RNA–Protein interactions for RNA: ENST00000476004.5

NUP214-207, Transcript of nucleoporin 214, humanhuman

TSL 3

Gene NUP214, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-207ENST00000476004 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
NUP214-207ENST00000476004 CCDC180Q9P1Z9 1646 aa34.02■■■■□ 3.04
NUP214-207ENST00000476004 ABCC9O60706 1549 aa34■■■■□ 3.03
NUP214-207ENST00000476004 RB1CC1Q8TDY2 1594 aa32.34■■■□□ 2.77
NUP214-207ENST00000476004 NACADO15069 1562 aa32.1■■■□□ 2.73
NUP214-207ENST00000476004 DNAJC5BQ9UF47 199 aa31.9■■■□□ 2.7
NUP214-207ENST00000476004 DCAF8L2P0C7V8 631 aa31.88■■■□□ 2.69
NUP214-207ENST00000476004 UNC13AQ9UPW8 1703 aa31.78■■■□□ 2.68
NUP214-207ENST00000476004 MYO15BQ96JP2 1530 aa31.63■■■□□ 2.65
NUP214-207ENST00000476004 PABPN1Q86U42 306 aaKnown RBP eCLIP31.62■■■□□ 2.65
NUP214-207ENST00000476004 BICRAQ9NZM4 1560 aa31.47■■■□□ 2.63
NUP214-207ENST00000476004 ZCCHC6Q5VYS8 1495 aaKnown RBP31.4■■■□□ 2.62
NUP214-207ENST00000476004 DCAF1Q9Y4B6 1507 aa31.24■■■□□ 2.59
NUP214-207ENST00000476004 SCRIBQ14160 1630 aa31.03■■■□□ 2.56
NUP214-207ENST00000476004 SHROOM4Q9ULL8 1493 aa30.92■■■□□ 2.54
NUP214-207ENST00000476004 CC2D2AQ9P2K1 1620 aa30.75■■■□□ 2.51
NUP214-207ENST00000476004 EIF4G1Q04637 1599 aaKnown RBP30.66■■■□□ 2.5
NUP214-207ENST00000476004 CECR2Q9BXF3 1484 aa30.6■■■□□ 2.49
NUP214-207ENST00000476004 NCAPD3P42695 1498 aa29.61■■■□□ 2.33
NUP214-207ENST00000476004 SMARCA4P51532 1647 aa29.58■■■□□ 2.33
NUP214-207ENST00000476004 ATAD2BQ9ULI0 1458 aa29.56■■■□□ 2.32
NUP214-207ENST00000476004 SMARCA2P51531 1590 aa29.46■■■□□ 2.31
NUP214-207ENST00000476004 HMGXB3Q12766 1538 aa29.44■■■□□ 2.3
NUP214-207ENST00000476004 BAZ1AQ9NRL2 1556 aaPredicted RBP29.38■■■□□ 2.29
NUP214-207ENST00000476004 ERCC6Q03468 1493 aa29.3■■■□□ 2.28
NUP214-207ENST00000476004 PEG3Q9GZU2 1588 aa29.26■■■□□ 2.28
NUP214-207ENST00000476004 BAZ1BQ9UIG0 1483 aaKnown RBP29.26■■■□□ 2.27
NUP214-207ENST00000476004 CUX2O14529 1486 aa29.25■■■□□ 2.27
NUP214-207ENST00000476004 NESP48681 1621 aa29.24■■■□□ 2.27
NUP214-207ENST00000476004 MROH2BQ7Z745 1585 aa29.22■■■□□ 2.27
NUP214-207ENST00000476004 DNAJC5Q9H3Z4 198 aa29.2■■■□□ 2.26
NUP214-207ENST00000476004 LAMC3Q9Y6N6 1575 aa28.98■■■□□ 2.23
NUP214-207ENST00000476004 THOC2Q8NI27 1593 aaKnown RBP28.97■■■□□ 2.23
NUP214-207ENST00000476004 KIF21AQ7Z4S6 1674 aa28.92■■■□□ 2.22
NUP214-207ENST00000476004 WIZO95785 1651 aa28.91■■■□□ 2.22
NUP214-207ENST00000476004 PDS5BQ9NTI5 1447 aa28.75■■■□□ 2.19
NUP214-207ENST00000476004 CADPSQ9ULU8 1353 aa28.71■■■□□ 2.19
NUP214-207ENST00000476004 MRC2Q9UBG0 1479 aa28.57■■■□□ 2.16
NUP214-207ENST00000476004 RSF1Q96T23 1441 aaPredicted RBP28.56■■■□□ 2.16
NUP214-207ENST00000476004 WDR62O43379 1518 aa28.53■■■□□ 2.16
NUP214-207ENST00000476004 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
NUP214-207ENST00000476004 CEP164Q9UPV0 1460 aa28.45■■■□□ 2.14
NUP214-207ENST00000476004 FANCD2Q9BXW9 1451 aa28.42■■■□□ 2.14
NUP214-207ENST00000476004 CFTRP13569 1480 aa28.4■■■□□ 2.14
NUP214-207ENST00000476004 PRDM2Q13029 1718 aa28.26■■■□□ 2.11
NUP214-207ENST00000476004 URB2Q14146 1524 aaKnown RBP28.23■■■□□ 2.11
NUP214-207ENST00000476004 CCDC88BA6NC98 1476 aa28.15■■■□□ 2.1
NUP214-207ENST00000476004 TRIM41Q8WV44 630 aa27.96■■■□□ 2.07
NUP214-207ENST00000476004 TOPBP1Q92547 1522 aa27.91■■■□□ 2.06
NUP214-207ENST00000476004 ZNF608Q9ULD9 1512 aaPredicted RBP27.88■■■□□ 2.05
NUP214-207ENST00000476004 IFT140Q96RY7 1462 aa27.85■■■□□ 2.05
NUP214-207ENST00000476004 OSCARQ8IYS5 282 aa27.85■■■□□ 2.05
NUP214-207ENST00000476004 DNMBPQ6XZF7 1577 aa27.81■■■□□ 2.04
NUP214-207ENST00000476004 EIF4G3O43432 1585 aaKnown RBP27.76■■■□□ 2.03
NUP214-207ENST00000476004 ABCC8Q09428 1581 aa27.75■■■□□ 2.03
NUP214-207ENST00000476004 TARBP1Q13395 1621 aaKnown RBP27.7■■■□□ 2.02
NUP214-207ENST00000476004 RIMBP3CA6NJZ7 1639 aa27.64■■■□□ 2.02
NUP214-207ENST00000476004 RIMBP3BA6NNM3 1639 aa27.64■■■□□ 2.02
NUP214-207ENST00000476004 RIMBP3Q9UFD9 1639 aa27.64■■■□□ 2.02
NUP214-207ENST00000476004 POLA1P09884 1462 aaPredicted RBP27.62■■■□□ 2.01
NUP214-207ENST00000476004 AQRO60306 1485 aaKnown RBP eCLIP27.6■■■□□ 2.011e-9■■■■■ 50.6
NUP214-207ENST00000476004 CHD1O14646 1710 aa27.59■■■□□ 2.01
NUP214-207ENST00000476004 RAD54L2Q9Y4B4 1467 aa27.53■■■□□ 2
NUP214-207ENST00000476004 ARHGEF11O15085 1522 aa27.51■■■□□ 2
NUP214-207ENST00000476004 CUX1P39880 1505 aa27.46■■□□□ 1.99
NUP214-207ENST00000476004 FGD5Q6ZNL6 1462 aa27.45■■□□□ 1.99
NUP214-207ENST00000476004 SOGA1O94964 1423 aa27.44■■□□□ 1.98
NUP214-207ENST00000476004 TDRD9Q8NDG6 1382 aaKnown RBP27.41■■□□□ 1.98
NUP214-207ENST00000476004 FBLN2P98095 1184 aa27.35■■□□□ 1.97
NUP214-207ENST00000476004 WDR97A6NE52 1622 aa27.34■■□□□ 1.97
NUP214-207ENST00000476004 SNAPC4Q5SXM2 1469 aa27.33■■□□□ 1.97
NUP214-207ENST00000476004 ARAP1Q96P48 1450 aa27.26■■□□□ 1.95
NUP214-207ENST00000476004 SUPT5HO00267 1087 aaKnown RBP27.26■■□□□ 1.95
NUP214-207ENST00000476004 CYB5RLQ6IPT4 315 aa27.24■■□□□ 1.95
NUP214-207ENST00000476004 PBRM1Q86U86 1689 aa27.23■■□□□ 1.95
NUP214-207ENST00000476004 CLASP1Q7Z460 1538 aa27.21■■□□□ 1.95
NUP214-207ENST00000476004 GRIN2BQ13224 1484 aa27.21■■□□□ 1.95
NUP214-207ENST00000476004 MAGI1Q96QZ7 1491 aaPredicted RBP27.21■■□□□ 1.95
NUP214-207ENST00000476004 SYNJ1O43426 1573 aa27.15■■□□□ 1.94
NUP214-207ENST00000476004 ABCA5Q8WWZ7 1642 aa27.14■■□□□ 1.94
NUP214-207ENST00000476004 SYNJ2O15056 1496 aa27.13■■□□□ 1.93
NUP214-207ENST00000476004 GAPVD1Q14C86 1478 aa27.13■■□□□ 1.93
NUP214-207ENST00000476004 CHMP7Q8WUX9 453 aaPredicted RBP27.12■■□□□ 1.93
NUP214-207ENST00000476004 ABCA10Q8WWZ4 1543 aa27.11■■□□□ 1.93
NUP214-207ENST00000476004 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
NUP214-207ENST00000476004 TOP2BQ02880 1626 aa26.99■■□□□ 1.91
NUP214-207ENST00000476004 WRNQ14191 1432 aaPredicted RBP eCLIP26.95■■□□□ 1.9
NUP214-207ENST00000476004 ADAMTS12P58397 1594 aa26.93■■□□□ 1.9
NUP214-207ENST00000476004 TRHP20396 242 aaPredicted RBP26.92■■□□□ 1.9
NUP214-207ENST00000476004 GRIN2AQ12879 1464 aa26.89■■□□□ 1.9
NUP214-207ENST00000476004 CEP170Q5SW79 1584 aa26.85■■□□□ 1.89
NUP214-207ENST00000476004 ERCC6L2Q5T890 1561 aa26.84■■□□□ 1.89
NUP214-207ENST00000476004 NUP160Q12769 1436 aa26.79■■□□□ 1.88
NUP214-207ENST00000476004 ERICH3Q5RHP9 1530 aa26.76■■□□□ 1.87
NUP214-207ENST00000476004 FHAD1B1AJZ9 1412 aa26.76■■□□□ 1.87
NUP214-207ENST00000476004 SHROOM2Q13796 1616 aa26.73■■□□□ 1.87
NUP214-207ENST00000476004 RUSC2Q8N2Y8 1516 aa26.55■■□□□ 1.84
NUP214-207ENST00000476004 PRG4Q92954 1404 aaPredicted RBP26.52■■□□□ 1.84
NUP214-207ENST00000476004 JPH4Q96JJ6 628 aa26.45■■□□□ 1.82
NUP214-207ENST00000476004 KIF13AQ9H1H9 1805 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms