RNA–Protein interactions for RNA: ENST00000476825.2

SPTAN1-207, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-207ENST00000476825 NISCHQ9Y2I1 1504 aa22.03■■□□□ 1.12
SPTAN1-207ENST00000476825 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
SPTAN1-207ENST00000476825 AEBP2Q6ZN18 517 aaPredicted RBP18.87■□□□□ 0.61
SPTAN1-207ENST00000476825 ABCC9O60706 1549 aa18.74■□□□□ 0.59
SPTAN1-207ENST00000476825 ZCCHC6Q5VYS8 1495 aaKnown RBP18.45■□□□□ 0.54
SPTAN1-207ENST00000476825 DCAF1Q9Y4B6 1507 aa18.29■□□□□ 0.52
SPTAN1-207ENST00000476825 MYO15BQ96JP2 1530 aa18.27■□□□□ 0.51
SPTAN1-207ENST00000476825 NACADO15069 1562 aa18.26■□□□□ 0.51
SPTAN1-207ENST00000476825 RB1CC1Q8TDY2 1594 aa18.22■□□□□ 0.51
SPTAN1-207ENST00000476825 UNC13AQ9UPW8 1703 aa18.02■□□□□ 0.48
SPTAN1-207ENST00000476825 DCAF8L2P0C7V8 631 aa18■□□□□ 0.47
SPTAN1-207ENST00000476825 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
SPTAN1-207ENST00000476825 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
SPTAN1-207ENST00000476825 BICRAQ9NZM4 1560 aa17.74■□□□□ 0.43
SPTAN1-207ENST00000476825 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
SPTAN1-207ENST00000476825 PABPN1Q86U42 306 aaKnown RBP eCLIP17.44■□□□□ 0.38
SPTAN1-207ENST00000476825 EIF4G1Q04637 1599 aaKnown RBP17.2■□□□□ 0.34
SPTAN1-207ENST00000476825 CECR2Q9BXF3 1484 aa17.11■□□□□ 0.33
SPTAN1-207ENST00000476825 SMARCA4P51532 1647 aa17.1■□□□□ 0.33
SPTAN1-207ENST00000476825 CC2D2AQ9P2K1 1620 aa17.07■□□□□ 0.32
SPTAN1-207ENST00000476825 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
SPTAN1-207ENST00000476825 MROH2BQ7Z745 1585 aa16.99■□□□□ 0.31
SPTAN1-207ENST00000476825 PEG3Q9GZU2 1588 aa16.95■□□□□ 0.3
SPTAN1-207ENST00000476825 DNAJC5BQ9UF47 199 aa16.91■□□□□ 0.3
SPTAN1-207ENST00000476825 SMARCA2P51531 1590 aa16.87■□□□□ 0.29
SPTAN1-207ENST00000476825 WIZO95785 1651 aa16.87■□□□□ 0.29
SPTAN1-207ENST00000476825 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
SPTAN1-207ENST00000476825 HMGXB3Q12766 1538 aa16.83■□□□□ 0.28
SPTAN1-207ENST00000476825 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.28
SPTAN1-207ENST00000476825 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
SPTAN1-207ENST00000476825 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
SPTAN1-207ENST00000476825 TOP2AP11388 1531 aaKnown RBP16.68■□□□□ 0.26
SPTAN1-207ENST00000476825 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
SPTAN1-207ENST00000476825 SUPT5HO00267 1087 aaKnown RBP16.41■□□□□ 0.22
SPTAN1-207ENST00000476825 CCDC88BA6NC98 1476 aa16.41■□□□□ 0.22
SPTAN1-207ENST00000476825 LAMC3Q9Y6N6 1575 aa16.38■□□□□ 0.21
SPTAN1-207ENST00000476825 NESP48681 1621 aa16.34■□□□□ 0.21
SPTAN1-207ENST00000476825 CFTRP13569 1480 aa16.29■□□□□ 0.2
SPTAN1-207ENST00000476825 KIF21AQ7Z4S6 1674 aa16.29■□□□□ 0.2
SPTAN1-207ENST00000476825 CADPSQ9ULU8 1353 aa16.26■□□□□ 0.19
SPTAN1-207ENST00000476825 THOC2Q8NI27 1593 aaKnown RBP16.16■□□□□ 0.18
SPTAN1-207ENST00000476825 PDS5BQ9NTI5 1447 aa16.13■□□□□ 0.17
SPTAN1-207ENST00000476825 FANCD2Q9BXW9 1451 aa16.12■□□□□ 0.17
SPTAN1-207ENST00000476825 CEP164Q9UPV0 1460 aa16.1■□□□□ 0.17
SPTAN1-207ENST00000476825 ERCC6Q03468 1493 aa16.09■□□□□ 0.17
SPTAN1-207ENST00000476825 WDR62O43379 1518 aa16.04■□□□□ 0.16
SPTAN1-207ENST00000476825 MRC2Q9UBG0 1479 aa16.03■□□□□ 0.16
SPTAN1-207ENST00000476825 URB2Q14146 1524 aaKnown RBP16■□□□□ 0.15
SPTAN1-207ENST00000476825 DNMBPQ6XZF7 1577 aa15.98■□□□□ 0.15
SPTAN1-207ENST00000476825 SENP3Q9H4L4 574 aaPredicted RBP15.98■□□□□ 0.15
SPTAN1-207ENST00000476825 BIVM-ERCC5R4GMW8 1640 aa15.95■□□□□ 0.14
SPTAN1-207ENST00000476825 ABCC8Q09428 1581 aa15.95■□□□□ 0.14
SPTAN1-207ENST00000476825 CUX1P39880 1505 aa15.94■□□□□ 0.14
SPTAN1-207ENST00000476825 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
SPTAN1-207ENST00000476825 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
SPTAN1-207ENST00000476825 CUX2O14529 1486 aa15.91■□□□□ 0.14
SPTAN1-207ENST00000476825 TOP2BQ02880 1626 aa15.9■□□□□ 0.14
SPTAN1-207ENST00000476825 DNAJC5Q9H3Z4 198 aa15.86■□□□□ 0.13
SPTAN1-207ENST00000476825 PHF23Q9BUL5 403 aaPredicted RBP15.85■□□□□ 0.13
SPTAN1-207ENST00000476825 WDR97A6NE52 1622 aa15.85■□□□□ 0.13
SPTAN1-207ENST00000476825 WRNQ14191 1432 aaPredicted RBP eCLIP15.85■□□□□ 0.13
SPTAN1-207ENST00000476825 TARBP1Q13395 1621 aaKnown RBP15.83■□□□□ 0.12
SPTAN1-207ENST00000476825 POLA1P09884 1462 aaPredicted RBP15.81■□□□□ 0.12
SPTAN1-207ENST00000476825 FGD5Q6ZNL6 1462 aa15.81■□□□□ 0.12
SPTAN1-207ENST00000476825 IFT140Q96RY7 1462 aa15.73■□□□□ 0.11
SPTAN1-207ENST00000476825 EIF4G3O43432 1585 aaKnown RBP15.71■□□□□ 0.11
SPTAN1-207ENST00000476825 RAD54L2Q9Y4B4 1467 aa15.7■□□□□ 0.1
SPTAN1-207ENST00000476825 ABCA5Q8WWZ7 1642 aa15.68■□□□□ 0.1
SPTAN1-207ENST00000476825 ABCA10Q8WWZ4 1543 aa15.68■□□□□ 0.1
SPTAN1-207ENST00000476825 ZNF608Q9ULD9 1512 aaPredicted RBP15.67■□□□□ 0.1
SPTAN1-207ENST00000476825 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
SPTAN1-207ENST00000476825 SOGA1O94964 1423 aa15.65■□□□□ 0.1
SPTAN1-207ENST00000476825 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.087e-7■■■□□ 17.4
SPTAN1-207ENST00000476825 GAPVD1Q14C86 1478 aa15.52■□□□□ 0.08
SPTAN1-207ENST00000476825 TDRD9Q8NDG6 1382 aaKnown RBP15.52■□□□□ 0.08
SPTAN1-207ENST00000476825 CHD1O14646 1710 aa15.51■□□□□ 0.07
SPTAN1-207ENST00000476825 ADAMTS12P58397 1594 aa15.5■□□□□ 0.07
SPTAN1-207ENST00000476825 ERICH3Q5RHP9 1530 aa15.5■□□□□ 0.07
SPTAN1-207ENST00000476825 TRIM41Q8WV44 630 aa15.5■□□□□ 0.07
SPTAN1-207ENST00000476825 GRIN2BQ13224 1484 aa15.49■□□□□ 0.07
SPTAN1-207ENST00000476825 CUL7Q14999 1698 aa15.48■□□□□ 0.07
SPTAN1-207ENST00000476825 RUSC2Q8N2Y8 1516 aa15.47■□□□□ 0.07
SPTAN1-207ENST00000476825 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.07
SPTAN1-207ENST00000476825 MAGI1Q96QZ7 1491 aaPredicted RBP15.46■□□□□ 0.07
SPTAN1-207ENST00000476825 KIF27Q86VH2 1401 aa15.46■□□□□ 0.07
SPTAN1-207ENST00000476825 SYNJ2O15056 1496 aa15.39■□□□□ 0.05
SPTAN1-207ENST00000476825 EEA1Q15075 1411 aa15.36■□□□□ 0.05
SPTAN1-207ENST00000476825 IGF1RP08069 1367 aa15.36■□□□□ 0.05
SPTAN1-207ENST00000476825 FHAD1B1AJZ9 1412 aa15.34■□□□□ 0.05
SPTAN1-207ENST00000476825 GRIN2AQ12879 1464 aa15.33■□□□□ 0.04
SPTAN1-207ENST00000476825 CEP170Q5SW79 1584 aa15.31■□□□□ 0.04
SPTAN1-207ENST00000476825 KIF21BO75037 1637 aa15.31■□□□□ 0.04
SPTAN1-207ENST00000476825 PRXQ9BXM0 1461 aa15.3■□□□□ 0.04
SPTAN1-207ENST00000476825 CTTNBP2Q8WZ74 1663 aa15.29■□□□□ 0.04
SPTAN1-207ENST00000476825 CLASP1Q7Z460 1538 aa15.29■□□□□ 0.04
SPTAN1-207ENST00000476825 NUP160Q12769 1436 aa15.26■□□□□ 0.03
SPTAN1-207ENST00000476825 CARMIL1Q5VZK9 1371 aa15.25■□□□□ 0.03
SPTAN1-207ENST00000476825 RAPGEF2Q9Y4G8 1499 aa15.25■□□□□ 0.03
SPTAN1-207ENST00000476825 SHROOM2Q13796 1616 aa15.22■□□□□ 0.03
SPTAN1-207ENST00000476825 CSRNP3Q8WYN3 585 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms