RNA–Protein interactions for RNA: ENST00000477060.1

C1orf109-206, Transcript of chromosome 1 open reading frame 109, humanhuman

TSL 3

Gene C1orf109, Length 608 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf109-206ENST00000477060 NISCHQ9Y2I1 1504 aa39.23■■■■□ 3.87
C1orf109-206ENST00000477060 CCDC180Q9P1Z9 1646 aa35.05■■■■□ 3.2
C1orf109-206ENST00000477060 ABCC9O60706 1549 aa34.6■■■■□ 3.13
C1orf109-206ENST00000477060 RB1CC1Q8TDY2 1594 aa33.17■■■□□ 2.9
C1orf109-206ENST00000477060 NACADO15069 1562 aa33.04■■■□□ 2.88
C1orf109-206ENST00000477060 DCAF8L2P0C7V8 631 aa32.93■■■□□ 2.86
C1orf109-206ENST00000477060 MYO15BQ96JP2 1530 aa32.74■■■□□ 2.83
C1orf109-206ENST00000477060 ZCCHC6Q5VYS8 1495 aaKnown RBP32.61■■■□□ 2.81
C1orf109-206ENST00000477060 DCAF1Q9Y4B6 1507 aa32.46■■■□□ 2.79
C1orf109-206ENST00000477060 UNC13AQ9UPW8 1703 aa32.34■■■□□ 2.77
C1orf109-206ENST00000477060 PABPN1Q86U42 306 aaKnown RBP eCLIP32.27■■■□□ 2.76
C1orf109-206ENST00000477060 BICRAQ9NZM4 1560 aa32.12■■■□□ 2.73
C1orf109-206ENST00000477060 DNAJC5BQ9UF47 199 aa32.03■■■□□ 2.72
C1orf109-206ENST00000477060 SCRIBQ14160 1630 aa31.93■■■□□ 2.7
C1orf109-206ENST00000477060 SHROOM4Q9ULL8 1493 aa31.84■■■□□ 2.69
C1orf109-206ENST00000477060 EIF4G1Q04637 1599 aaKnown RBP31.34■■■□□ 2.61
C1orf109-206ENST00000477060 CC2D2AQ9P2K1 1620 aa31.28■■■□□ 2.6
C1orf109-206ENST00000477060 CECR2Q9BXF3 1484 aa31.14■■■□□ 2.58
C1orf109-206ENST00000477060 SMARCA4P51532 1647 aa30.51■■■□□ 2.48
C1orf109-206ENST00000477060 NCAPD3P42695 1498 aa30.48■■■□□ 2.47
C1orf109-206ENST00000477060 BAZ1AQ9NRL2 1556 aaPredicted RBP30.45■■■□□ 2.46
C1orf109-206ENST00000477060 ATAD2BQ9ULI0 1458 aa30.44■■■□□ 2.46
C1orf109-206ENST00000477060 SMARCA2P51531 1590 aa30.41■■■□□ 2.46
C1orf109-206ENST00000477060 HMGXB3Q12766 1538 aa30.31■■■□□ 2.44
C1orf109-206ENST00000477060 PEG3Q9GZU2 1588 aa30.22■■■□□ 2.43
C1orf109-206ENST00000477060 MROH2BQ7Z745 1585 aa30.2■■■□□ 2.43
C1orf109-206ENST00000477060 BAZ1BQ9UIG0 1483 aaKnown RBP30.19■■■□□ 2.42
C1orf109-206ENST00000477060 ERCC6Q03468 1493 aa29.9■■■□□ 2.38
C1orf109-206ENST00000477060 WIZO95785 1651 aa29.85■■■□□ 2.37
C1orf109-206ENST00000477060 NESP48681 1621 aa29.82■■■□□ 2.36
C1orf109-206ENST00000477060 RSF1Q96T23 1441 aaPredicted RBP29.75■■■□□ 2.35
C1orf109-206ENST00000477060 LAMC3Q9Y6N6 1575 aa29.74■■■□□ 2.35
C1orf109-206ENST00000477060 CUX2O14529 1486 aa29.7■■■□□ 2.35
C1orf109-206ENST00000477060 CADPSQ9ULU8 1353 aa29.58■■■□□ 2.33
C1orf109-206ENST00000477060 PDS5BQ9NTI5 1447 aa29.57■■■□□ 2.32
C1orf109-206ENST00000477060 TOP2AP11388 1531 aaKnown RBP29.55■■■□□ 2.32
C1orf109-206ENST00000477060 KIF21AQ7Z4S6 1674 aa29.47■■■□□ 2.31
C1orf109-206ENST00000477060 THOC2Q8NI27 1593 aaKnown RBP29.46■■■□□ 2.31
C1orf109-206ENST00000477060 CFTRP13569 1480 aa29.32■■■□□ 2.28
C1orf109-206ENST00000477060 MRC2Q9UBG0 1479 aa29.28■■■□□ 2.28
C1orf109-206ENST00000477060 CEP164Q9UPV0 1460 aa29.25■■■□□ 2.27
C1orf109-206ENST00000477060 FANCD2Q9BXW9 1451 aa29.23■■■□□ 2.27
C1orf109-206ENST00000477060 CCDC88BA6NC98 1476 aa29.19■■■□□ 2.26
C1orf109-206ENST00000477060 WDR62O43379 1518 aa29.18■■■□□ 2.26
C1orf109-206ENST00000477060 DNAJC5Q9H3Z4 198 aa29.17■■■□□ 2.26
C1orf109-206ENST00000477060 PRDM2Q13029 1718 aa29.06■■■□□ 2.24
C1orf109-206ENST00000477060 URB2Q14146 1524 aaKnown RBP28.94■■■□□ 2.22
C1orf109-206ENST00000477060 ABCC8Q09428 1581 aa28.75■■■□□ 2.19
C1orf109-206ENST00000477060 SUPT5HO00267 1087 aaKnown RBP28.74■■■□□ 2.19
C1orf109-206ENST00000477060 TOPBP1Q92547 1522 aa28.72■■■□□ 2.19
C1orf109-206ENST00000477060 DNMBPQ6XZF7 1577 aa28.67■■■□□ 2.18
C1orf109-206ENST00000477060 IFT140Q96RY7 1462 aa28.66■■■□□ 2.18
C1orf109-206ENST00000477060 ZNF608Q9ULD9 1512 aaPredicted RBP28.51■■■□□ 2.15
C1orf109-206ENST00000477060 POLA1P09884 1462 aaPredicted RBP28.46■■■□□ 2.15
C1orf109-206ENST00000477060 TARBP1Q13395 1621 aaKnown RBP28.43■■■□□ 2.14
C1orf109-206ENST00000477060 OSCARQ8IYS5 282 aa28.4■■■□□ 2.14
C1orf109-206ENST00000477060 EIF4G3O43432 1585 aaKnown RBP28.4■■■□□ 2.14
C1orf109-206ENST00000477060 CUX1P39880 1505 aa28.37■■■□□ 2.13
C1orf109-206ENST00000477060 SOGA1O94964 1423 aa28.35■■■□□ 2.13
C1orf109-206ENST00000477060 FGD5Q6ZNL6 1462 aa28.34■■■□□ 2.13
C1orf109-206ENST00000477060 RAD54L2Q9Y4B4 1467 aa28.32■■■□□ 2.12
C1orf109-206ENST00000477060 AQRO60306 1485 aaKnown RBP eCLIP28.31■■■□□ 2.125e-6■■■□□ 16.9
C1orf109-206ENST00000477060 WDR97A6NE52 1622 aa28.23■■■□□ 2.11
C1orf109-206ENST00000477060 TDRD9Q8NDG6 1382 aaKnown RBP28.22■■■□□ 2.11
C1orf109-206ENST00000477060 CHD1O14646 1710 aa28.09■■■□□ 2.09
C1orf109-206ENST00000477060 WRNQ14191 1432 aaPredicted RBP eCLIP28.09■■■□□ 2.09
C1orf109-206ENST00000477060 FBLN2P98095 1184 aa28.08■■■□□ 2.09
C1orf109-206ENST00000477060 GRIN2BQ13224 1484 aa28.07■■■□□ 2.08
C1orf109-206ENST00000477060 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
C1orf109-206ENST00000477060 SNAPC4Q5SXM2 1469 aa28.06■■■□□ 2.08
C1orf109-206ENST00000477060 TOP2BQ02880 1626 aa28.05■■■□□ 2.08
C1orf109-206ENST00000477060 ABCA10Q8WWZ4 1543 aa28.05■■■□□ 2.08
C1orf109-206ENST00000477060 BIVM-ERCC5R4GMW8 1640 aa28.04■■■□□ 2.08
C1orf109-206ENST00000477060 MAGI1Q96QZ7 1491 aaPredicted RBP28.03■■■□□ 2.08
C1orf109-206ENST00000477060 GAPVD1Q14C86 1478 aa28.02■■■□□ 2.08
C1orf109-206ENST00000477060 SYNJ1O43426 1573 aa28■■■□□ 2.07
C1orf109-206ENST00000477060 ABCA5Q8WWZ7 1642 aa27.96■■■□□ 2.07
C1orf109-206ENST00000477060 CHMP7Q8WUX9 453 aaPredicted RBP27.96■■■□□ 2.07
C1orf109-206ENST00000477060 PBRM1Q86U86 1689 aa27.96■■■□□ 2.07
C1orf109-206ENST00000477060 RIMBP3CA6NJZ7 1639 aa27.96■■■□□ 2.07
C1orf109-206ENST00000477060 RIMBP3BA6NNM3 1639 aa27.96■■■□□ 2.07
C1orf109-206ENST00000477060 RIMBP3Q9UFD9 1639 aa27.96■■■□□ 2.07
C1orf109-206ENST00000477060 ARHGEF11O15085 1522 aa27.92■■■□□ 2.06
C1orf109-206ENST00000477060 SYNJ2O15056 1496 aa27.92■■■□□ 2.06
C1orf109-206ENST00000477060 CLASP1Q7Z460 1538 aa27.8■■■□□ 2.04
C1orf109-206ENST00000477060 ADAMTS12P58397 1594 aa27.73■■■□□ 2.03
C1orf109-206ENST00000477060 ERICH3Q5RHP9 1530 aa27.72■■■□□ 2.03
C1orf109-206ENST00000477060 GRIN2AQ12879 1464 aa27.7■■■□□ 2.02
C1orf109-206ENST00000477060 FHAD1B1AJZ9 1412 aa27.69■■■□□ 2.02
C1orf109-206ENST00000477060 CYB5RLQ6IPT4 315 aa27.69■■■□□ 2.02
C1orf109-206ENST00000477060 ARAP1Q96P48 1450 aa27.67■■■□□ 2.02
C1orf109-206ENST00000477060 NUP160Q12769 1436 aa27.58■■■□□ 2.01
C1orf109-206ENST00000477060 CEP170Q5SW79 1584 aa27.55■■■□□ 2
C1orf109-206ENST00000477060 KIF27Q86VH2 1401 aa27.54■■■□□ 2
C1orf109-206ENST00000477060 IGF1RP08069 1367 aa27.44■■□□□ 1.98
C1orf109-206ENST00000477060 CUL7Q14999 1698 aa27.41■■□□□ 1.98
C1orf109-206ENST00000477060 SHROOM2Q13796 1616 aa27.4■■□□□ 1.98
C1orf109-206ENST00000477060 ERCC6L2Q5T890 1561 aa27.35■■□□□ 1.97
C1orf109-206ENST00000477060 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
C1orf109-206ENST00000477060 JPH4Q96JJ6 628 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms