RNA–Protein interactions for RNA: ENST00000476766.5

TWNK-205, Transcript of twinkle mtDNA helicase, humanhuman

TSL 3

Gene TWNK, Length 838 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-205ENST00000476766 NISCHQ9Y2I1 1504 aa31.9■■■□□ 2.7
TWNK-205ENST00000476766 CCDC180Q9P1Z9 1646 aa27.86■■■□□ 2.05
TWNK-205ENST00000476766 ZCCHC6Q5VYS8 1495 aaKnown RBP26.76■■□□□ 1.87
TWNK-205ENST00000476766 DCAF1Q9Y4B6 1507 aa26.46■■□□□ 1.83
TWNK-205ENST00000476766 DCAF8L2P0C7V8 631 aa26.36■■□□□ 1.81
TWNK-205ENST00000476766 ABCC9O60706 1549 aa26.33■■□□□ 1.81
TWNK-205ENST00000476766 MYO15BQ96JP2 1530 aa26.21■■□□□ 1.79
TWNK-205ENST00000476766 NACADO15069 1562 aa26.02■■□□□ 1.76
TWNK-205ENST00000476766 SHROOM4Q9ULL8 1493 aa25.83■■□□□ 1.73
TWNK-205ENST00000476766 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
TWNK-205ENST00000476766 SCRIBQ14160 1630 aa25.49■■□□□ 1.67
TWNK-205ENST00000476766 UNC13AQ9UPW8 1703 aa25.06■■□□□ 1.6
TWNK-205ENST00000476766 SUPT5HO00267 1087 aaKnown RBP24.91■■□□□ 1.58
TWNK-205ENST00000476766 BICRAQ9NZM4 1560 aa24.9■■□□□ 1.58
TWNK-205ENST00000476766 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.57
TWNK-205ENST00000476766 CECR2Q9BXF3 1484 aa24.71■■□□□ 1.55
TWNK-205ENST00000476766 RSF1Q96T23 1441 aaPredicted RBP24.71■■□□□ 1.55
TWNK-205ENST00000476766 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
TWNK-205ENST00000476766 MROH2BQ7Z745 1585 aa24.58■■□□□ 1.52
TWNK-205ENST00000476766 SMARCA4P51532 1647 aa24.5■■□□□ 1.51
TWNK-205ENST00000476766 WIZO95785 1651 aa24.33■■□□□ 1.49
TWNK-205ENST00000476766 DNAJC5BQ9UF47 199 aa24.32■■□□□ 1.48
TWNK-205ENST00000476766 PEG3Q9GZU2 1588 aa24.26■■□□□ 1.47
TWNK-205ENST00000476766 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.46
TWNK-205ENST00000476766 SMARCA2P51531 1590 aa24.19■■□□□ 1.46
TWNK-205ENST00000476766 TOP2AP11388 1531 aaKnown RBP24.17■■□□□ 1.46
TWNK-205ENST00000476766 ATAD2BQ9ULI0 1458 aa24.16■■□□□ 1.46
TWNK-205ENST00000476766 NCAPD3P42695 1498 aa24.02■■□□□ 1.44
TWNK-205ENST00000476766 BAZ1BQ9UIG0 1483 aaKnown RBP24.02■■□□□ 1.44
TWNK-205ENST00000476766 HMGXB3Q12766 1538 aa23.94■■□□□ 1.42
TWNK-205ENST00000476766 CCDC88BA6NC98 1476 aa23.92■■□□□ 1.42
TWNK-205ENST00000476766 CHIC1Q5VXU3 224 aa23.85■■□□□ 1.41
TWNK-205ENST00000476766 CC2D2AQ9P2K1 1620 aa23.84■■□□□ 1.41
TWNK-205ENST00000476766 TRIM41Q8WV44 630 aa23.52■■□□□ 1.36
TWNK-205ENST00000476766 CFTRP13569 1480 aa23.43■■□□□ 1.34
TWNK-205ENST00000476766 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
TWNK-205ENST00000476766 ABCC8Q09428 1581 aa23.28■■□□□ 1.32
TWNK-205ENST00000476766 WRNQ14191 1432 aaPredicted RBP eCLIP23.28■■□□□ 1.32
TWNK-205ENST00000476766 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
TWNK-205ENST00000476766 LAMC3Q9Y6N6 1575 aa23.18■■□□□ 1.3
TWNK-205ENST00000476766 FANCD2Q9BXW9 1451 aa23.08■■□□□ 1.29
TWNK-205ENST00000476766 SYNJ1O43426 1573 aa23.08■■□□□ 1.29
TWNK-205ENST00000476766 TOP2BQ02880 1626 aa23.07■■□□□ 1.28
TWNK-205ENST00000476766 PDS5BQ9NTI5 1447 aa23.07■■□□□ 1.28
TWNK-205ENST00000476766 NESP48681 1621 aa23.05■■□□□ 1.28
TWNK-205ENST00000476766 BIVM-ERCC5R4GMW8 1640 aa23.04■■□□□ 1.28
TWNK-205ENST00000476766 EEA1Q15075 1411 aa23.02■■□□□ 1.28
TWNK-205ENST00000476766 CUX1P39880 1505 aa22.99■■□□□ 1.27
TWNK-205ENST00000476766 FAM9AQ8IZU1 332 aaPredicted RBP22.96■■□□□ 1.27
TWNK-205ENST00000476766 CEP164Q9UPV0 1460 aa22.96■■□□□ 1.27
TWNK-205ENST00000476766 SOGA1O94964 1423 aa22.9■■□□□ 1.26
TWNK-205ENST00000476766 LOC105371045A0A1W2PR82 267 aa22.87■■□□□ 1.25
TWNK-205ENST00000476766 DNMBPQ6XZF7 1577 aa22.86■■□□□ 1.25
TWNK-205ENST00000476766 CSRNP3Q8WYN3 585 aa22.86■■□□□ 1.25
TWNK-205ENST00000476766 TOPBP1Q92547 1522 aa22.81■■□□□ 1.24
TWNK-205ENST00000476766 FGD5Q6ZNL6 1462 aa22.78■■□□□ 1.24
TWNK-205ENST00000476766 RUSC2Q8N2Y8 1516 aa22.77■■□□□ 1.24
TWNK-205ENST00000476766 KIF21AQ7Z4S6 1674 aa22.76■■□□□ 1.23
TWNK-205ENST00000476766 KIF27Q86VH2 1401 aa22.75■■□□□ 1.23
TWNK-205ENST00000476766 URB2Q14146 1524 aaKnown RBP22.75■■□□□ 1.23
TWNK-205ENST00000476766 ERCC6Q03468 1493 aa22.71■■□□□ 1.23
TWNK-205ENST00000476766 MRC2Q9UBG0 1479 aa22.71■■□□□ 1.23
TWNK-205ENST00000476766 POLA1P09884 1462 aaPredicted RBP22.68■■□□□ 1.22
TWNK-205ENST00000476766 CUX2O14529 1486 aa22.66■■□□□ 1.22
TWNK-205ENST00000476766 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
TWNK-205ENST00000476766 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
TWNK-205ENST00000476766 KIF21BO75037 1637 aa22.6■■□□□ 1.21
TWNK-205ENST00000476766 RAD54L2Q9Y4B4 1467 aa22.57■■□□□ 1.2
TWNK-205ENST00000476766 WDR62O43379 1518 aa22.57■■□□□ 1.2
TWNK-205ENST00000476766 TNIKQ9UKE5 1360 aa22.56■■□□□ 1.2
TWNK-205ENST00000476766 EHMT2Q96KQ7 1210 aa22.55■■□□□ 1.2
TWNK-205ENST00000476766 PRXQ9BXM0 1461 aa22.54■■□□□ 1.2
TWNK-205ENST00000476766 IGF1RP08069 1367 aa22.53■■□□□ 1.2
TWNK-205ENST00000476766 UBTFP17480 764 aaKnown RBP22.53■■□□□ 1.2
TWNK-205ENST00000476766 ERICH3Q5RHP9 1530 aa22.5■■□□□ 1.19
TWNK-205ENST00000476766 IFT140Q96RY7 1462 aa22.46■■□□□ 1.19
TWNK-205ENST00000476766 THOC2Q8NI27 1593 aaKnown RBP22.45■■□□□ 1.18
TWNK-205ENST00000476766 WDR97A6NE52 1622 aa22.45■■□□□ 1.18
TWNK-205ENST00000476766 TARBP1Q13395 1621 aaKnown RBP22.44■■□□□ 1.18
TWNK-205ENST00000476766 RAPGEF2Q9Y4G8 1499 aa22.44■■□□□ 1.18
TWNK-205ENST00000476766 CARMIL1Q5VZK9 1371 aa22.43■■□□□ 1.18
TWNK-205ENST00000476766 TDRD9Q8NDG6 1382 aaKnown RBP22.4■■□□□ 1.18
TWNK-205ENST00000476766 GAPVD1Q14C86 1478 aa22.4■■□□□ 1.18
TWNK-205ENST00000476766 DNAJC5Q9H3Z4 198 aa22.39■■□□□ 1.17
TWNK-205ENST00000476766 ABCA5Q8WWZ7 1642 aa22.38■■□□□ 1.17
TWNK-205ENST00000476766 CEP162Q5TB80 1403 aa22.35■■□□□ 1.17
TWNK-205ENST00000476766 CUL7Q14999 1698 aa22.33■■□□□ 1.17
TWNK-205ENST00000476766 GRIN2BQ13224 1484 aa22.27■■□□□ 1.16
TWNK-205ENST00000476766 AQRO60306 1485 aaKnown RBP eCLIP22.25■■□□□ 1.158e-7■■■□□ 16.1
TWNK-205ENST00000476766 CLIP1P30622 1438 aa22.23■■□□□ 1.15
TWNK-205ENST00000476766 ZNF608Q9ULD9 1512 aaPredicted RBP22.21■■□□□ 1.15
TWNK-205ENST00000476766 FHAD1B1AJZ9 1412 aa22.2■■□□□ 1.14
TWNK-205ENST00000476766 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
TWNK-205ENST00000476766 EIF4G3O43432 1585 aaKnown RBP22.12■■□□□ 1.13
TWNK-205ENST00000476766 ADAMTS12P58397 1594 aa22.09■■□□□ 1.13
TWNK-205ENST00000476766 MAGI1Q96QZ7 1491 aaPredicted RBP22.09■■□□□ 1.13
TWNK-205ENST00000476766 SNAPC4Q5SXM2 1469 aa22.05■■□□□ 1.12
TWNK-205ENST00000476766 RANGAP1P46060 587 aaPredicted RBP22.04■■□□□ 1.12
TWNK-205ENST00000476766 VPS8Q8N3P4 1428 aa22.03■■□□□ 1.12
TWNK-205ENST00000476766 CTTNBP2Q8WZ74 1663 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms