RNA–Protein interactions for RNA: ENST00000475519.5

APOL1-212, Transcript of apolipoprotein L1, humanhuman

TSL 4

Gene APOL1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL1-212ENST00000475519 NISCHQ9Y2I1 1504 aa23.65■■□□□ 1.38
APOL1-212ENST00000475519 CCDC180Q9P1Z9 1646 aa21.21■□□□□ 0.99
APOL1-212ENST00000475519 ABCC9O60706 1549 aa21.17■□□□□ 0.98
APOL1-212ENST00000475519 RB1CC1Q8TDY2 1594 aa20.19■□□□□ 0.82
APOL1-212ENST00000475519 DCAF8L2P0C7V8 631 aa20.09■□□□□ 0.81
APOL1-212ENST00000475519 NACADO15069 1562 aa20.04■□□□□ 0.8
APOL1-212ENST00000475519 MYO15BQ96JP2 1530 aa19.73■□□□□ 0.75
APOL1-212ENST00000475519 PABPN1Q86U42 306 aaKnown RBP eCLIP19.71■□□□□ 0.75
APOL1-212ENST00000475519 UNC13AQ9UPW8 1703 aa19.67■□□□□ 0.74
APOL1-212ENST00000475519 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
APOL1-212ENST00000475519 ZCCHC6Q5VYS8 1495 aaKnown RBP19.62■□□□□ 0.73
APOL1-212ENST00000475519 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
APOL1-212ENST00000475519 BICRAQ9NZM4 1560 aa19.48■□□□□ 0.71
APOL1-212ENST00000475519 SCRIBQ14160 1630 aa19.39■□□□□ 0.69
APOL1-212ENST00000475519 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
APOL1-212ENST00000475519 CC2D2AQ9P2K1 1620 aa19.09■□□□□ 0.65
APOL1-212ENST00000475519 EIF4G1Q04637 1599 aaKnown RBP19.07■□□□□ 0.64
APOL1-212ENST00000475519 CECR2Q9BXF3 1484 aa19.05■□□□□ 0.64
APOL1-212ENST00000475519 SMARCA4P51532 1647 aa18.45■□□□□ 0.54
APOL1-212ENST00000475519 NCAPD3P42695 1498 aa18.45■□□□□ 0.54
APOL1-212ENST00000475519 SMARCA2P51531 1590 aa18.44■□□□□ 0.54
APOL1-212ENST00000475519 ATAD2BQ9ULI0 1458 aa18.44■□□□□ 0.54
APOL1-212ENST00000475519 BAZ1AQ9NRL2 1556 aaPredicted RBP18.4■□□□□ 0.54
APOL1-212ENST00000475519 HMGXB3Q12766 1538 aa18.36■□□□□ 0.53
APOL1-212ENST00000475519 ERCC6Q03468 1493 aa18.35■□□□□ 0.53
APOL1-212ENST00000475519 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.52
APOL1-212ENST00000475519 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
APOL1-212ENST00000475519 PEG3Q9GZU2 1588 aa18.21■□□□□ 0.51
APOL1-212ENST00000475519 CUX2O14529 1486 aa18.2■□□□□ 0.5
APOL1-212ENST00000475519 DNAJC5Q9H3Z4 198 aa18.16■□□□□ 0.5
APOL1-212ENST00000475519 NESP48681 1621 aa18.16■□□□□ 0.5
APOL1-212ENST00000475519 LAMC3Q9Y6N6 1575 aa18.08■□□□□ 0.49
APOL1-212ENST00000475519 WIZO95785 1651 aa18.03■□□□□ 0.48
APOL1-212ENST00000475519 PDS5BQ9NTI5 1447 aa18■□□□□ 0.47
APOL1-212ENST00000475519 KIF21AQ7Z4S6 1674 aa17.96■□□□□ 0.47
APOL1-212ENST00000475519 THOC2Q8NI27 1593 aaKnown RBP17.96■□□□□ 0.46
APOL1-212ENST00000475519 CADPSQ9ULU8 1353 aa17.93■□□□□ 0.46
APOL1-212ENST00000475519 RSF1Q96T23 1441 aaPredicted RBP17.87■□□□□ 0.45
APOL1-212ENST00000475519 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
APOL1-212ENST00000475519 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
APOL1-212ENST00000475519 CEP164Q9UPV0 1460 aa17.81■□□□□ 0.44
APOL1-212ENST00000475519 FANCD2Q9BXW9 1451 aa17.76■□□□□ 0.43
APOL1-212ENST00000475519 WDR62O43379 1518 aa17.74■□□□□ 0.43
APOL1-212ENST00000475519 CFTRP13569 1480 aa17.72■□□□□ 0.43
APOL1-212ENST00000475519 PRDM2Q13029 1718 aa17.61■□□□□ 0.41
APOL1-212ENST00000475519 CCDC88BA6NC98 1476 aa17.59■□□□□ 0.41
APOL1-212ENST00000475519 URB2Q14146 1524 aaKnown RBP17.56■□□□□ 0.4
APOL1-212ENST00000475519 TRIM41Q8WV44 630 aa17.42■□□□□ 0.38
APOL1-212ENST00000475519 IFT140Q96RY7 1462 aa17.42■□□□□ 0.38
APOL1-212ENST00000475519 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
APOL1-212ENST00000475519 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
APOL1-212ENST00000475519 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
APOL1-212ENST00000475519 DNMBPQ6XZF7 1577 aa17.37■□□□□ 0.37
APOL1-212ENST00000475519 ZNF608Q9ULD9 1512 aaPredicted RBP17.33■□□□□ 0.37
APOL1-212ENST00000475519 EIF4G3O43432 1585 aaKnown RBP17.28■□□□□ 0.36
APOL1-212ENST00000475519 SUPT5HO00267 1087 aaKnown RBP17.28■□□□□ 0.36
APOL1-212ENST00000475519 POLA1P09884 1462 aaPredicted RBP17.24■□□□□ 0.35
APOL1-212ENST00000475519 TARBP1Q13395 1621 aaKnown RBP17.21■□□□□ 0.35
APOL1-212ENST00000475519 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.353e-6■■■□□ 17
APOL1-212ENST00000475519 FBLN2P98095 1184 aa17.2■□□□□ 0.34
APOL1-212ENST00000475519 SOGA1O94964 1423 aa17.19■□□□□ 0.34
APOL1-212ENST00000475519 RAD54L2Q9Y4B4 1467 aa17.17■□□□□ 0.34
APOL1-212ENST00000475519 FGD5Q6ZNL6 1462 aa17.16■□□□□ 0.34
APOL1-212ENST00000475519 CHD1O14646 1710 aa17.15■□□□□ 0.34
APOL1-212ENST00000475519 RIMBP3CA6NJZ7 1639 aa17.14■□□□□ 0.33
APOL1-212ENST00000475519 RIMBP3BA6NNM3 1639 aa17.14■□□□□ 0.33
APOL1-212ENST00000475519 RIMBP3Q9UFD9 1639 aa17.14■□□□□ 0.33
APOL1-212ENST00000475519 TDRD9Q8NDG6 1382 aaKnown RBP17.13■□□□□ 0.33
APOL1-212ENST00000475519 CUX1P39880 1505 aa17.12■□□□□ 0.33
APOL1-212ENST00000475519 ARHGEF11O15085 1522 aa17.1■□□□□ 0.33
APOL1-212ENST00000475519 WDR97A6NE52 1622 aa17.1■□□□□ 0.33
APOL1-212ENST00000475519 SNAPC4Q5SXM2 1469 aa17.07■□□□□ 0.32
APOL1-212ENST00000475519 CHMP7Q8WUX9 453 aaPredicted RBP17.05■□□□□ 0.32
APOL1-212ENST00000475519 GRIN2BQ13224 1484 aa17.04■□□□□ 0.32
APOL1-212ENST00000475519 MAGI1Q96QZ7 1491 aaPredicted RBP17.02■□□□□ 0.32
APOL1-212ENST00000475519 CYB5RLQ6IPT4 315 aa17■□□□□ 0.31
APOL1-212ENST00000475519 SYNJ1O43426 1573 aa16.99■□□□□ 0.31
APOL1-212ENST00000475519 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
APOL1-212ENST00000475519 PBRM1Q86U86 1689 aa16.98■□□□□ 0.31
APOL1-212ENST00000475519 ABCA10Q8WWZ4 1543 aa16.96■□□□□ 0.3
APOL1-212ENST00000475519 SYNJ2O15056 1496 aa16.95■□□□□ 0.3
APOL1-212ENST00000475519 WRNQ14191 1432 aaPredicted RBP eCLIP16.95■□□□□ 0.3
APOL1-212ENST00000475519 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
APOL1-212ENST00000475519 ABCA5Q8WWZ7 1642 aa16.91■□□□□ 0.3
APOL1-212ENST00000475519 CLASP1Q7Z460 1538 aa16.9■□□□□ 0.3
APOL1-212ENST00000475519 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
APOL1-212ENST00000475519 BIVM-ERCC5R4GMW8 1640 aa16.88■□□□□ 0.29
APOL1-212ENST00000475519 TRHP20396 242 aaPredicted RBP16.87■□□□□ 0.29
APOL1-212ENST00000475519 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
APOL1-212ENST00000475519 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
APOL1-212ENST00000475519 FHAD1B1AJZ9 1412 aa16.78■□□□□ 0.28
APOL1-212ENST00000475519 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
APOL1-212ENST00000475519 CEP170Q5SW79 1584 aa16.71■□□□□ 0.27
APOL1-212ENST00000475519 NUP160Q12769 1436 aa16.7■□□□□ 0.26
APOL1-212ENST00000475519 ERCC6L2Q5T890 1561 aa16.64■□□□□ 0.25
APOL1-212ENST00000475519 KIF27Q86VH2 1401 aa16.62■□□□□ 0.25
APOL1-212ENST00000475519 SHROOM2Q13796 1616 aa16.6■□□□□ 0.25
APOL1-212ENST00000475519 PRG4Q92954 1404 aaPredicted RBP16.59■□□□□ 0.25
APOL1-212ENST00000475519 JPH4Q96JJ6 628 aa16.57■□□□□ 0.24
APOL1-212ENST00000475519 CUL7Q14999 1698 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms