RNA–Protein interactions for RNA: ENST00000476211.5

ABCA2-216, Transcript of ATP binding cassette subfamily A member 2, humanhuman


Gene ABCA2, Length 997 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-216ENST00000476211 SF3B1O75533 1304 aaKnown RBP eCLIP17.98■□□□□ 0.473e-9■■■■■ 206.8
ABCA2-216ENST00000476211 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.64■□□□□ 0.417e-8■■■■■ 186.3
ABCA2-216ENST00000476211 EFTUD2Q15029 972 aaKnown RBP eCLIP15.93■□□□□ 0.141e-7■■■■■ 52.3
ABCA2-216ENST00000476211 PCBP1Q15365 356 aaKnown RBP eCLIP18.34■□□□□ 0.538e-6■■■■■ 32.8
ABCA2-216ENST00000476211 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.04■□□□□ 0.647e-9■■■■■ 30.2
ABCA2-216ENST00000476211 PTBP1P26599 531 aaKnown RBP eCLIP12.9□□□□□ -0.342e-11■■■■■ 27.6
ABCA2-216ENST00000476211 U2AF2P26368 475 aaKnown RBP eCLIP18.7■□□□□ 0.588e-6■■■■□ 25
ABCA2-216ENST00000476211 DDX3XO00571 662 aaKnown RBP eCLIP17.16■□□□□ 0.341e-11■■■■□ 19.4
ABCA2-216ENST00000476211 AQRO60306 1485 aaKnown RBP eCLIP29.48■■■□□ 2.314e-7■■■□□ 18.1
ABCA2-216ENST00000476211 PPIGQ13427 754 aaKnown RBP eCLIP19.06■□□□□ 0.642e-6■■■□□ 16.5
ABCA2-216ENST00000476211 RBFOX2O43251 390 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■□□□ 14.2
Retrieved 11 of 11 RNA–protein pairs in 6 ms