RNA–Protein interactions for RNA: ENST00000476153.6

CDK18-208, Transcript of cyclin dependent kinase 18, humanhuman

TSL 3

Gene CDK18, Length 954 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-208ENST00000476153 NISCHQ9Y2I1 1504 aa27.47■■□□□ 1.99
CDK18-208ENST00000476153 ABCC9O60706 1549 aa24.55■■□□□ 1.52
CDK18-208ENST00000476153 CCDC180Q9P1Z9 1646 aa24.54■■□□□ 1.52
CDK18-208ENST00000476153 RB1CC1Q8TDY2 1594 aa23.35■■□□□ 1.33
CDK18-208ENST00000476153 NACADO15069 1562 aa23.23■■□□□ 1.31
CDK18-208ENST00000476153 DCAF8L2P0C7V8 631 aa23.17■■□□□ 1.3
CDK18-208ENST00000476153 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
CDK18-208ENST00000476153 MYO15BQ96JP2 1530 aa22.93■■□□□ 1.26
CDK18-208ENST00000476153 PABPN1Q86U42 306 aaKnown RBP eCLIP22.9■■□□□ 1.26
CDK18-208ENST00000476153 UNC13AQ9UPW8 1703 aa22.8■■□□□ 1.24
CDK18-208ENST00000476153 ZCCHC6Q5VYS8 1495 aaKnown RBP22.79■■□□□ 1.24
CDK18-208ENST00000476153 BICRAQ9NZM4 1560 aa22.71■■□□□ 1.23
CDK18-208ENST00000476153 DCAF1Q9Y4B6 1507 aa22.67■■□□□ 1.22
CDK18-208ENST00000476153 SCRIBQ14160 1630 aa22.42■■□□□ 1.18
CDK18-208ENST00000476153 SHROOM4Q9ULL8 1493 aa22.36■■□□□ 1.17
CDK18-208ENST00000476153 CC2D2AQ9P2K1 1620 aa22.16■■□□□ 1.14
CDK18-208ENST00000476153 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
CDK18-208ENST00000476153 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
CDK18-208ENST00000476153 NCAPD3P42695 1498 aa21.47■■□□□ 1.03
CDK18-208ENST00000476153 ATAD2BQ9ULI0 1458 aa21.43■■□□□ 1.02
CDK18-208ENST00000476153 SMARCA4P51532 1647 aa21.39■■□□□ 1.01
CDK18-208ENST00000476153 SMARCA2P51531 1590 aa21.32■■□□□ 1
CDK18-208ENST00000476153 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
CDK18-208ENST00000476153 HMGXB3Q12766 1538 aa21.29■■□□□ 1
CDK18-208ENST00000476153 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
CDK18-208ENST00000476153 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
CDK18-208ENST00000476153 PEG3Q9GZU2 1588 aa21.19■□□□□ 0.98
CDK18-208ENST00000476153 ERCC6Q03468 1493 aa21.16■□□□□ 0.98
CDK18-208ENST00000476153 NESP48681 1621 aa21.13■□□□□ 0.97
CDK18-208ENST00000476153 CUX2O14529 1486 aa21.09■□□□□ 0.97
CDK18-208ENST00000476153 DNAJC5Q9H3Z4 198 aa21.02■□□□□ 0.96
CDK18-208ENST00000476153 LAMC3Q9Y6N6 1575 aa20.93■□□□□ 0.94
CDK18-208ENST00000476153 WIZO95785 1651 aa20.91■□□□□ 0.94
CDK18-208ENST00000476153 THOC2Q8NI27 1593 aaKnown RBP20.85■□□□□ 0.93
CDK18-208ENST00000476153 PDS5BQ9NTI5 1447 aa20.83■□□□□ 0.93
CDK18-208ENST00000476153 CADPSQ9ULU8 1353 aa20.83■□□□□ 0.92
CDK18-208ENST00000476153 RSF1Q96T23 1441 aaPredicted RBP20.79■□□□□ 0.92
CDK18-208ENST00000476153 KIF21AQ7Z4S6 1674 aa20.79■□□□□ 0.92
CDK18-208ENST00000476153 TOP2AP11388 1531 aaKnown RBP20.65■□□□□ 0.9
CDK18-208ENST00000476153 MRC2Q9UBG0 1479 aa20.65■□□□□ 0.9
CDK18-208ENST00000476153 CFTRP13569 1480 aa20.61■□□□□ 0.89
CDK18-208ENST00000476153 WDR62O43379 1518 aa20.59■□□□□ 0.89
CDK18-208ENST00000476153 FANCD2Q9BXW9 1451 aa20.58■□□□□ 0.89
CDK18-208ENST00000476153 CEP164Q9UPV0 1460 aa20.58■□□□□ 0.89
CDK18-208ENST00000476153 CCDC88BA6NC98 1476 aa20.44■□□□□ 0.86
CDK18-208ENST00000476153 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
CDK18-208ENST00000476153 PRDM2Q13029 1718 aa20.3■□□□□ 0.84
CDK18-208ENST00000476153 TOPBP1Q92547 1522 aa20.21■□□□□ 0.83
CDK18-208ENST00000476153 OSCARQ8IYS5 282 aa20.17■□□□□ 0.82
CDK18-208ENST00000476153 IFT140Q96RY7 1462 aa20.17■□□□□ 0.82
CDK18-208ENST00000476153 ZNF608Q9ULD9 1512 aaPredicted RBP20.17■□□□□ 0.82
CDK18-208ENST00000476153 TRIM41Q8WV44 630 aa20.14■□□□□ 0.81
CDK18-208ENST00000476153 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
CDK18-208ENST00000476153 DNMBPQ6XZF7 1577 aa20.11■□□□□ 0.81
CDK18-208ENST00000476153 EIF4G3O43432 1585 aaKnown RBP20.01■□□□□ 0.79
CDK18-208ENST00000476153 POLA1P09884 1462 aaPredicted RBP20■□□□□ 0.79
CDK18-208ENST00000476153 TARBP1Q13395 1621 aaKnown RBP20■□□□□ 0.79
CDK18-208ENST00000476153 AQRO60306 1485 aaKnown RBP eCLIP19.99■□□□□ 0.79
CDK18-208ENST00000476153 RAD54L2Q9Y4B4 1467 aa19.95■□□□□ 0.78
CDK18-208ENST00000476153 SUPT5HO00267 1087 aaKnown RBP19.94■□□□□ 0.78
CDK18-208ENST00000476153 SOGA1O94964 1423 aa19.92■□□□□ 0.78
CDK18-208ENST00000476153 CUX1P39880 1505 aa19.9■□□□□ 0.78
CDK18-208ENST00000476153 FGD5Q6ZNL6 1462 aa19.89■□□□□ 0.77
CDK18-208ENST00000476153 TDRD9Q8NDG6 1382 aaKnown RBP19.89■□□□□ 0.77
CDK18-208ENST00000476153 RIMBP3CA6NJZ7 1639 aa19.87■□□□□ 0.77
CDK18-208ENST00000476153 RIMBP3BA6NNM3 1639 aa19.87■□□□□ 0.77
CDK18-208ENST00000476153 RIMBP3Q9UFD9 1639 aa19.87■□□□□ 0.77
CDK18-208ENST00000476153 ARHGEF11O15085 1522 aa19.83■□□□□ 0.77
CDK18-208ENST00000476153 FBLN2P98095 1184 aa19.83■□□□□ 0.77
CDK18-208ENST00000476153 CHD1O14646 1710 aa19.82■□□□□ 0.76
CDK18-208ENST00000476153 SNAPC4Q5SXM2 1469 aa19.78■□□□□ 0.76
CDK18-208ENST00000476153 WDR97A6NE52 1622 aa19.76■□□□□ 0.75
CDK18-208ENST00000476153 GRIN2BQ13224 1484 aa19.72■□□□□ 0.75
CDK18-208ENST00000476153 CYB5RLQ6IPT4 315 aa19.71■□□□□ 0.75
CDK18-208ENST00000476153 MAGI1Q96QZ7 1491 aaPredicted RBP19.71■□□□□ 0.75
CDK18-208ENST00000476153 CHMP7Q8WUX9 453 aaPredicted RBP19.69■□□□□ 0.74
CDK18-208ENST00000476153 GAPVD1Q14C86 1478 aa19.67■□□□□ 0.74
CDK18-208ENST00000476153 ARAP1Q96P48 1450 aa19.67■□□□□ 0.74
CDK18-208ENST00000476153 ABCA10Q8WWZ4 1543 aa19.66■□□□□ 0.74
CDK18-208ENST00000476153 SYNJ2O15056 1496 aa19.65■□□□□ 0.74
CDK18-208ENST00000476153 CLASP1Q7Z460 1538 aa19.64■□□□□ 0.73
CDK18-208ENST00000476153 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
CDK18-208ENST00000476153 WRNQ14191 1432 aaPredicted RBP eCLIP19.6■□□□□ 0.73
CDK18-208ENST00000476153 PBRM1Q86U86 1689 aa19.6■□□□□ 0.73
CDK18-208ENST00000476153 SYNJ1O43426 1573 aa19.6■□□□□ 0.73
CDK18-208ENST00000476153 TOP2BQ02880 1626 aa19.57■□□□□ 0.72
CDK18-208ENST00000476153 BIVM-ERCC5R4GMW8 1640 aa19.55■□□□□ 0.72
CDK18-208ENST00000476153 GRIN2AQ12879 1464 aa19.48■□□□□ 0.71
CDK18-208ENST00000476153 ADAMTS12P58397 1594 aa19.46■□□□□ 0.71
CDK18-208ENST00000476153 TRHP20396 242 aaPredicted RBP19.44■□□□□ 0.7
CDK18-208ENST00000476153 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
CDK18-208ENST00000476153 NUP160Q12769 1436 aa19.42■□□□□ 0.7
CDK18-208ENST00000476153 ERICH3Q5RHP9 1530 aa19.41■□□□□ 0.7
CDK18-208ENST00000476153 CEP170Q5SW79 1584 aa19.4■□□□□ 0.7
CDK18-208ENST00000476153 ERCC6L2Q5T890 1561 aa19.37■□□□□ 0.69
CDK18-208ENST00000476153 SHROOM2Q13796 1616 aa19.29■□□□□ 0.68
CDK18-208ENST00000476153 IGF1RP08069 1367 aa19.23■□□□□ 0.67
CDK18-208ENST00000476153 JPH4Q96JJ6 628 aa19.23■□□□□ 0.67
CDK18-208ENST00000476153 PRG4Q92954 1404 aaPredicted RBP19.23■□□□□ 0.67
CDK18-208ENST00000476153 KIF27Q86VH2 1401 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms