RNA–Protein interactions for RNA: ENST00000476211.5

ABCA2-216, Transcript of ATP binding cassette subfamily A member 2, human

TSL 2

Gene ABCA2, Length 997 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-216	ENST00000476211	SF3B1	O75533	1304 aa	Known RBP eCLIP	17.98	■□□□□ 0.47	3e-9	■■■■■ 206.8
ABCA2-216	ENST00000476211	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	17.64	■□□□□ 0.41	7e-8	■■■■■ 186.3
ABCA2-216	ENST00000476211	EFTUD2	Q15029	972 aa	Known RBP eCLIP	15.93	■□□□□ 0.14	1e-7	■■■■■ 52.3
ABCA2-216	ENST00000476211	PCBP1	Q15365	356 aa	Known RBP eCLIP	18.34	■□□□□ 0.53	8e-6	■■■■■ 32.8
ABCA2-216	ENST00000476211	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	19.04	■□□□□ 0.64	7e-9	■■■■■ 30.2
ABCA2-216	ENST00000476211	PTBP1	P26599	531 aa	Known RBP eCLIP	12.9	□□□□□ -0.34	2e-11	■■■■■ 27.6
ABCA2-216	ENST00000476211	U2AF2	P26368	475 aa	Known RBP eCLIP	18.7	■□□□□ 0.58	8e-6	■■■■□ 25
ABCA2-216	ENST00000476211	DDX3X	O00571	662 aa	Known RBP eCLIP	17.16	■□□□□ 0.34	1e-11	■■■■□ 19.4
ABCA2-216	ENST00000476211	AQR	O60306	1485 aa	Known RBP eCLIP	29.48	■■■□□ 2.31	4e-7	■■■□□ 18.1
ABCA2-216	ENST00000476211	PPIG	Q13427	754 aa	Known RBP eCLIP	19.06	■□□□□ 0.64	2e-6	■■■□□ 16.5
ABCA2-216	ENST00000476211	RBFOX2	O43251	390 aa	Known RBP eCLIP	12.95	□□□□□ -0.34	2e-6	■■□□□ 14.2

Retrieved 11 of 11 RNA–protein pairs in 3.2 ms