21.48■■□□□ 1.03
CALM3-203ENST00000477244 TRIM41Q8WV44 630 aa21.41■■□□□ 1.02
CALM3-203ENST00000477244 PRDM2Q13029 1718 aa21.37■■□□□ 1.01
CALM3-203ENST00000477244 OSCARQ8IYS5 282 aa21.27■■□□□ 1
CALM3-203ENST00000477244 ZNF608Q9ULD9 1512 aaPredicted RBP21.26■□□□□ 0.99
CALM3-203ENST00000477244 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
CALM3-203ENST00000477244 IFT140Q96RY7 1462 aa21.19■□□□□ 0.98
CALM3-203ENST00000477244 DNMBPQ6XZF7 1577 aa21.13■□□□□ 0.97
CALM3-203ENST00000477244 ABCC8Q09428 1581 aa21.09■□□□□ 0.97
CALM3-203ENST00000477244 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.961e-10■■□□□ 12.6
CALM3-203ENST00000477244 EIF4G3O43432 1585 aaKnown RBP21.07■□□□□ 0.96
CALM3-203ENST00000477244 TARBP1Q13395 1621 aaKnown RBP21.04■□□□□ 0.96
CALM3-203ENST00000477244 POLA1P09884 1462 aaPredicted RBP21.02■□□□□ 0.96
CALM3-203ENST00000477244 RAD54L2Q9Y4B4 1467 aa21.02■□□□□ 0.96
CALM3-203ENST00000477244 RIMBP3CA6NJZ7 1639 aa21■□□□□ 0.95
CALM3-203ENST00000477244 RIMBP3BA6NNM3 1639 aa21■□□□□ 0.95
CALM3-203ENST00000477244 RIMBP3Q9UFD9 1639 aa21■□□□□ 0.95
CALM3-203ENST00000477244 SUPT5HO00267 1087 aaKnown RBP20.98■□□□□ 0.95
CALM3-203ENST00000477244 FBLN2P98095 1184 aa20.97■□□□□ 0.95
CALM3-203ENST00000477244 TDRD9Q8NDG6 1382 aaKnown RBP20.96■□□□□ 0.95
CALM3-203ENST00000477244 CHD1O14646 1710 aa20.95■□□□□ 0.94
CALM3-203ENST00000477244 SOGA1O94964 1423 aa20.95■□□□□ 0.94
CALM3-203ENST00000477244 ARHGEF11O15085 1522 aa20.92■□□□□ 0.94
CALM3-203ENST00000477244 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
CALM3-203ENST00000477244 CUX1P39880 1505 aa20.9■□□□□ 0.94
CALM3-203ENST00000477244 CYB5RLQ6IPT4 315 aa20.85■□□□□ 0.93
CALM3-203ENST00000477244 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
CALM3-203ENST00000477244 CHMP7Q8WUX9 453 aaPredicted RBP20.75■□□□□ 0.91
CALM3-203ENST00000477244 ARAP1Q96P48 1450 aa20.73■□□□□ 0.91
CALM3-203ENST00000477244 WDR97A6NE52 1622 aa20.71■□□□□ 0.91
CALM3-203ENST00000477244 GRIN2BQ13224 1484 aa20.71■□□□□ 0.91
CALM3-203ENST00000477244 MAGI1Q96QZ7 1491 aaPredicted RBP20.68■□□□□ 0.9
CALM3-203ENST00000477244 GAPVD1Q14C86 1478 aa20.67■□□□□ 0.9
CALM3-203ENST00000477244 PBRM1Q86U86 1689 aa20.66■□□□□ 0.9
CALM3-203ENST00000477244 CLASP1Q7Z460 1538 aa20.65■□□□□ 0.9
CALM3-203ENST00000477244 SYNJ2O15056 1496 aa20.64■□□□□ 0.89
CALM3-203ENST00000477244 TRHP20396 242 aaPredicted RBP20.62■□□□□ 0.89
CALM3-203ENST00000477244 SYNJ1O43426 1573 aa20.62■□□□□ 0.89
CALM3-203ENST00000477244 ABCA10Q8WWZ4 1543 aa20.62■□□□□ 0.89
CALM3-203ENST00000477244 ABCA5Q8WWZ7 1642 aa20.6■□□□□ 0.89
CALM3-203ENST00000477244 WRNQ14191 1432 aaPredicted RBP eCLIP20.55■□□□□ 0.88
CALM3-203ENST00000477244 TOP2BQ02880 1626 aa20.53■□□□□ 0.88
CALM3-203ENST00000477244 BIVM-ERCC5R4GMW8 1640 aa20.52■□□□□ 0.88
CALM3-203ENST00000477244 GRIN2AQ12879 1464 aa20.46■□□□□ 0.87
CALM3-203ENST00000477244 ADAMTS12P58397 1594 aa20.45■□□□□ 0.86
CALM3-203ENST00000477244 ERCC6L2Q5T890 1561 aa20.45■□□□□ 0.86
CALM3-203ENST00000477244 CEP170Q5SW79 1584 aa20.42■□□□□ 0.86
CALM3-203ENST00000477244 FHAD1B1AJZ9 1412 aa20.38■□□□□ 0.85
CALM3-203ENST00000477244 NUP160Q12769 1436 aa20.37■□□□□ 0.85
CALM3-203ENST00000477244 ERICH3Q5RHP9 1530 aa20.33■□□□□ 0.85
CALM3-203ENST00000477244 SHROOM2Q13796 1616 aa20.27■□□□□ 0.83
CALM3-203ENST00000477244 PRG4Q92954 1404 aaPredicted RBP20.24■□□□□ 0.83
CALM3-203ENST00000477244 JPH4Q96JJ6 628 aa20.23■□□□□ 0.83
CALM3-203ENST00000477244 IGF1RP08069 1367 aa20.17■□□□□ 0.82
CALM3-203ENST00000477244 RUSC2Q8N2Y8 1516 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms