RNA–Protein interactions for RNA: ENST00000476360.1

XRCC5-208, Transcript of X-ray repair cross complementing 5, humanhuman

TSL 2

Gene XRCC5, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC5-208ENST00000476360 NISCHQ9Y2I1 1504 aa22.33■■□□□ 1.17
XRCC5-208ENST00000476360 ABCC9O60706 1549 aa20.4■□□□□ 0.86
XRCC5-208ENST00000476360 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
XRCC5-208ENST00000476360 DNAJC5BQ9UF47 199 aa19.64■□□□□ 0.73
XRCC5-208ENST00000476360 RB1CC1Q8TDY2 1594 aa19.16■□□□□ 0.66
XRCC5-208ENST00000476360 AEBP2Q6ZN18 517 aaPredicted RBP19.12■□□□□ 0.65
XRCC5-208ENST00000476360 PABPN1Q86U42 306 aaKnown RBP eCLIP19.06■□□□□ 0.64
XRCC5-208ENST00000476360 NACADO15069 1562 aa19.02■□□□□ 0.63
XRCC5-208ENST00000476360 DCAF8L2P0C7V8 631 aa18.93■□□□□ 0.62
XRCC5-208ENST00000476360 BICRAQ9NZM4 1560 aa18.81■□□□□ 0.6
XRCC5-208ENST00000476360 MYO15BQ96JP2 1530 aa18.72■□□□□ 0.59
XRCC5-208ENST00000476360 UNC13AQ9UPW8 1703 aa18.71■□□□□ 0.59
XRCC5-208ENST00000476360 ZCCHC6Q5VYS8 1495 aaKnown RBP18.44■□□□□ 0.54
XRCC5-208ENST00000476360 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.54
XRCC5-208ENST00000476360 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.53
XRCC5-208ENST00000476360 CC2D2AQ9P2K1 1620 aa18.37■□□□□ 0.53
XRCC5-208ENST00000476360 SHROOM4Q9ULL8 1493 aa18.34■□□□□ 0.53
XRCC5-208ENST00000476360 CHIC1Q5VXU3 224 aa18.28■□□□□ 0.52
XRCC5-208ENST00000476360 EIF4G1Q04637 1599 aaKnown RBP18.27■□□□□ 0.52
XRCC5-208ENST00000476360 SCRIBQ14160 1630 aa18.25■□□□□ 0.51
XRCC5-208ENST00000476360 DNAJC5Q9H3Z4 198 aa18.08■□□□□ 0.48
XRCC5-208ENST00000476360 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
XRCC5-208ENST00000476360 CUX2O14529 1486 aa17.62■□□□□ 0.41
XRCC5-208ENST00000476360 ATAD2BQ9ULI0 1458 aa17.59■□□□□ 0.41
XRCC5-208ENST00000476360 NESP48681 1621 aa17.51■□□□□ 0.39
XRCC5-208ENST00000476360 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
XRCC5-208ENST00000476360 HMGXB3Q12766 1538 aa17.41■□□□□ 0.38
XRCC5-208ENST00000476360 SMARCA4P51532 1647 aa17.39■□□□□ 0.38
XRCC5-208ENST00000476360 SMARCA2P51531 1590 aa17.37■□□□□ 0.37
XRCC5-208ENST00000476360 BAZ1BQ9UIG0 1483 aaKnown RBP17.29■□□□□ 0.36
XRCC5-208ENST00000476360 PEG3Q9GZU2 1588 aa17.28■□□□□ 0.36
XRCC5-208ENST00000476360 THOC2Q8NI27 1593 aaKnown RBP17.27■□□□□ 0.35
XRCC5-208ENST00000476360 MROH2BQ7Z745 1585 aa17.25■□□□□ 0.35
XRCC5-208ENST00000476360 BAZ1AQ9NRL2 1556 aaPredicted RBP17.24■□□□□ 0.35
XRCC5-208ENST00000476360 LAMC3Q9Y6N6 1575 aa17.17■□□□□ 0.34
XRCC5-208ENST00000476360 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
XRCC5-208ENST00000476360 PDS5BQ9NTI5 1447 aa17.13■□□□□ 0.33
XRCC5-208ENST00000476360 KIF21AQ7Z4S6 1674 aa17.08■□□□□ 0.32
XRCC5-208ENST00000476360 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
XRCC5-208ENST00000476360 MRC2Q9UBG0 1479 aa17.01■□□□□ 0.31
XRCC5-208ENST00000476360 WDR62O43379 1518 aa16.99■□□□□ 0.31
XRCC5-208ENST00000476360 WIZO95785 1651 aa16.94■□□□□ 0.3
XRCC5-208ENST00000476360 FANCD2Q9BXW9 1451 aa16.88■□□□□ 0.29
XRCC5-208ENST00000476360 CFTRP13569 1480 aa16.87■□□□□ 0.29
XRCC5-208ENST00000476360 CEP164Q9UPV0 1460 aa16.86■□□□□ 0.29
XRCC5-208ENST00000476360 OSCARQ8IYS5 282 aa16.84■□□□□ 0.29
XRCC5-208ENST00000476360 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.28
XRCC5-208ENST00000476360 URB2Q14146 1524 aaKnown RBP16.82■□□□□ 0.28
XRCC5-208ENST00000476360 ZNF608Q9ULD9 1512 aaPredicted RBP16.69■□□□□ 0.26
XRCC5-208ENST00000476360 TOP2AP11388 1531 aaKnown RBP16.68■□□□□ 0.26
XRCC5-208ENST00000476360 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
XRCC5-208ENST00000476360 RIMBP3CA6NJZ7 1639 aa16.58■□□□□ 0.24
XRCC5-208ENST00000476360 RIMBP3BA6NNM3 1639 aa16.58■□□□□ 0.24
XRCC5-208ENST00000476360 RIMBP3Q9UFD9 1639 aa16.58■□□□□ 0.24
XRCC5-208ENST00000476360 IFT140Q96RY7 1462 aa16.56■□□□□ 0.24
XRCC5-208ENST00000476360 ARHGEF11O15085 1522 aa16.55■□□□□ 0.24
XRCC5-208ENST00000476360 TOPBP1Q92547 1522 aa16.54■□□□□ 0.24
XRCC5-208ENST00000476360 CYB5RLQ6IPT4 315 aa16.49■□□□□ 0.23
XRCC5-208ENST00000476360 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.231e-12■■■■■ 27.8
XRCC5-208ENST00000476360 ARAP1Q96P48 1450 aa16.42■□□□□ 0.22
XRCC5-208ENST00000476360 EIF4G3O43432 1585 aaKnown RBP16.41■□□□□ 0.22
XRCC5-208ENST00000476360 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
XRCC5-208ENST00000476360 ABCC8Q09428 1581 aa16.38■□□□□ 0.21
XRCC5-208ENST00000476360 DNMBPQ6XZF7 1577 aa16.38■□□□□ 0.21
XRCC5-208ENST00000476360 POLA1P09884 1462 aaPredicted RBP16.37■□□□□ 0.21
XRCC5-208ENST00000476360 PRDM2Q13029 1718 aa16.36■□□□□ 0.21
XRCC5-208ENST00000476360 RAD54L2Q9Y4B4 1467 aa16.36■□□□□ 0.21
XRCC5-208ENST00000476360 TDRD9Q8NDG6 1382 aaKnown RBP16.35■□□□□ 0.21
XRCC5-208ENST00000476360 FBLN2P98095 1184 aa16.32■□□□□ 0.2
XRCC5-208ENST00000476360 SOGA1O94964 1423 aa16.28■□□□□ 0.2
XRCC5-208ENST00000476360 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
XRCC5-208ENST00000476360 CHD1O14646 1710 aa16.28■□□□□ 0.2
XRCC5-208ENST00000476360 CLASP1Q7Z460 1538 aa16.23■□□□□ 0.19
XRCC5-208ENST00000476360 SNAPC4Q5SXM2 1469 aa16.22■□□□□ 0.19
XRCC5-208ENST00000476360 CUX1P39880 1505 aa16.2■□□□□ 0.18
XRCC5-208ENST00000476360 FGD5Q6ZNL6 1462 aa16.2■□□□□ 0.18
XRCC5-208ENST00000476360 CHMP7Q8WUX9 453 aaPredicted RBP16.17■□□□□ 0.18
XRCC5-208ENST00000476360 SENP3Q9H4L4 574 aaPredicted RBP16.14■□□□□ 0.17
XRCC5-208ENST00000476360 GRIN2BQ13224 1484 aa16.12■□□□□ 0.17
XRCC5-208ENST00000476360 MAGI1Q96QZ7 1491 aaPredicted RBP16.12■□□□□ 0.17
XRCC5-208ENST00000476360 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
XRCC5-208ENST00000476360 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
XRCC5-208ENST00000476360 WDR97A6NE52 1622 aa16.07■□□□□ 0.16
XRCC5-208ENST00000476360 SYNJ1O43426 1573 aa16.05■□□□□ 0.16
XRCC5-208ENST00000476360 GAPVD1Q14C86 1478 aa16.05■□□□□ 0.16
XRCC5-208ENST00000476360 ERCC6L2Q5T890 1561 aa16.04■□□□□ 0.16
XRCC5-208ENST00000476360 ABCA10Q8WWZ4 1543 aa16.01■□□□□ 0.15
XRCC5-208ENST00000476360 ABCA5Q8WWZ7 1642 aa15.97■□□□□ 0.15
XRCC5-208ENST00000476360 NUP160Q12769 1436 aa15.95■□□□□ 0.14
XRCC5-208ENST00000476360 GRIN2AQ12879 1464 aa15.93■□□□□ 0.14
XRCC5-208ENST00000476360 PBRM1Q86U86 1689 aa15.9■□□□□ 0.14
XRCC5-208ENST00000476360 CEP170Q5SW79 1584 aa15.9■□□□□ 0.14
XRCC5-208ENST00000476360 WRNQ14191 1432 aaPredicted RBP eCLIP15.86■□□□□ 0.13
XRCC5-208ENST00000476360 ADAMTS12P58397 1594 aa15.84■□□□□ 0.13
XRCC5-208ENST00000476360 FHAD1B1AJZ9 1412 aa15.84■□□□□ 0.13
XRCC5-208ENST00000476360 SHROOM2Q13796 1616 aa15.83■□□□□ 0.12
XRCC5-208ENST00000476360 SUPT5HO00267 1087 aaKnown RBP15.81■□□□□ 0.12
XRCC5-208ENST00000476360 JPH4Q96JJ6 628 aa15.81■□□□□ 0.12
XRCC5-208ENST00000476360 PRG4Q92954 1404 aaPredicted RBP15.78■□□□□ 0.12
XRCC5-208ENST00000476360 TOP2BQ02880 1626 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms