RNA–Protein interactions for RNA: ENST00000476529.5

LARP4B-207, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 3

Gene LARP4B, Length 613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-207ENST00000476529 NISCHQ9Y2I1 1504 aa36.59■■■■□ 3.45
LARP4B-207ENST00000476529 CCDC180Q9P1Z9 1646 aa32.61■■■□□ 2.81
LARP4B-207ENST00000476529 ABCC9O60706 1549 aa32.38■■■□□ 2.77
LARP4B-207ENST00000476529 RB1CC1Q8TDY2 1594 aa30.94■■■□□ 2.54
LARP4B-207ENST00000476529 NACADO15069 1562 aa30.84■■■□□ 2.53
LARP4B-207ENST00000476529 DCAF8L2P0C7V8 631 aa30.81■■■□□ 2.52
LARP4B-207ENST00000476529 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.48
LARP4B-207ENST00000476529 ZCCHC6Q5VYS8 1495 aaKnown RBP30.38■■■□□ 2.45
LARP4B-207ENST00000476529 DCAF1Q9Y4B6 1507 aa30.27■■■□□ 2.44
LARP4B-207ENST00000476529 PABPN1Q86U42 306 aaKnown RBP eCLIP30.26■■■□□ 2.43
LARP4B-207ENST00000476529 DNAJC5BQ9UF47 199 aa30.2■■■□□ 2.43
LARP4B-207ENST00000476529 UNC13AQ9UPW8 1703 aa30.13■■■□□ 2.41
LARP4B-207ENST00000476529 BICRAQ9NZM4 1560 aa30.03■■■□□ 2.4
LARP4B-207ENST00000476529 SCRIBQ14160 1630 aa29.73■■■□□ 2.35
LARP4B-207ENST00000476529 SHROOM4Q9ULL8 1493 aa29.69■■■□□ 2.34
LARP4B-207ENST00000476529 EIF4G1Q04637 1599 aaKnown RBP29.26■■■□□ 2.28
LARP4B-207ENST00000476529 CC2D2AQ9P2K1 1620 aa29.23■■■□□ 2.27
LARP4B-207ENST00000476529 CECR2Q9BXF3 1484 aa29.16■■■□□ 2.26
LARP4B-207ENST00000476529 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
LARP4B-207ENST00000476529 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
LARP4B-207ENST00000476529 SMARCA4P51532 1647 aa28.43■■■□□ 2.14
LARP4B-207ENST00000476529 BAZ1AQ9NRL2 1556 aaPredicted RBP28.37■■■□□ 2.13
LARP4B-207ENST00000476529 SMARCA2P51531 1590 aa28.35■■■□□ 2.13
LARP4B-207ENST00000476529 HMGXB3Q12766 1538 aa28.26■■■□□ 2.11
LARP4B-207ENST00000476529 PEG3Q9GZU2 1588 aa28.2■■■□□ 2.1
LARP4B-207ENST00000476529 MROH2BQ7Z745 1585 aa28.19■■■□□ 2.1
LARP4B-207ENST00000476529 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
LARP4B-207ENST00000476529 ERCC6Q03468 1493 aa27.92■■■□□ 2.06
LARP4B-207ENST00000476529 NESP48681 1621 aa27.9■■■□□ 2.06
LARP4B-207ENST00000476529 WIZO95785 1651 aa27.81■■■□□ 2.04
LARP4B-207ENST00000476529 CUX2O14529 1486 aa27.8■■■□□ 2.04
LARP4B-207ENST00000476529 RSF1Q96T23 1441 aaPredicted RBP27.76■■■□□ 2.04
LARP4B-207ENST00000476529 LAMC3Q9Y6N6 1575 aa27.75■■■□□ 2.03
LARP4B-207ENST00000476529 CADPSQ9ULU8 1353 aa27.68■■■□□ 2.02
LARP4B-207ENST00000476529 PDS5BQ9NTI5 1447 aa27.65■■■□□ 2.02
LARP4B-207ENST00000476529 DNAJC5Q9H3Z4 198 aa27.52■■■□□ 2
LARP4B-207ENST00000476529 TOP2AP11388 1531 aaKnown RBP27.51■■■□□ 2
LARP4B-207ENST00000476529 THOC2Q8NI27 1593 aaKnown RBP27.5■■□□□ 1.99
LARP4B-207ENST00000476529 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
LARP4B-207ENST00000476529 CFTRP13569 1480 aa27.4■■□□□ 1.98
LARP4B-207ENST00000476529 MRC2Q9UBG0 1479 aa27.34■■□□□ 1.97
LARP4B-207ENST00000476529 FANCD2Q9BXW9 1451 aa27.31■■□□□ 1.96
LARP4B-207ENST00000476529 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
LARP4B-207ENST00000476529 CCDC88BA6NC98 1476 aa27.26■■□□□ 1.95
LARP4B-207ENST00000476529 WDR62O43379 1518 aa27.25■■□□□ 1.95
LARP4B-207ENST00000476529 URB2Q14146 1524 aaKnown RBP27.06■■□□□ 1.92
LARP4B-207ENST00000476529 PRDM2Q13029 1718 aa26.97■■□□□ 1.91
LARP4B-207ENST00000476529 TOPBP1Q92547 1522 aa26.82■■□□□ 1.88
LARP4B-207ENST00000476529 ABCC8Q09428 1581 aa26.82■■□□□ 1.88
LARP4B-207ENST00000476529 SUPT5HO00267 1087 aaKnown RBP26.78■■□□□ 1.88
LARP4B-207ENST00000476529 IFT140Q96RY7 1462 aa26.76■■□□□ 1.87
LARP4B-207ENST00000476529 DNMBPQ6XZF7 1577 aa26.71■■□□□ 1.87
LARP4B-207ENST00000476529 ZNF608Q9ULD9 1512 aaPredicted RBP26.67■■□□□ 1.86
LARP4B-207ENST00000476529 OSCARQ8IYS5 282 aa26.67■■□□□ 1.86
LARP4B-207ENST00000476529 POLA1P09884 1462 aaPredicted RBP26.56■■□□□ 1.84
LARP4B-207ENST00000476529 TARBP1Q13395 1621 aaKnown RBP26.52■■□□□ 1.84
LARP4B-207ENST00000476529 AQRO60306 1485 aaKnown RBP eCLIP26.5■■□□□ 1.832e-7■■■■□ 25.3
LARP4B-207ENST00000476529 SOGA1O94964 1423 aa26.5■■□□□ 1.83
LARP4B-207ENST00000476529 RAD54L2Q9Y4B4 1467 aa26.48■■□□□ 1.83
LARP4B-207ENST00000476529 EIF4G3O43432 1585 aaKnown RBP26.46■■□□□ 1.83
LARP4B-207ENST00000476529 CUX1P39880 1505 aa26.45■■□□□ 1.83
LARP4B-207ENST00000476529 FGD5Q6ZNL6 1462 aa26.43■■□□□ 1.82
LARP4B-207ENST00000476529 TDRD9Q8NDG6 1382 aaKnown RBP26.4■■□□□ 1.82
LARP4B-207ENST00000476529 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
LARP4B-207ENST00000476529 WDR97A6NE52 1622 aa26.28■■□□□ 1.8
LARP4B-207ENST00000476529 FBLN2P98095 1184 aa26.27■■□□□ 1.8
LARP4B-207ENST00000476529 GRIN2BQ13224 1484 aa26.2■■□□□ 1.78
LARP4B-207ENST00000476529 SNAPC4Q5SXM2 1469 aa26.19■■□□□ 1.78
LARP4B-207ENST00000476529 ABCA10Q8WWZ4 1543 aa26.19■■□□□ 1.78
LARP4B-207ENST00000476529 WRNQ14191 1432 aaPredicted RBP eCLIP26.17■■□□□ 1.78
LARP4B-207ENST00000476529 CHD1O14646 1710 aa26.17■■□□□ 1.78
LARP4B-207ENST00000476529 CHMP7Q8WUX9 453 aaPredicted RBP26.16■■□□□ 1.78
LARP4B-207ENST00000476529 GAPVD1Q14C86 1478 aa26.16■■□□□ 1.78
LARP4B-207ENST00000476529 MAGI1Q96QZ7 1491 aaPredicted RBP26.16■■□□□ 1.78
LARP4B-207ENST00000476529 RIMBP3CA6NJZ7 1639 aa26.14■■□□□ 1.77
LARP4B-207ENST00000476529 RIMBP3BA6NNM3 1639 aa26.14■■□□□ 1.77
LARP4B-207ENST00000476529 RIMBP3Q9UFD9 1639 aa26.14■■□□□ 1.77
LARP4B-207ENST00000476529 ARHGEF11O15085 1522 aa26.13■■□□□ 1.77
LARP4B-207ENST00000476529 TOP2BQ02880 1626 aa26.1■■□□□ 1.77
LARP4B-207ENST00000476529 BIVM-ERCC5R4GMW8 1640 aa26.07■■□□□ 1.76
LARP4B-207ENST00000476529 SYNJ2O15056 1496 aa26.07■■□□□ 1.76
LARP4B-207ENST00000476529 SYNJ1O43426 1573 aa26.06■■□□□ 1.76
LARP4B-207ENST00000476529 ABCA5Q8WWZ7 1642 aa26.04■■□□□ 1.76
LARP4B-207ENST00000476529 CYB5RLQ6IPT4 315 aa26■■□□□ 1.75
LARP4B-207ENST00000476529 PBRM1Q86U86 1689 aa25.99■■□□□ 1.75
LARP4B-207ENST00000476529 CLASP1Q7Z460 1538 aa25.96■■□□□ 1.75
LARP4B-207ENST00000476529 ARAP1Q96P48 1450 aa25.9■■□□□ 1.74
LARP4B-207ENST00000476529 FHAD1B1AJZ9 1412 aa25.85■■□□□ 1.73
LARP4B-207ENST00000476529 GRIN2AQ12879 1464 aa25.85■■□□□ 1.73
LARP4B-207ENST00000476529 ERICH3Q5RHP9 1530 aa25.84■■□□□ 1.73
LARP4B-207ENST00000476529 ADAMTS12P58397 1594 aa25.82■■□□□ 1.72
LARP4B-207ENST00000476529 NUP160Q12769 1436 aa25.79■■□□□ 1.72
LARP4B-207ENST00000476529 CEP170Q5SW79 1584 aa25.7■■□□□ 1.71
LARP4B-207ENST00000476529 IGF1RP08069 1367 aa25.68■■□□□ 1.7
LARP4B-207ENST00000476529 KIF27Q86VH2 1401 aa25.67■■□□□ 1.7
LARP4B-207ENST00000476529 JPH4Q96JJ6 628 aa25.59■■□□□ 1.69
LARP4B-207ENST00000476529 TRHP20396 242 aaPredicted RBP25.58■■□□□ 1.69
LARP4B-207ENST00000476529 ERCC6L2Q5T890 1561 aa25.57■■□□□ 1.68
LARP4B-207ENST00000476529 SHROOM2Q13796 1616 aa25.56■■□□□ 1.68
LARP4B-207ENST00000476529 PRG4Q92954 1404 aaPredicted RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms