RNA–Protein interactions for RNA: ENST00000476760.1

PTK7-212, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2 BASIC

Gene PTK7, Length 902 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-212ENST00000476760 NISCHQ9Y2I1 1504 aa38.22■■■■□ 3.71
PTK7-212ENST00000476760 CCDC180Q9P1Z9 1646 aa33.87■■■■□ 3.01
PTK7-212ENST00000476760 ABCC9O60706 1549 aa32.69■■■□□ 2.82
PTK7-212ENST00000476760 ZCCHC6Q5VYS8 1495 aaKnown RBP31.92■■■□□ 2.7
PTK7-212ENST00000476760 NACADO15069 1562 aa31.73■■■□□ 2.67
PTK7-212ENST00000476760 MYO15BQ96JP2 1530 aa31.68■■■□□ 2.66
PTK7-212ENST00000476760 DCAF1Q9Y4B6 1507 aa31.68■■■□□ 2.66
PTK7-212ENST00000476760 DCAF8L2P0C7V8 631 aa31.67■■■□□ 2.66
PTK7-212ENST00000476760 RB1CC1Q8TDY2 1594 aa31.66■■■□□ 2.66
PTK7-212ENST00000476760 UNC13AQ9UPW8 1703 aa31.03■■■□□ 2.56
PTK7-212ENST00000476760 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
PTK7-212ENST00000476760 BICRAQ9NZM4 1560 aa30.71■■■□□ 2.51
PTK7-212ENST00000476760 PABPN1Q86U42 306 aaKnown RBP eCLIP30.59■■■□□ 2.49
PTK7-212ENST00000476760 SHROOM4Q9ULL8 1493 aa30.42■■■□□ 2.46
PTK7-212ENST00000476760 EIF4G1Q04637 1599 aaKnown RBP29.85■■■□□ 2.37
PTK7-212ENST00000476760 CECR2Q9BXF3 1484 aa29.72■■■□□ 2.35
PTK7-212ENST00000476760 DNAJC5BQ9UF47 199 aa29.68■■■□□ 2.34
PTK7-212ENST00000476760 CC2D2AQ9P2K1 1620 aa29.63■■■□□ 2.33
PTK7-212ENST00000476760 BAZ1AQ9NRL2 1556 aaPredicted RBP29.6■■■□□ 2.33
PTK7-212ENST00000476760 SMARCA4P51532 1647 aa29.6■■■□□ 2.33
PTK7-212ENST00000476760 MROH2BQ7Z745 1585 aa29.46■■■□□ 2.31
PTK7-212ENST00000476760 PEG3Q9GZU2 1588 aa29.32■■■□□ 2.28
PTK7-212ENST00000476760 SMARCA2P51531 1590 aa29.31■■■□□ 2.28
PTK7-212ENST00000476760 ATAD2BQ9ULI0 1458 aa29.31■■■□□ 2.28
PTK7-212ENST00000476760 NCAPD3P42695 1498 aa29.26■■■□□ 2.27
PTK7-212ENST00000476760 RSF1Q96T23 1441 aaPredicted RBP29.25■■■□□ 2.27
PTK7-212ENST00000476760 WIZO95785 1651 aa29.18■■■□□ 2.26
PTK7-212ENST00000476760 HMGXB3Q12766 1538 aa29.16■■■□□ 2.26
PTK7-212ENST00000476760 BAZ1BQ9UIG0 1483 aaKnown RBP29.08■■■□□ 2.25
PTK7-212ENST00000476760 TOP2AP11388 1531 aaKnown RBP28.88■■■□□ 2.21
PTK7-212ENST00000476760 SUPT5HO00267 1087 aaKnown RBP28.7■■■□□ 2.18
PTK7-212ENST00000476760 CCDC88BA6NC98 1476 aa28.52■■■□□ 2.16
PTK7-212ENST00000476760 LAMC3Q9Y6N6 1575 aa28.44■■■□□ 2.14
PTK7-212ENST00000476760 NESP48681 1621 aa28.42■■■□□ 2.14
PTK7-212ENST00000476760 CADPSQ9ULU8 1353 aa28.4■■■□□ 2.14
PTK7-212ENST00000476760 CFTRP13569 1480 aa28.33■■■□□ 2.13
PTK7-212ENST00000476760 PRDM2Q13029 1718 aa28.23■■■□□ 2.11
PTK7-212ENST00000476760 PDS5BQ9NTI5 1447 aa28.19■■■□□ 2.1
PTK7-212ENST00000476760 ERCC6Q03468 1493 aa28.15■■■□□ 2.1
PTK7-212ENST00000476760 KIF21AQ7Z4S6 1674 aa28.14■■■□□ 2.1
PTK7-212ENST00000476760 FANCD2Q9BXW9 1451 aa28.08■■■□□ 2.09
PTK7-212ENST00000476760 CEP164Q9UPV0 1460 aa28.01■■■□□ 2.07
PTK7-212ENST00000476760 THOC2Q8NI27 1593 aaKnown RBP27.94■■■□□ 2.06
PTK7-212ENST00000476760 MRC2Q9UBG0 1479 aa27.89■■■□□ 2.06
PTK7-212ENST00000476760 WDR62O43379 1518 aa27.82■■■□□ 2.04
PTK7-212ENST00000476760 URB2Q14146 1524 aaKnown RBP27.78■■■□□ 2.04
PTK7-212ENST00000476760 CUX2O14529 1486 aa27.76■■■□□ 2.03
PTK7-212ENST00000476760 ABCC8Q09428 1581 aa27.71■■■□□ 2.03
PTK7-212ENST00000476760 DNMBPQ6XZF7 1577 aa27.69■■■□□ 2.02
PTK7-212ENST00000476760 TOPBP1Q92547 1522 aa27.68■■■□□ 2.02
PTK7-212ENST00000476760 CUX1P39880 1505 aa27.62■■■□□ 2.01
PTK7-212ENST00000476760 WRNQ14191 1432 aaPredicted RBP eCLIP27.55■■■□□ 2
PTK7-212ENST00000476760 BIVM-ERCC5R4GMW8 1640 aa27.51■■□□□ 1.99
PTK7-212ENST00000476760 TOP2BQ02880 1626 aa27.49■■□□□ 1.99
PTK7-212ENST00000476760 SYNJ1O43426 1573 aa27.49■■□□□ 1.99
PTK7-212ENST00000476760 POLA1P09884 1462 aaPredicted RBP27.47■■□□□ 1.99
PTK7-212ENST00000476760 FGD5Q6ZNL6 1462 aa27.44■■□□□ 1.98
PTK7-212ENST00000476760 IFT140Q96RY7 1462 aa27.41■■□□□ 1.98
PTK7-212ENST00000476760 TARBP1Q13395 1621 aaKnown RBP27.38■■□□□ 1.97
PTK7-212ENST00000476760 SOGA1O94964 1423 aa27.34■■□□□ 1.97
PTK7-212ENST00000476760 RAD54L2Q9Y4B4 1467 aa27.32■■□□□ 1.96
PTK7-212ENST00000476760 WDR97A6NE52 1622 aa27.27■■□□□ 1.96
PTK7-212ENST00000476760 ZNF608Q9ULD9 1512 aaPredicted RBP27.25■■□□□ 1.95
PTK7-212ENST00000476760 ABCA10Q8WWZ4 1543 aa27.22■■□□□ 1.95
PTK7-212ENST00000476760 EIF4G3O43432 1585 aaKnown RBP27.18■■□□□ 1.94
PTK7-212ENST00000476760 AQRO60306 1485 aaKnown RBP eCLIP27.13■■□□□ 1.93
PTK7-212ENST00000476760 TDRD9Q8NDG6 1382 aaKnown RBP27.12■■□□□ 1.93
PTK7-212ENST00000476760 TRIM41Q8WV44 630 aa27.11■■□□□ 1.93
PTK7-212ENST00000476760 ABCA5Q8WWZ7 1642 aa27.1■■□□□ 1.93
PTK7-212ENST00000476760 CHIC1Q5VXU3 224 aa27.05■■□□□ 1.92
PTK7-212ENST00000476760 GAPVD1Q14C86 1478 aa27.05■■□□□ 1.92
PTK7-212ENST00000476760 PBRM1Q86U86 1689 aa27.01■■□□□ 1.92
PTK7-212ENST00000476760 GRIN2BQ13224 1484 aa27■■□□□ 1.91
PTK7-212ENST00000476760 KIF27Q86VH2 1401 aa26.95■■□□□ 1.9
PTK7-212ENST00000476760 ERICH3Q5RHP9 1530 aa26.9■■□□□ 1.9
PTK7-212ENST00000476760 SNAPC4Q5SXM2 1469 aa26.9■■□□□ 1.9
PTK7-212ENST00000476760 MAGI1Q96QZ7 1491 aaPredicted RBP26.9■■□□□ 1.9
PTK7-212ENST00000476760 RUSC2Q8N2Y8 1516 aa26.82■■□□□ 1.88
PTK7-212ENST00000476760 ADAMTS12P58397 1594 aa26.8■■□□□ 1.88
PTK7-212ENST00000476760 CHD1O14646 1710 aa26.8■■□□□ 1.88
PTK7-212ENST00000476760 IGF1RP08069 1367 aa26.8■■□□□ 1.88
PTK7-212ENST00000476760 SYNJ2O15056 1496 aa26.78■■□□□ 1.88
PTK7-212ENST00000476760 CUL7Q14999 1698 aa26.75■■□□□ 1.87
PTK7-212ENST00000476760 FHAD1B1AJZ9 1412 aa26.74■■□□□ 1.87
PTK7-212ENST00000476760 EEA1Q15075 1411 aa26.7■■□□□ 1.86
PTK7-212ENST00000476760 CHMP7Q8WUX9 453 aaPredicted RBP26.69■■□□□ 1.86
PTK7-212ENST00000476760 FBLN2P98095 1184 aa26.68■■□□□ 1.86
PTK7-212ENST00000476760 GRIN2AQ12879 1464 aa26.65■■□□□ 1.86
PTK7-212ENST00000476760 CARMIL1Q5VZK9 1371 aa26.64■■□□□ 1.86
PTK7-212ENST00000476760 OSCARQ8IYS5 282 aa26.64■■□□□ 1.86
PTK7-212ENST00000476760 CSRNP3Q8WYN3 585 aa26.57■■□□□ 1.84
PTK7-212ENST00000476760 PRXQ9BXM0 1461 aa26.55■■□□□ 1.84
PTK7-212ENST00000476760 NUP160Q12769 1436 aa26.53■■□□□ 1.84
PTK7-212ENST00000476760 RAPGEF2Q9Y4G8 1499 aa26.53■■□□□ 1.84
PTK7-212ENST00000476760 CEP170Q5SW79 1584 aa26.52■■□□□ 1.84
PTK7-212ENST00000476760 FAM9AQ8IZU1 332 aaPredicted RBP26.51■■□□□ 1.83
PTK7-212ENST00000476760 CLASP1Q7Z460 1538 aa26.49■■□□□ 1.83
PTK7-212ENST00000476760 DNAJC5Q9H3Z4 198 aa26.45■■□□□ 1.82
PTK7-212ENST00000476760 KIF21BO75037 1637 aa26.42■■□□□ 1.82
PTK7-212ENST00000476760 KIAA0586Q9BVV6 1533 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms