RNA–Protein interactions for RNA: ENST00000476211.5

ABCA2-216, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 997 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-216ENST00000476211 NISCHQ9Y2I1 1504 aa40.72■■■■■ 4.11
ABCA2-216ENST00000476211 CCDC180Q9P1Z9 1646 aa36.52■■■■□ 3.44
ABCA2-216ENST00000476211 ABCC9O60706 1549 aa36.18■■■■□ 3.38
ABCA2-216ENST00000476211 RB1CC1Q8TDY2 1594 aa34.62■■■■□ 3.13
ABCA2-216ENST00000476211 NACADO15069 1562 aa34.44■■■■□ 3.1
ABCA2-216ENST00000476211 DCAF8L2P0C7V8 631 aa34.09■■■■□ 3.05
ABCA2-216ENST00000476211 MYO15BQ96JP2 1530 aa34.09■■■■□ 3.05
ABCA2-216ENST00000476211 ZCCHC6Q5VYS8 1495 aaKnown RBP33.84■■■■□ 3.01
ABCA2-216ENST00000476211 UNC13AQ9UPW8 1703 aa33.81■■■■□ 3
ABCA2-216ENST00000476211 DCAF1Q9Y4B6 1507 aa33.73■■■□□ 2.99
ABCA2-216ENST00000476211 DNAJC5BQ9UF47 199 aa33.67■■■□□ 2.98
ABCA2-216ENST00000476211 PABPN1Q86U42 306 aaKnown RBP eCLIP33.65■■■□□ 2.98
ABCA2-216ENST00000476211 BICRAQ9NZM4 1560 aa33.59■■■□□ 2.97
ABCA2-216ENST00000476211 SHROOM4Q9ULL8 1493 aa33.26■■■□□ 2.92
ABCA2-216ENST00000476211 SCRIBQ14160 1630 aa33.22■■■□□ 2.91
ABCA2-216ENST00000476211 EIF4G1Q04637 1599 aaKnown RBP32.75■■■□□ 2.83
ABCA2-216ENST00000476211 CC2D2AQ9P2K1 1620 aa32.73■■■□□ 2.83
ABCA2-216ENST00000476211 CECR2Q9BXF3 1484 aa32.61■■■□□ 2.81
ABCA2-216ENST00000476211 NCAPD3P42695 1498 aa31.77■■■□□ 2.68
ABCA2-216ENST00000476211 SMARCA4P51532 1647 aa31.75■■■□□ 2.67
ABCA2-216ENST00000476211 ATAD2BQ9ULI0 1458 aa31.69■■■□□ 2.66
ABCA2-216ENST00000476211 SMARCA2P51531 1590 aa31.65■■■□□ 2.66
ABCA2-216ENST00000476211 BAZ1AQ9NRL2 1556 aaPredicted RBP31.63■■■□□ 2.65
ABCA2-216ENST00000476211 HMGXB3Q12766 1538 aa31.6■■■□□ 2.65
ABCA2-216ENST00000476211 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
ABCA2-216ENST00000476211 BAZ1BQ9UIG0 1483 aaKnown RBP31.4■■■□□ 2.62
ABCA2-216ENST00000476211 MROH2BQ7Z745 1585 aa31.36■■■□□ 2.61
ABCA2-216ENST00000476211 ERCC6Q03468 1493 aa31.25■■■□□ 2.59
ABCA2-216ENST00000476211 CUX2O14529 1486 aa31.17■■■□□ 2.58
ABCA2-216ENST00000476211 NESP48681 1621 aa31.15■■■□□ 2.58
ABCA2-216ENST00000476211 LAMC3Q9Y6N6 1575 aa31.05■■■□□ 2.56
ABCA2-216ENST00000476211 WIZO95785 1651 aa31■■■□□ 2.55
ABCA2-216ENST00000476211 THOC2Q8NI27 1593 aaKnown RBP30.88■■■□□ 2.53
ABCA2-216ENST00000476211 PDS5BQ9NTI5 1447 aa30.82■■■□□ 2.52
ABCA2-216ENST00000476211 DNAJC5Q9H3Z4 198 aa30.8■■■□□ 2.52
ABCA2-216ENST00000476211 KIF21AQ7Z4S6 1674 aa30.8■■■□□ 2.52
ABCA2-216ENST00000476211 RSF1Q96T23 1441 aaPredicted RBP30.79■■■□□ 2.52
ABCA2-216ENST00000476211 CADPSQ9ULU8 1353 aa30.79■■■□□ 2.52
ABCA2-216ENST00000476211 TOP2AP11388 1531 aaKnown RBP30.68■■■□□ 2.5
ABCA2-216ENST00000476211 MRC2Q9UBG0 1479 aa30.56■■■□□ 2.48
ABCA2-216ENST00000476211 CFTRP13569 1480 aa30.51■■■□□ 2.48
ABCA2-216ENST00000476211 WDR62O43379 1518 aa30.51■■■□□ 2.47
ABCA2-216ENST00000476211 CEP164Q9UPV0 1460 aa30.48■■■□□ 2.47
ABCA2-216ENST00000476211 FANCD2Q9BXW9 1451 aa30.44■■■□□ 2.46
ABCA2-216ENST00000476211 PRDM2Q13029 1718 aa30.27■■■□□ 2.44
ABCA2-216ENST00000476211 CCDC88BA6NC98 1476 aa30.26■■■□□ 2.44
ABCA2-216ENST00000476211 URB2Q14146 1524 aaKnown RBP30.19■■■□□ 2.42
ABCA2-216ENST00000476211 TOPBP1Q92547 1522 aa29.9■■■□□ 2.38
ABCA2-216ENST00000476211 ABCC8Q09428 1581 aa29.87■■■□□ 2.37
ABCA2-216ENST00000476211 IFT140Q96RY7 1462 aa29.87■■■□□ 2.37
ABCA2-216ENST00000476211 DNMBPQ6XZF7 1577 aa29.85■■■□□ 2.37
ABCA2-216ENST00000476211 SUPT5HO00267 1087 aaKnown RBP29.83■■■□□ 2.37
ABCA2-216ENST00000476211 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.35
ABCA2-216ENST00000476211 OSCARQ8IYS5 282 aa29.67■■■□□ 2.34
ABCA2-216ENST00000476211 EIF4G3O43432 1585 aaKnown RBP29.67■■■□□ 2.34
ABCA2-216ENST00000476211 TARBP1Q13395 1621 aaKnown RBP29.64■■■□□ 2.34
ABCA2-216ENST00000476211 POLA1P09884 1462 aaPredicted RBP29.61■■■□□ 2.33
ABCA2-216ENST00000476211 AQRO60306 1485 aaKnown RBP eCLIP29.48■■■□□ 2.314e-7■■■□□ 18.1
ABCA2-216ENST00000476211 TRIM41Q8WV44 630 aa29.48■■■□□ 2.31
ABCA2-216ENST00000476211 CUX1P39880 1505 aa29.46■■■□□ 2.31
ABCA2-216ENST00000476211 FGD5Q6ZNL6 1462 aa29.45■■■□□ 2.31
ABCA2-216ENST00000476211 RAD54L2Q9Y4B4 1467 aa29.45■■■□□ 2.31
ABCA2-216ENST00000476211 SOGA1O94964 1423 aa29.44■■■□□ 2.3
ABCA2-216ENST00000476211 WDR97A6NE52 1622 aa29.43■■■□□ 2.3
ABCA2-216ENST00000476211 CHD1O14646 1710 aa29.37■■■□□ 2.29
ABCA2-216ENST00000476211 RIMBP3CA6NJZ7 1639 aa29.34■■■□□ 2.29
ABCA2-216ENST00000476211 RIMBP3BA6NNM3 1639 aa29.34■■■□□ 2.29
ABCA2-216ENST00000476211 RIMBP3Q9UFD9 1639 aa29.34■■■□□ 2.29
ABCA2-216ENST00000476211 TDRD9Q8NDG6 1382 aaKnown RBP29.33■■■□□ 2.29
ABCA2-216ENST00000476211 ARHGEF11O15085 1522 aa29.28■■■□□ 2.28
ABCA2-216ENST00000476211 SNAPC4Q5SXM2 1469 aa29.24■■■□□ 2.27
ABCA2-216ENST00000476211 GRIN2BQ13224 1484 aa29.21■■■□□ 2.27
ABCA2-216ENST00000476211 MAGI1Q96QZ7 1491 aaPredicted RBP29.21■■■□□ 2.27
ABCA2-216ENST00000476211 FBLN2P98095 1184 aa29.19■■■□□ 2.26
ABCA2-216ENST00000476211 ABCA10Q8WWZ4 1543 aa29.15■■■□□ 2.26
ABCA2-216ENST00000476211 PBRM1Q86U86 1689 aa29.13■■■□□ 2.25
ABCA2-216ENST00000476211 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
ABCA2-216ENST00000476211 GAPVD1Q14C86 1478 aa29.11■■■□□ 2.25
ABCA2-216ENST00000476211 BIVM-ERCC5R4GMW8 1640 aa29.1■■■□□ 2.25
ABCA2-216ENST00000476211 SYNJ2O15056 1496 aa29.1■■■□□ 2.25
ABCA2-216ENST00000476211 TOP2BQ02880 1626 aa29.09■■■□□ 2.25
ABCA2-216ENST00000476211 CLASP1Q7Z460 1538 aa29.08■■■□□ 2.25
ABCA2-216ENST00000476211 SYNJ1O43426 1573 aa29.07■■■□□ 2.24
ABCA2-216ENST00000476211 WRNQ14191 1432 aaPredicted RBP eCLIP29.05■■■□□ 2.24
ABCA2-216ENST00000476211 CHMP7Q8WUX9 453 aaPredicted RBP29.05■■■□□ 2.24
ABCA2-216ENST00000476211 ARAP1Q96P48 1450 aa29■■■□□ 2.23
ABCA2-216ENST00000476211 CYB5RLQ6IPT4 315 aa28.93■■■□□ 2.22
ABCA2-216ENST00000476211 ADAMTS12P58397 1594 aa28.88■■■□□ 2.21
ABCA2-216ENST00000476211 GRIN2AQ12879 1464 aa28.84■■■□□ 2.21
ABCA2-216ENST00000476211 ERICH3Q5RHP9 1530 aa28.81■■■□□ 2.2
ABCA2-216ENST00000476211 FHAD1B1AJZ9 1412 aa28.77■■■□□ 2.2
ABCA2-216ENST00000476211 NUP160Q12769 1436 aa28.74■■■□□ 2.19
ABCA2-216ENST00000476211 CEP170Q5SW79 1584 aa28.73■■■□□ 2.19
ABCA2-216ENST00000476211 SHROOM2Q13796 1616 aa28.61■■■□□ 2.17
ABCA2-216ENST00000476211 ERCC6L2Q5T890 1561 aa28.58■■■□□ 2.17
ABCA2-216ENST00000476211 TRHP20396 242 aaPredicted RBP28.54■■■□□ 2.16
ABCA2-216ENST00000476211 KIF27Q86VH2 1401 aa28.49■■■□□ 2.15
ABCA2-216ENST00000476211 RUSC2Q8N2Y8 1516 aa28.48■■■□□ 2.15
ABCA2-216ENST00000476211 CUL7Q14999 1698 aa28.45■■■□□ 2.15
ABCA2-216ENST00000476211 IGF1RP08069 1367 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms