RNA–Protein interactions for RNA: ENST00000476111.5

USP22-204, Transcript of ubiquitin specific peptidase 22, humanhuman

TSL 3

Gene USP22, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-204ENST00000476111 NISCHQ9Y2I1 1504 aa46.27■■■■■ 5
USP22-204ENST00000476111 CCDC180Q9P1Z9 1646 aa41.4■■■■■ 4.22
USP22-204ENST00000476111 ABCC9O60706 1549 aa40.9■■■■■ 4.14
USP22-204ENST00000476111 RB1CC1Q8TDY2 1594 aa39.13■■■■□ 3.85
USP22-204ENST00000476111 NACADO15069 1562 aa39.01■■■■□ 3.84
USP22-204ENST00000476111 MYO15BQ96JP2 1530 aa38.71■■■■□ 3.79
USP22-204ENST00000476111 DCAF8L2P0C7V8 631 aa38.53■■■■□ 3.76
USP22-204ENST00000476111 ZCCHC6Q5VYS8 1495 aaKnown RBP38.46■■■■□ 3.75
USP22-204ENST00000476111 UNC13AQ9UPW8 1703 aa38.4■■■■□ 3.74
USP22-204ENST00000476111 DCAF1Q9Y4B6 1507 aa38.33■■■■□ 3.73
USP22-204ENST00000476111 DNAJC5BQ9UF47 199 aa38.18■■■■□ 3.7
USP22-204ENST00000476111 BICRAQ9NZM4 1560 aa38.14■■■■□ 3.7
USP22-204ENST00000476111 PABPN1Q86U42 306 aaKnown RBP eCLIP38.09■■■■□ 3.69
USP22-204ENST00000476111 SHROOM4Q9ULL8 1493 aa37.62■■■■□ 3.61
USP22-204ENST00000476111 SCRIBQ14160 1630 aa37.61■■■■□ 3.61
USP22-204ENST00000476111 EIF4G1Q04637 1599 aaKnown RBP37.07■■■■□ 3.52
USP22-204ENST00000476111 CC2D2AQ9P2K1 1620 aa37.05■■■■□ 3.52
USP22-204ENST00000476111 CECR2Q9BXF3 1484 aa36.83■■■■□ 3.49
USP22-204ENST00000476111 NCAPD3P42695 1498 aa36.05■■■■□ 3.36
USP22-204ENST00000476111 SMARCA4P51532 1647 aa36.01■■■■□ 3.36
USP22-204ENST00000476111 ATAD2BQ9ULI0 1458 aa35.96■■■■□ 3.35
USP22-204ENST00000476111 BAZ1AQ9NRL2 1556 aaPredicted RBP35.85■■■■□ 3.33
USP22-204ENST00000476111 SMARCA2P51531 1590 aa35.83■■■■□ 3.33
USP22-204ENST00000476111 HMGXB3Q12766 1538 aa35.8■■■■□ 3.32
USP22-204ENST00000476111 PEG3Q9GZU2 1588 aa35.76■■■■□ 3.32
USP22-204ENST00000476111 MROH2BQ7Z745 1585 aa35.65■■■■□ 3.3
USP22-204ENST00000476111 BAZ1BQ9UIG0 1483 aaKnown RBP35.54■■■■□ 3.28
USP22-204ENST00000476111 NESP48681 1621 aa35.3■■■■□ 3.24
USP22-204ENST00000476111 WIZO95785 1651 aa35.21■■■■□ 3.23
USP22-204ENST00000476111 ERCC6Q03468 1493 aa35.19■■■■□ 3.22
USP22-204ENST00000476111 CUX2O14529 1486 aa35.17■■■■□ 3.22
USP22-204ENST00000476111 LAMC3Q9Y6N6 1575 aa35.13■■■■□ 3.21
USP22-204ENST00000476111 RSF1Q96T23 1441 aaPredicted RBP35.04■■■■□ 3.2
USP22-204ENST00000476111 THOC2Q8NI27 1593 aaKnown RBP34.95■■■■□ 3.18
USP22-204ENST00000476111 CADPSQ9ULU8 1353 aa34.89■■■■□ 3.18
USP22-204ENST00000476111 KIF21AQ7Z4S6 1674 aa34.89■■■■□ 3.18
USP22-204ENST00000476111 PDS5BQ9NTI5 1447 aa34.83■■■■□ 3.17
USP22-204ENST00000476111 TOP2AP11388 1531 aaKnown RBP34.81■■■■□ 3.16
USP22-204ENST00000476111 DNAJC5Q9H3Z4 198 aa34.74■■■■□ 3.15
USP22-204ENST00000476111 CFTRP13569 1480 aa34.63■■■■□ 3.13
USP22-204ENST00000476111 MRC2Q9UBG0 1479 aa34.55■■■■□ 3.12
USP22-204ENST00000476111 WDR62O43379 1518 aa34.53■■■■□ 3.12
USP22-204ENST00000476111 FANCD2Q9BXW9 1451 aa34.47■■■■□ 3.11
USP22-204ENST00000476111 CEP164Q9UPV0 1460 aa34.46■■■■□ 3.11
USP22-204ENST00000476111 CCDC88BA6NC98 1476 aa34.4■■■■□ 3.1
USP22-204ENST00000476111 PRDM2Q13029 1718 aa34.34■■■■□ 3.09
USP22-204ENST00000476111 URB2Q14146 1524 aaKnown RBP34.24■■■■□ 3.07
USP22-204ENST00000476111 TOPBP1Q92547 1522 aa33.9■■■■□ 3.02
USP22-204ENST00000476111 ABCC8Q09428 1581 aa33.81■■■■□ 3
USP22-204ENST00000476111 DNMBPQ6XZF7 1577 aa33.81■■■■□ 3
USP22-204ENST00000476111 IFT140Q96RY7 1462 aa33.79■■■■□ 3
USP22-204ENST00000476111 ZNF608Q9ULD9 1512 aaPredicted RBP33.73■■■□□ 2.99
USP22-204ENST00000476111 TARBP1Q13395 1621 aaKnown RBP33.64■■■□□ 2.98
USP22-204ENST00000476111 POLA1P09884 1462 aaPredicted RBP33.59■■■□□ 2.97
USP22-204ENST00000476111 EIF4G3O43432 1585 aaKnown RBP33.55■■■□□ 2.96
USP22-204ENST00000476111 OSCARQ8IYS5 282 aa33.51■■■□□ 2.95
USP22-204ENST00000476111 SUPT5HO00267 1087 aaKnown RBP33.49■■■□□ 2.95
USP22-204ENST00000476111 CUX1P39880 1505 aa33.47■■■□□ 2.95
USP22-204ENST00000476111 AQRO60306 1485 aaKnown RBP eCLIP33.42■■■□□ 2.941e-7■■■■■ 27.2
USP22-204ENST00000476111 RAD54L2Q9Y4B4 1467 aa33.42■■■□□ 2.94
USP22-204ENST00000476111 FGD5Q6ZNL6 1462 aa33.39■■■□□ 2.94
USP22-204ENST00000476111 SOGA1O94964 1423 aa33.36■■■□□ 2.93
USP22-204ENST00000476111 WDR97A6NE52 1622 aa33.31■■■□□ 2.92
USP22-204ENST00000476111 CHD1O14646 1710 aa33.25■■■□□ 2.91
USP22-204ENST00000476111 TDRD9Q8NDG6 1382 aaKnown RBP33.24■■■□□ 2.91
USP22-204ENST00000476111 RIMBP3CA6NJZ7 1639 aa33.15■■■□□ 2.9
USP22-204ENST00000476111 RIMBP3BA6NNM3 1639 aa33.15■■■□□ 2.9
USP22-204ENST00000476111 RIMBP3Q9UFD9 1639 aa33.15■■■□□ 2.9
USP22-204ENST00000476111 TRIM41Q8WV44 630 aa33.13■■■□□ 2.89
USP22-204ENST00000476111 ABCA10Q8WWZ4 1543 aa33.09■■■□□ 2.89
USP22-204ENST00000476111 SNAPC4Q5SXM2 1469 aa33.09■■■□□ 2.89
USP22-204ENST00000476111 ARHGEF11O15085 1522 aa33.07■■■□□ 2.89
USP22-204ENST00000476111 BIVM-ERCC5R4GMW8 1640 aa33.06■■■□□ 2.88
USP22-204ENST00000476111 GRIN2BQ13224 1484 aa33.05■■■□□ 2.88
USP22-204ENST00000476111 MAGI1Q96QZ7 1491 aaPredicted RBP33.05■■■□□ 2.88
USP22-204ENST00000476111 TOP2BQ02880 1626 aa33.03■■■□□ 2.88
USP22-204ENST00000476111 ABCA5Q8WWZ7 1642 aa33.03■■■□□ 2.88
USP22-204ENST00000476111 SYNJ1O43426 1573 aa33■■■□□ 2.87
USP22-204ENST00000476111 PBRM1Q86U86 1689 aa32.99■■■□□ 2.87
USP22-204ENST00000476111 GAPVD1Q14C86 1478 aa32.98■■■□□ 2.87
USP22-204ENST00000476111 WRNQ14191 1432 aaPredicted RBP eCLIP32.96■■■□□ 2.87
USP22-204ENST00000476111 CLASP1Q7Z460 1538 aa32.94■■■□□ 2.86
USP22-204ENST00000476111 SYNJ2O15056 1496 aa32.93■■■□□ 2.86
USP22-204ENST00000476111 FBLN2P98095 1184 aa32.91■■■□□ 2.86
USP22-204ENST00000476111 CHMP7Q8WUX9 453 aaPredicted RBP32.81■■■□□ 2.84
USP22-204ENST00000476111 ARAP1Q96P48 1450 aa32.8■■■□□ 2.84
USP22-204ENST00000476111 ADAMTS12P58397 1594 aa32.72■■■□□ 2.83
USP22-204ENST00000476111 CYB5RLQ6IPT4 315 aa32.67■■■□□ 2.82
USP22-204ENST00000476111 ERICH3Q5RHP9 1530 aa32.67■■■□□ 2.82
USP22-204ENST00000476111 GRIN2AQ12879 1464 aa32.66■■■□□ 2.82
USP22-204ENST00000476111 NUP160Q12769 1436 aa32.6■■■□□ 2.81
USP22-204ENST00000476111 FHAD1B1AJZ9 1412 aa32.6■■■□□ 2.81
USP22-204ENST00000476111 CEP170Q5SW79 1584 aa32.57■■■□□ 2.8
USP22-204ENST00000476111 SHROOM2Q13796 1616 aa32.45■■■□□ 2.79
USP22-204ENST00000476111 ERCC6L2Q5T890 1561 aa32.42■■■□□ 2.78
USP22-204ENST00000476111 IGF1RP08069 1367 aa32.33■■■□□ 2.77
USP22-204ENST00000476111 KIF27Q86VH2 1401 aa32.29■■■□□ 2.76
USP22-204ENST00000476111 RUSC2Q8N2Y8 1516 aa32.26■■■□□ 2.75
USP22-204ENST00000476111 CUL7Q14999 1698 aa32.23■■■□□ 2.75
USP22-204ENST00000476111 JPH4Q96JJ6 628 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms