RNA–Protein interactions for RNA: ENST00000476286.1

NCK1-205, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-205ENST00000476286 NISCHQ9Y2I1 1504 aa39.76■■■■□ 3.96
NCK1-205ENST00000476286 CCDC180Q9P1Z9 1646 aa35.49■■■■□ 3.27
NCK1-205ENST00000476286 ABCC9O60706 1549 aa35.1■■■■□ 3.21
NCK1-205ENST00000476286 RB1CC1Q8TDY2 1594 aa33.6■■■□□ 2.97
NCK1-205ENST00000476286 NACADO15069 1562 aa33.47■■■□□ 2.95
NCK1-205ENST00000476286 DCAF8L2P0C7V8 631 aa33.34■■■□□ 2.93
NCK1-205ENST00000476286 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
NCK1-205ENST00000476286 ZCCHC6Q5VYS8 1495 aaKnown RBP33.05■■■□□ 2.88
NCK1-205ENST00000476286 DCAF1Q9Y4B6 1507 aa32.89■■■□□ 2.86
NCK1-205ENST00000476286 UNC13AQ9UPW8 1703 aa32.8■■■□□ 2.84
NCK1-205ENST00000476286 PABPN1Q86U42 306 aaKnown RBP eCLIP32.75■■■□□ 2.83
NCK1-205ENST00000476286 BICRAQ9NZM4 1560 aa32.62■■■□□ 2.81
NCK1-205ENST00000476286 DNAJC5BQ9UF47 199 aa32.6■■■□□ 2.81
NCK1-205ENST00000476286 SCRIBQ14160 1630 aa32.34■■■□□ 2.77
NCK1-205ENST00000476286 SHROOM4Q9ULL8 1493 aa32.24■■■□□ 2.75
NCK1-205ENST00000476286 EIF4G1Q04637 1599 aaKnown RBP31.77■■■□□ 2.68
NCK1-205ENST00000476286 CC2D2AQ9P2K1 1620 aa31.73■■■□□ 2.67
NCK1-205ENST00000476286 CECR2Q9BXF3 1484 aa31.59■■■□□ 2.65
NCK1-205ENST00000476286 NCAPD3P42695 1498 aa30.92■■■□□ 2.54
NCK1-205ENST00000476286 SMARCA4P51532 1647 aa30.91■■■□□ 2.54
NCK1-205ENST00000476286 ATAD2BQ9ULI0 1458 aa30.87■■■□□ 2.53
NCK1-205ENST00000476286 BAZ1AQ9NRL2 1556 aaPredicted RBP30.83■■■□□ 2.53
NCK1-205ENST00000476286 SMARCA2P51531 1590 aa30.79■■■□□ 2.52
NCK1-205ENST00000476286 HMGXB3Q12766 1538 aa30.71■■■□□ 2.51
NCK1-205ENST00000476286 PEG3Q9GZU2 1588 aa30.65■■■□□ 2.5
NCK1-205ENST00000476286 MROH2BQ7Z745 1585 aa30.63■■■□□ 2.49
NCK1-205ENST00000476286 BAZ1BQ9UIG0 1483 aaKnown RBP30.57■■■□□ 2.48
NCK1-205ENST00000476286 NESP48681 1621 aa30.27■■■□□ 2.44
NCK1-205ENST00000476286 ERCC6Q03468 1493 aa30.26■■■□□ 2.44
NCK1-205ENST00000476286 WIZO95785 1651 aa30.26■■■□□ 2.43
NCK1-205ENST00000476286 RSF1Q96T23 1441 aaPredicted RBP30.16■■■□□ 2.42
NCK1-205ENST00000476286 LAMC3Q9Y6N6 1575 aa30.13■■■□□ 2.41
NCK1-205ENST00000476286 CUX2O14529 1486 aa30.12■■■□□ 2.41
NCK1-205ENST00000476286 CADPSQ9ULU8 1353 aa29.99■■■□□ 2.39
NCK1-205ENST00000476286 PDS5BQ9NTI5 1447 aa29.95■■■□□ 2.38
NCK1-205ENST00000476286 TOP2AP11388 1531 aaKnown RBP29.93■■■□□ 2.38
NCK1-205ENST00000476286 THOC2Q8NI27 1593 aaKnown RBP29.89■■■□□ 2.38
NCK1-205ENST00000476286 KIF21AQ7Z4S6 1674 aa29.87■■■□□ 2.37
NCK1-205ENST00000476286 CFTRP13569 1480 aa29.74■■■□□ 2.35
NCK1-205ENST00000476286 MRC2Q9UBG0 1479 aa29.67■■■□□ 2.34
NCK1-205ENST00000476286 DNAJC5Q9H3Z4 198 aa29.65■■■□□ 2.34
NCK1-205ENST00000476286 FANCD2Q9BXW9 1451 aa29.63■■■□□ 2.33
NCK1-205ENST00000476286 CEP164Q9UPV0 1460 aa29.62■■■□□ 2.33
NCK1-205ENST00000476286 CCDC88BA6NC98 1476 aa29.6■■■□□ 2.33
NCK1-205ENST00000476286 WDR62O43379 1518 aa29.59■■■□□ 2.33
NCK1-205ENST00000476286 PRDM2Q13029 1718 aa29.4■■■□□ 2.3
NCK1-205ENST00000476286 URB2Q14146 1524 aaKnown RBP29.36■■■□□ 2.29
NCK1-205ENST00000476286 TOPBP1Q92547 1522 aa29.11■■■□□ 2.25
NCK1-205ENST00000476286 ABCC8Q09428 1581 aa29.09■■■□□ 2.25
NCK1-205ENST00000476286 SUPT5HO00267 1087 aaKnown RBP29.06■■■□□ 2.24
NCK1-205ENST00000476286 DNMBPQ6XZF7 1577 aa29.04■■■□□ 2.24
NCK1-205ENST00000476286 IFT140Q96RY7 1462 aa29.03■■■□□ 2.24
NCK1-205ENST00000476286 ZNF608Q9ULD9 1512 aaPredicted RBP28.94■■■□□ 2.22
NCK1-205ENST00000476286 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
NCK1-205ENST00000476286 TARBP1Q13395 1621 aaKnown RBP28.83■■■□□ 2.21
NCK1-205ENST00000476286 OSCARQ8IYS5 282 aa28.8■■■□□ 2.2
NCK1-205ENST00000476286 EIF4G3O43432 1585 aaKnown RBP28.78■■■□□ 2.2
NCK1-205ENST00000476286 CUX1P39880 1505 aa28.76■■■□□ 2.19
NCK1-205ENST00000476286 AQRO60306 1485 aaKnown RBP eCLIP28.72■■■□□ 2.19
NCK1-205ENST00000476286 RAD54L2Q9Y4B4 1467 aa28.72■■■□□ 2.19
NCK1-205ENST00000476286 SOGA1O94964 1423 aa28.72■■■□□ 2.19
NCK1-205ENST00000476286 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
NCK1-205ENST00000476286 TDRD9Q8NDG6 1382 aaKnown RBP28.61■■■□□ 2.17
NCK1-205ENST00000476286 WDR97A6NE52 1622 aa28.57■■■□□ 2.16
NCK1-205ENST00000476286 TRIM41Q8WV44 630 aa28.47■■■□□ 2.15
NCK1-205ENST00000476286 CHD1O14646 1710 aa28.46■■■□□ 2.15
NCK1-205ENST00000476286 SNAPC4Q5SXM2 1469 aa28.44■■■□□ 2.14
NCK1-205ENST00000476286 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.14
NCK1-205ENST00000476286 ABCA10Q8WWZ4 1543 aa28.43■■■□□ 2.14
NCK1-205ENST00000476286 GRIN2BQ13224 1484 aa28.42■■■□□ 2.14
NCK1-205ENST00000476286 FBLN2P98095 1184 aa28.42■■■□□ 2.14
NCK1-205ENST00000476286 TOP2BQ02880 1626 aa28.4■■■□□ 2.14
NCK1-205ENST00000476286 MAGI1Q96QZ7 1491 aaPredicted RBP28.4■■■□□ 2.14
NCK1-205ENST00000476286 BIVM-ERCC5R4GMW8 1640 aa28.4■■■□□ 2.14
NCK1-205ENST00000476286 GAPVD1Q14C86 1478 aa28.38■■■□□ 2.13
NCK1-205ENST00000476286 SYNJ1O43426 1573 aa28.37■■■□□ 2.13
NCK1-205ENST00000476286 RIMBP3CA6NJZ7 1639 aa28.36■■■□□ 2.13
NCK1-205ENST00000476286 RIMBP3BA6NNM3 1639 aa28.36■■■□□ 2.13
NCK1-205ENST00000476286 RIMBP3Q9UFD9 1639 aa28.36■■■□□ 2.13
NCK1-205ENST00000476286 ABCA5Q8WWZ7 1642 aa28.34■■■□□ 2.13
NCK1-205ENST00000476286 ARHGEF11O15085 1522 aa28.33■■■□□ 2.13
NCK1-205ENST00000476286 PBRM1Q86U86 1689 aa28.3■■■□□ 2.12
NCK1-205ENST00000476286 CHMP7Q8WUX9 453 aaPredicted RBP28.3■■■□□ 2.12
NCK1-205ENST00000476286 SYNJ2O15056 1496 aa28.29■■■□□ 2.12
NCK1-205ENST00000476286 CLASP1Q7Z460 1538 aa28.2■■■□□ 2.1
NCK1-205ENST00000476286 ADAMTS12P58397 1594 aa28.09■■■□□ 2.09
NCK1-205ENST00000476286 CYB5RLQ6IPT4 315 aa28.08■■■□□ 2.09
NCK1-205ENST00000476286 ARAP1Q96P48 1450 aa28.08■■■□□ 2.09
NCK1-205ENST00000476286 ERICH3Q5RHP9 1530 aa28.08■■■□□ 2.08
NCK1-205ENST00000476286 GRIN2AQ12879 1464 aa28.06■■■□□ 2.08
NCK1-205ENST00000476286 FHAD1B1AJZ9 1412 aa28.04■■■□□ 2.08
NCK1-205ENST00000476286 NUP160Q12769 1436 aa27.97■■■□□ 2.07
NCK1-205ENST00000476286 CEP170Q5SW79 1584 aa27.94■■■□□ 2.06
NCK1-205ENST00000476286 KIF27Q86VH2 1401 aa27.86■■■□□ 2.05
NCK1-205ENST00000476286 IGF1RP08069 1367 aa27.82■■■□□ 2.04
NCK1-205ENST00000476286 SHROOM2Q13796 1616 aa27.78■■■□□ 2.04
NCK1-205ENST00000476286 ERCC6L2Q5T890 1561 aa27.77■■■□□ 2.04
NCK1-205ENST00000476286 CUL7Q14999 1698 aa27.72■■■□□ 2.03
NCK1-205ENST00000476286 RUSC2Q8N2Y8 1516 aa27.68■■■□□ 2.02
NCK1-205ENST00000476286 JPH4Q96JJ6 628 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms