RNA–Protein interactions for RNA: ENST00000477015.5

BDH1-213, Transcript of 3-hydroxybutyrate dehydrogenase 1, humanhuman

TSL 2

Gene BDH1, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDH1-213ENST00000477015 NISCHQ9Y2I1 1504 aa25.82■■□□□ 1.72
BDH1-213ENST00000477015 ABCC9O60706 1549 aa23.37■■□□□ 1.33
BDH1-213ENST00000477015 CCDC180Q9P1Z9 1646 aa23.16■■□□□ 1.3
BDH1-213ENST00000477015 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
BDH1-213ENST00000477015 DNAJC5BQ9UF47 199 aa22.03■■□□□ 1.12
BDH1-213ENST00000477015 DCAF8L2P0C7V8 631 aa22.01■■□□□ 1.11
BDH1-213ENST00000477015 NACADO15069 1562 aa21.92■■□□□ 1.1
BDH1-213ENST00000477015 PABPN1Q86U42 306 aaKnown RBP eCLIP21.77■■□□□ 1.08
BDH1-213ENST00000477015 UNC13AQ9UPW8 1703 aa21.59■■□□□ 1.05
BDH1-213ENST00000477015 MYO15BQ96JP2 1530 aa21.53■■□□□ 1.04
BDH1-213ENST00000477015 BICRAQ9NZM4 1560 aa21.46■■□□□ 1.03
BDH1-213ENST00000477015 ZCCHC6Q5VYS8 1495 aaKnown RBP21.38■■□□□ 1.01
BDH1-213ENST00000477015 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
BDH1-213ENST00000477015 SCRIBQ14160 1630 aa21.22■□□□□ 0.99
BDH1-213ENST00000477015 SHROOM4Q9ULL8 1493 aa21.11■□□□□ 0.97
BDH1-213ENST00000477015 CC2D2AQ9P2K1 1620 aa21.04■□□□□ 0.96
BDH1-213ENST00000477015 CECR2Q9BXF3 1484 aa21.02■□□□□ 0.96
BDH1-213ENST00000477015 EIF4G1Q04637 1599 aaKnown RBP20.97■□□□□ 0.95
BDH1-213ENST00000477015 DNAJC5Q9H3Z4 198 aa20.3■□□□□ 0.84
BDH1-213ENST00000477015 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
BDH1-213ENST00000477015 ATAD2BQ9ULI0 1458 aa20.2■□□□□ 0.82
BDH1-213ENST00000477015 ERCC6Q03468 1493 aa20.19■□□□□ 0.82
BDH1-213ENST00000477015 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
BDH1-213ENST00000477015 SMARCA2P51531 1590 aa20.13■□□□□ 0.81
BDH1-213ENST00000477015 HMGXB3Q12766 1538 aa20.09■□□□□ 0.81
BDH1-213ENST00000477015 CUX2O14529 1486 aa20.09■□□□□ 0.81
BDH1-213ENST00000477015 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
BDH1-213ENST00000477015 BAZ1AQ9NRL2 1556 aaPredicted RBP20.05■□□□□ 0.8
BDH1-213ENST00000477015 NESP48681 1621 aa20.04■□□□□ 0.8
BDH1-213ENST00000477015 MROH2BQ7Z745 1585 aa19.92■□□□□ 0.78
BDH1-213ENST00000477015 PEG3Q9GZU2 1588 aa19.91■□□□□ 0.78
BDH1-213ENST00000477015 LAMC3Q9Y6N6 1575 aa19.81■□□□□ 0.76
BDH1-213ENST00000477015 THOC2Q8NI27 1593 aaKnown RBP19.79■□□□□ 0.76
BDH1-213ENST00000477015 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
BDH1-213ENST00000477015 PDS5BQ9NTI5 1447 aa19.73■□□□□ 0.75
BDH1-213ENST00000477015 WIZO95785 1651 aa19.69■□□□□ 0.74
BDH1-213ENST00000477015 CADPSQ9ULU8 1353 aa19.66■□□□□ 0.74
BDH1-213ENST00000477015 MRC2Q9UBG0 1479 aa19.58■□□□□ 0.72
BDH1-213ENST00000477015 WDR62O43379 1518 aa19.51■□□□□ 0.71
BDH1-213ENST00000477015 CEP164Q9UPV0 1460 aa19.5■□□□□ 0.71
BDH1-213ENST00000477015 RSF1Q96T23 1441 aaPredicted RBP19.47■□□□□ 0.71
BDH1-213ENST00000477015 FANCD2Q9BXW9 1451 aa19.47■□□□□ 0.71
BDH1-213ENST00000477015 TOP2AP11388 1531 aaKnown RBP19.41■□□□□ 0.7
BDH1-213ENST00000477015 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
BDH1-213ENST00000477015 CFTRP13569 1480 aa19.4■□□□□ 0.7
BDH1-213ENST00000477015 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
BDH1-213ENST00000477015 CCDC88BA6NC98 1476 aa19.21■□□□□ 0.67
BDH1-213ENST00000477015 OSCARQ8IYS5 282 aa19.2■□□□□ 0.66
BDH1-213ENST00000477015 PRDM2Q13029 1718 aa19.17■□□□□ 0.66
BDH1-213ENST00000477015 ZNF608Q9ULD9 1512 aaPredicted RBP19.1■□□□□ 0.65
BDH1-213ENST00000477015 IFT140Q96RY7 1462 aa19.09■□□□□ 0.65
BDH1-213ENST00000477015 TOPBP1Q92547 1522 aa19.07■□□□□ 0.64
BDH1-213ENST00000477015 DNMBPQ6XZF7 1577 aa18.99■□□□□ 0.63
BDH1-213ENST00000477015 ABCC8Q09428 1581 aa18.98■□□□□ 0.63
BDH1-213ENST00000477015 EIF4G3O43432 1585 aaKnown RBP18.98■□□□□ 0.63
BDH1-213ENST00000477015 RIMBP3CA6NJZ7 1639 aa18.95■□□□□ 0.62
BDH1-213ENST00000477015 RIMBP3BA6NNM3 1639 aa18.95■□□□□ 0.62
BDH1-213ENST00000477015 RIMBP3Q9UFD9 1639 aa18.95■□□□□ 0.62
BDH1-213ENST00000477015 AQRO60306 1485 aaKnown RBP eCLIP18.93■□□□□ 0.62
BDH1-213ENST00000477015 FBLN2P98095 1184 aa18.9■□□□□ 0.62
BDH1-213ENST00000477015 ARHGEF11O15085 1522 aa18.89■□□□□ 0.61
BDH1-213ENST00000477015 POLA1P09884 1462 aaPredicted RBP18.88■□□□□ 0.61
BDH1-213ENST00000477015 TARBP1Q13395 1621 aaKnown RBP18.88■□□□□ 0.61
BDH1-213ENST00000477015 RAD54L2Q9Y4B4 1467 aa18.85■□□□□ 0.61
BDH1-213ENST00000477015 CHD1O14646 1710 aa18.84■□□□□ 0.61
BDH1-213ENST00000477015 CYB5RLQ6IPT4 315 aa18.81■□□□□ 0.6
BDH1-213ENST00000477015 SOGA1O94964 1423 aa18.81■□□□□ 0.6
BDH1-213ENST00000477015 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
BDH1-213ENST00000477015 FGD5Q6ZNL6 1462 aa18.77■□□□□ 0.6
BDH1-213ENST00000477015 SNAPC4Q5SXM2 1469 aa18.73■□□□□ 0.59
BDH1-213ENST00000477015 CUX1P39880 1505 aa18.72■□□□□ 0.59
BDH1-213ENST00000477015 ARAP1Q96P48 1450 aa18.7■□□□□ 0.58
BDH1-213ENST00000477015 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
BDH1-213ENST00000477015 CHMP7Q8WUX9 453 aaPredicted RBP18.69■□□□□ 0.58
BDH1-213ENST00000477015 TRHP20396 242 aaPredicted RBP18.68■□□□□ 0.58
BDH1-213ENST00000477015 GRIN2BQ13224 1484 aa18.64■□□□□ 0.57
BDH1-213ENST00000477015 WDR97A6NE52 1622 aa18.63■□□□□ 0.57
BDH1-213ENST00000477015 MAGI1Q96QZ7 1491 aaPredicted RBP18.62■□□□□ 0.57
BDH1-213ENST00000477015 SYNJ1O43426 1573 aa18.6■□□□□ 0.57
BDH1-213ENST00000477015 CLASP1Q7Z460 1538 aa18.59■□□□□ 0.57
BDH1-213ENST00000477015 SYNJ2O15056 1496 aa18.58■□□□□ 0.56
BDH1-213ENST00000477015 GAPVD1Q14C86 1478 aa18.58■□□□□ 0.56
BDH1-213ENST00000477015 PBRM1Q86U86 1689 aa18.56■□□□□ 0.56
BDH1-213ENST00000477015 ABCA10Q8WWZ4 1543 aa18.5■□□□□ 0.55
BDH1-213ENST00000477015 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
BDH1-213ENST00000477015 WRNQ14191 1432 aaPredicted RBP eCLIP18.45■□□□□ 0.54
BDH1-213ENST00000477015 GRIN2AQ12879 1464 aa18.4■□□□□ 0.54
BDH1-213ENST00000477015 ADAMTS12P58397 1594 aa18.38■□□□□ 0.53
BDH1-213ENST00000477015 TOP2BQ02880 1626 aa18.38■□□□□ 0.53
BDH1-213ENST00000477015 BIVM-ERCC5R4GMW8 1640 aa18.37■□□□□ 0.53
BDH1-213ENST00000477015 ERCC6L2Q5T890 1561 aa18.35■□□□□ 0.53
BDH1-213ENST00000477015 CEP170Q5SW79 1584 aa18.34■□□□□ 0.53
BDH1-213ENST00000477015 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
BDH1-213ENST00000477015 NUP160Q12769 1436 aa18.31■□□□□ 0.52
BDH1-213ENST00000477015 ERICH3Q5RHP9 1530 aa18.27■□□□□ 0.51
BDH1-213ENST00000477015 SHROOM2Q13796 1616 aa18.21■□□□□ 0.51
BDH1-213ENST00000477015 PRG4Q92954 1404 aaPredicted RBP18.2■□□□□ 0.5
BDH1-213ENST00000477015 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
BDH1-213ENST00000477015 JPH4Q96JJ6 628 aa18.15■□□□□ 0.5
BDH1-213ENST00000477015 RUSC2Q8N2Y8 1516 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms