RNA–Protein interactions for RNA: ENST00000476012.5

MRPL43-210, Transcript of mitochondrial ribosomal protein L43, humanhuman

TSL 1 (best)

Gene MRPL43, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL43-210ENST00000476012 NISCHQ9Y2I1 1504 aa37.95■■■■□ 3.67
MRPL43-210ENST00000476012 ABCC9O60706 1549 aa33.94■■■■□ 3.02
MRPL43-210ENST00000476012 CCDC180Q9P1Z9 1646 aa33.92■■■■□ 3.02
MRPL43-210ENST00000476012 RB1CC1Q8TDY2 1594 aa32.29■■■□□ 2.76
MRPL43-210ENST00000476012 DCAF8L2P0C7V8 631 aa32.17■■■□□ 2.74
MRPL43-210ENST00000476012 NACADO15069 1562 aa32.09■■■□□ 2.73
MRPL43-210ENST00000476012 DNAJC5BQ9UF47 199 aa31.75■■■□□ 2.67
MRPL43-210ENST00000476012 PABPN1Q86U42 306 aaKnown RBP eCLIP31.68■■■□□ 2.66
MRPL43-210ENST00000476012 MYO15BQ96JP2 1530 aa31.65■■■□□ 2.66
MRPL43-210ENST00000476012 UNC13AQ9UPW8 1703 aa31.51■■■□□ 2.63
MRPL43-210ENST00000476012 ZCCHC6Q5VYS8 1495 aaKnown RBP31.45■■■□□ 2.62
MRPL43-210ENST00000476012 BICRAQ9NZM4 1560 aa31.33■■■□□ 2.61
MRPL43-210ENST00000476012 DCAF1Q9Y4B6 1507 aa31.3■■■□□ 2.6
MRPL43-210ENST00000476012 SCRIBQ14160 1630 aa31■■■□□ 2.55
MRPL43-210ENST00000476012 SHROOM4Q9ULL8 1493 aa30.88■■■□□ 2.53
MRPL43-210ENST00000476012 CC2D2AQ9P2K1 1620 aa30.61■■■□□ 2.49
MRPL43-210ENST00000476012 EIF4G1Q04637 1599 aaKnown RBP30.57■■■□□ 2.48
MRPL43-210ENST00000476012 CECR2Q9BXF3 1484 aa30.54■■■□□ 2.48
MRPL43-210ENST00000476012 NCAPD3P42695 1498 aa29.65■■■□□ 2.34
MRPL43-210ENST00000476012 ATAD2BQ9ULI0 1458 aa29.58■■■□□ 2.33
MRPL43-210ENST00000476012 SMARCA4P51532 1647 aa29.56■■■□□ 2.32
MRPL43-210ENST00000476012 SMARCA2P51531 1590 aa29.48■■■□□ 2.31
MRPL43-210ENST00000476012 BAZ1AQ9NRL2 1556 aaPredicted RBP29.43■■■□□ 2.3
MRPL43-210ENST00000476012 HMGXB3Q12766 1538 aa29.4■■■□□ 2.3
MRPL43-210ENST00000476012 BAZ1BQ9UIG0 1483 aaKnown RBP29.32■■■□□ 2.28
MRPL43-210ENST00000476012 ERCC6Q03468 1493 aa29.29■■■□□ 2.28
MRPL43-210ENST00000476012 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.27
MRPL43-210ENST00000476012 PEG3Q9GZU2 1588 aa29.23■■■□□ 2.27
MRPL43-210ENST00000476012 NESP48681 1621 aa29.17■■■□□ 2.26
MRPL43-210ENST00000476012 CUX2O14529 1486 aa29.13■■■□□ 2.25
MRPL43-210ENST00000476012 DNAJC5Q9H3Z4 198 aa29.06■■■□□ 2.24
MRPL43-210ENST00000476012 LAMC3Q9Y6N6 1575 aa28.93■■■□□ 2.22
MRPL43-210ENST00000476012 WIZO95785 1651 aa28.9■■■□□ 2.22
MRPL43-210ENST00000476012 PDS5BQ9NTI5 1447 aa28.82■■■□□ 2.2
MRPL43-210ENST00000476012 CADPSQ9ULU8 1353 aa28.78■■■□□ 2.2
MRPL43-210ENST00000476012 THOC2Q8NI27 1593 aaKnown RBP28.77■■■□□ 2.2
MRPL43-210ENST00000476012 KIF21AQ7Z4S6 1674 aa28.74■■■□□ 2.19
MRPL43-210ENST00000476012 RSF1Q96T23 1441 aaPredicted RBP28.71■■■□□ 2.19
MRPL43-210ENST00000476012 MRC2Q9UBG0 1479 aa28.53■■■□□ 2.16
MRPL43-210ENST00000476012 TOP2AP11388 1531 aaKnown RBP28.53■■■□□ 2.16
MRPL43-210ENST00000476012 CFTRP13569 1480 aa28.46■■■□□ 2.15
MRPL43-210ENST00000476012 CEP164Q9UPV0 1460 aa28.46■■■□□ 2.15
MRPL43-210ENST00000476012 FANCD2Q9BXW9 1451 aa28.45■■■□□ 2.14
MRPL43-210ENST00000476012 WDR62O43379 1518 aa28.43■■■□□ 2.14
MRPL43-210ENST00000476012 CCDC88BA6NC98 1476 aa28.25■■■□□ 2.11
MRPL43-210ENST00000476012 URB2Q14146 1524 aaKnown RBP28.19■■■□□ 2.1
MRPL43-210ENST00000476012 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
MRPL43-210ENST00000476012 OSCARQ8IYS5 282 aa27.93■■■□□ 2.06
MRPL43-210ENST00000476012 TRIM41Q8WV44 630 aa27.91■■■□□ 2.06
MRPL43-210ENST00000476012 TOPBP1Q92547 1522 aa27.91■■■□□ 2.06
MRPL43-210ENST00000476012 IFT140Q96RY7 1462 aa27.89■■■□□ 2.05
MRPL43-210ENST00000476012 ABCC8Q09428 1581 aa27.86■■■□□ 2.05
MRPL43-210ENST00000476012 ZNF608Q9ULD9 1512 aaPredicted RBP27.84■■■□□ 2.05
MRPL43-210ENST00000476012 DNMBPQ6XZF7 1577 aa27.79■■■□□ 2.04
MRPL43-210ENST00000476012 SUPT5HO00267 1087 aaKnown RBP27.66■■■□□ 2.02
MRPL43-210ENST00000476012 EIF4G3O43432 1585 aaKnown RBP27.65■■■□□ 2.02
MRPL43-210ENST00000476012 AQRO60306 1485 aaKnown RBP eCLIP27.64■■■□□ 2.015e-8■■■■□ 19.3
MRPL43-210ENST00000476012 POLA1P09884 1462 aaPredicted RBP27.64■■■□□ 2.01
MRPL43-210ENST00000476012 TARBP1Q13395 1621 aaKnown RBP27.63■■■□□ 2.01
MRPL43-210ENST00000476012 RAD54L2Q9Y4B4 1467 aa27.57■■■□□ 2
MRPL43-210ENST00000476012 SOGA1O94964 1423 aa27.56■■■□□ 2
MRPL43-210ENST00000476012 TDRD9Q8NDG6 1382 aaKnown RBP27.51■■□□□ 1.99
MRPL43-210ENST00000476012 FBLN2P98095 1184 aa27.51■■□□□ 1.99
MRPL43-210ENST00000476012 FGD5Q6ZNL6 1462 aa27.49■■□□□ 1.99
MRPL43-210ENST00000476012 CUX1P39880 1505 aa27.46■■□□□ 1.99
MRPL43-210ENST00000476012 RIMBP3CA6NJZ7 1639 aa27.45■■□□□ 1.99
MRPL43-210ENST00000476012 RIMBP3BA6NNM3 1639 aa27.45■■□□□ 1.99
MRPL43-210ENST00000476012 RIMBP3Q9UFD9 1639 aa27.45■■□□□ 1.99
MRPL43-210ENST00000476012 CHD1O14646 1710 aa27.41■■□□□ 1.98
MRPL43-210ENST00000476012 ARHGEF11O15085 1522 aa27.4■■□□□ 1.98
MRPL43-210ENST00000476012 SNAPC4Q5SXM2 1469 aa27.32■■□□□ 1.96
MRPL43-210ENST00000476012 WDR97A6NE52 1622 aa27.31■■□□□ 1.96
MRPL43-210ENST00000476012 CYB5RLQ6IPT4 315 aa27.3■■□□□ 1.96
MRPL43-210ENST00000476012 CHMP7Q8WUX9 453 aaPredicted RBP27.3■■□□□ 1.96
MRPL43-210ENST00000476012 GRIN2BQ13224 1484 aa27.27■■□□□ 1.96
MRPL43-210ENST00000476012 MAGI1Q96QZ7 1491 aaPredicted RBP27.23■■□□□ 1.95
MRPL43-210ENST00000476012 GAPVD1Q14C86 1478 aa27.2■■□□□ 1.95
MRPL43-210ENST00000476012 SYNJ2O15056 1496 aa27.16■■□□□ 1.94
MRPL43-210ENST00000476012 ABCA10Q8WWZ4 1543 aa27.16■■□□□ 1.94
MRPL43-210ENST00000476012 ARAP1Q96P48 1450 aa27.13■■□□□ 1.93
MRPL43-210ENST00000476012 WRNQ14191 1432 aaPredicted RBP eCLIP27.13■■□□□ 1.93
MRPL43-210ENST00000476012 SYNJ1O43426 1573 aa27.12■■□□□ 1.93
MRPL43-210ENST00000476012 PBRM1Q86U86 1689 aa27.11■■□□□ 1.93
MRPL43-210ENST00000476012 CLASP1Q7Z460 1538 aa27.1■■□□□ 1.93
MRPL43-210ENST00000476012 ABCA5Q8WWZ7 1642 aa27.08■■□□□ 1.93
MRPL43-210ENST00000476012 TOP2BQ02880 1626 aa27.05■■□□□ 1.92
MRPL43-210ENST00000476012 BIVM-ERCC5R4GMW8 1640 aa27.02■■□□□ 1.92
MRPL43-210ENST00000476012 TRHP20396 242 aaPredicted RBP26.98■■□□□ 1.91
MRPL43-210ENST00000476012 GRIN2AQ12879 1464 aa26.91■■□□□ 1.9
MRPL43-210ENST00000476012 ADAMTS12P58397 1594 aa26.87■■□□□ 1.89
MRPL43-210ENST00000476012 FHAD1B1AJZ9 1412 aa26.85■■□□□ 1.89
MRPL43-210ENST00000476012 ERICH3Q5RHP9 1530 aa26.81■■□□□ 1.88
MRPL43-210ENST00000476012 NUP160Q12769 1436 aa26.8■■□□□ 1.88
MRPL43-210ENST00000476012 CEP170Q5SW79 1584 aa26.8■■□□□ 1.88
MRPL43-210ENST00000476012 ERCC6L2Q5T890 1561 aa26.73■■□□□ 1.87
MRPL43-210ENST00000476012 SHROOM2Q13796 1616 aa26.63■■□□□ 1.85
MRPL43-210ENST00000476012 JPH4Q96JJ6 628 aa26.61■■□□□ 1.85
MRPL43-210ENST00000476012 PRG4Q92954 1404 aaPredicted RBP26.59■■□□□ 1.85
MRPL43-210ENST00000476012 KIF27Q86VH2 1401 aa26.58■■□□□ 1.85
MRPL43-210ENST00000476012 IGF1RP08069 1367 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms